RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 OAZ1P54368 228 aa14.41□□□□□ -0.1
USH1C-208ENST00000529563 SMAD3P84022 425 aaKnown RBP14.41□□□□□ -0.1
USH1C-208ENST00000529563 PPARAQ07869 468 aa14.41□□□□□ -0.1
USH1C-208ENST00000529563 CCDC174Q6PII3 467 aa14.41□□□□□ -0.1
USH1C-208ENST00000529563 ZNF467Q7Z7K2 595 aaPredicted RBP14.41□□□□□ -0.1
USH1C-208ENST00000529563 FAM160B2Q86V87 743 aa14.41□□□□□ -0.1
USH1C-208ENST00000529563 MKL1Q969V6 931 aa14.41□□□□□ -0.1
USH1C-208ENST00000529563 ABHD16BQ9H3Z7 469 aa14.41□□□□□ -0.1
USH1C-208ENST00000529563 ACAD9Q9H845 621 aa14.41□□□□□ -0.1
USH1C-208ENST00000529563 SYNPO2Q9UMS6 1093 aa14.41□□□□□ -0.1
USH1C-208ENST00000529563 STX8Q9UNK0 236 aa14.41□□□□□ -0.1
USH1C-208ENST00000529563 MYH4Q9Y623 1939 aa14.41□□□□□ -0.1
USH1C-208ENST00000529563 IGKV6D-41A0A0C4DH26 115 aa14.4□□□□□ -0.1
USH1C-208ENST00000529563 KIAA0355O15063 1070 aa14.4□□□□□ -0.1
USH1C-208ENST00000529563 ADAMTS4O75173 837 aa14.4□□□□□ -0.1
USH1C-208ENST00000529563 CCDC144BQ3MJ40 725 aa14.4□□□□□ -0.1
USH1C-208ENST00000529563 GNASQ5JWF2 1037 aa14.4□□□□□ -0.1
USH1C-208ENST00000529563 MAMDC4Q6UXC1 1216 aa14.4□□□□□ -0.1
USH1C-208ENST00000529563 ARMCX2Q7L311 632 aa14.4□□□□□ -0.1
USH1C-208ENST00000529563 NEDD1Q8NHV4 660 aa14.4□□□□□ -0.1
USH1C-208ENST00000529563 SEC62Q99442 399 aaKnown RBP14.4□□□□□ -0.1
USH1C-208ENST00000529563 CDX2Q99626 313 aaPredicted RBP14.4□□□□□ -0.1
USH1C-208ENST00000529563 SEMA6BQ9H3T3 888 aa14.4□□□□□ -0.1
USH1C-208ENST00000529563 TOMM22Q9NS69 142 aa14.4□□□□□ -0.1
USH1C-208ENST00000529563 DNAJC25-GNG10A0A024R161 153 aa14.39□□□□□ -0.11
USH1C-208ENST00000529563 TLR3O15455 904 aaKnown RBP14.39□□□□□ -0.11
USH1C-208ENST00000529563 RANBP6O60518 1105 aaKnown RBP14.39□□□□□ -0.11
USH1C-208ENST00000529563 ALAS1P13196 640 aa14.39□□□□□ -0.11
USH1C-208ENST00000529563 FOSL2P15408 326 aa14.39□□□□□ -0.11
USH1C-208ENST00000529563 MX1P20591 662 aa14.39□□□□□ -0.11
USH1C-208ENST00000529563 MCCP23508 829 aa14.39□□□□□ -0.11
USH1C-208ENST00000529563 MAFAQ8NHW3 353 aaPredicted RBP14.39□□□□□ -0.11
USH1C-208ENST00000529563 TOX2Q96NM4 488 aa14.39□□□□□ -0.11
USH1C-208ENST00000529563 RNF146Q9NTX7 359 aa14.39□□□□□ -0.11
USH1C-208ENST00000529563 GREB1LQ9C091 1923 aaPredicted RBP14.39□□□□□ -0.11
USH1C-208ENST00000529563 A0A0U1RQG5 324 aaPredicted RBP14.38□□□□□ -0.11
USH1C-208ENST00000529563 ASB14A6NK59 587 aa14.38□□□□□ -0.11
USH1C-208ENST00000529563 ASGR1P07306 291 aa14.38□□□□□ -0.11
USH1C-208ENST00000529563 ITGB8P26012 769 aa14.38□□□□□ -0.11
USH1C-208ENST00000529563 FAAP100Q0VG06 881 aa14.38□□□□□ -0.11
USH1C-208ENST00000529563 PPIGQ13427 754 aaKnown RBP eCLIP14.38□□□□□ -0.11
USH1C-208ENST00000529563 CCDC96Q2M329 555 aa14.38□□□□□ -0.11
USH1C-208ENST00000529563 ANKRD33Q7Z3H0 272 aa14.38□□□□□ -0.11
USH1C-208ENST00000529563 CCDC144CPQ8IYA2 1237 aa14.38□□□□□ -0.11
USH1C-208ENST00000529563 KLHDC9Q8NEP7 349 aa14.38□□□□□ -0.11
USH1C-208ENST00000529563 STAG1Q8WVM7 1258 aa14.38□□□□□ -0.11
USH1C-208ENST00000529563 MYLIPQ8WY64 445 aa14.38□□□□□ -0.11
USH1C-208ENST00000529563 TRERF1Q96PN7 1200 aa14.38□□□□□ -0.11
USH1C-208ENST00000529563 PCDHB15Q9Y5E8 787 aa14.38□□□□□ -0.11
USH1C-208ENST00000529563 ELP1O95163 1332 aa14.38□□□□□ -0.11
USH1C-208ENST00000529563 CUL9Q8IWT3 2517 aa14.38□□□□□ -0.11
USH1C-208ENST00000529563 PLIN4Q96Q06 1357 aa14.37□□□□□ -0.11
USH1C-208ENST00000529563 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.37□□□□□ -0.11
USH1C-208ENST00000529563 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.37□□□□□ -0.11
USH1C-208ENST00000529563 MYADML2A6NDP7 307 aa14.37□□□□□ -0.11
USH1C-208ENST00000529563 ZEB2O60315 1214 aa14.37□□□□□ -0.11
USH1C-208ENST00000529563 TIMP1P01033 207 aa14.37□□□□□ -0.11
USH1C-208ENST00000529563 CNTN2Q02246 1040 aa14.37□□□□□ -0.11
USH1C-208ENST00000529563 TNFAIP2Q03169 654 aa14.37□□□□□ -0.11
USH1C-208ENST00000529563 CTDSPL2Q05D32 466 aa14.37□□□□□ -0.11
USH1C-208ENST00000529563 TKFCQ3LXA3 575 aa14.37□□□□□ -0.11
USH1C-208ENST00000529563 ZMYM1Q5SVZ6 1142 aa14.37□□□□□ -0.11
USH1C-208ENST00000529563 CCDC129Q6ZRS4 1044 aa14.37□□□□□ -0.11
USH1C-208ENST00000529563 KCTD1Q719H9 257 aa14.37□□□□□ -0.11
USH1C-208ENST00000529563 TMEM199Q8N511 208 aa14.37□□□□□ -0.11
USH1C-208ENST00000529563 GMCL1Q96IK5 515 aa14.37□□□□□ -0.11
USH1C-208ENST00000529563 AGBL1Q96MI9 1066 aa14.37□□□□□ -0.11
USH1C-208ENST00000529563 AP5M1Q9H0R1 490 aa14.37□□□□□ -0.11
USH1C-208ENST00000529563 ARVCFO00192 962 aa14.36□□□□□ -0.11
USH1C-208ENST00000529563 CST5P28325 142 aaPredicted RBP14.36□□□□□ -0.11
USH1C-208ENST00000529563 EPHB4P54760 987 aa14.36□□□□□ -0.11
USH1C-208ENST00000529563 GJA9P57773 515 aa14.36□□□□□ -0.11
USH1C-208ENST00000529563 RRP12Q5JTH9 1297 aaKnown RBP14.36□□□□□ -0.11
USH1C-208ENST00000529563 ANKRD45Q5TZF3 282 aa14.36□□□□□ -0.11
USH1C-208ENST00000529563 NSMFQ6X4W1 530 aa14.36□□□□□ -0.11
USH1C-208ENST00000529563 PI4K2BQ8TCG2 481 aa14.36□□□□□ -0.11
USH1C-208ENST00000529563 OTUD7AQ8TE49 926 aaPredicted RBP14.36□□□□□ -0.11
USH1C-208ENST00000529563 PPP1R12CQ9BZL4 782 aa14.36□□□□□ -0.11
USH1C-208ENST00000529563 CCPG1Q9ULG6 757 aa14.36□□□□□ -0.11
USH1C-208ENST00000529563 A0A0C4DFX4 3053 aa14.35□□□□□ -0.11
USH1C-208ENST00000529563 TMEM265A0A087WTH1 108 aa14.35□□□□□ -0.11
USH1C-208ENST00000529563 SNAP25P60880 206 aa14.35□□□□□ -0.11
USH1C-208ENST00000529563 BEX3Q00994 111 aa14.35□□□□□ -0.11
USH1C-208ENST00000529563 RCSD1Q6JBY9 416 aa14.35□□□□□ -0.11
USH1C-208ENST00000529563 MFSD5Q6N075 450 aa14.35□□□□□ -0.11
USH1C-208ENST00000529563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.35□□□□□ -0.11
USH1C-208ENST00000529563 UPF3AQ9H1J1 476 aaKnown RBP14.35□□□□□ -0.11
USH1C-208ENST00000529563 TTYH1Q9H313 450 aaPredicted RBP14.35□□□□□ -0.11
USH1C-208ENST00000529563 A1CFQ9NQ94 594 aaKnown RBP14.35□□□□□ -0.11
USH1C-208ENST00000529563 DNAJB2P25686 324 aa14.34□□□□□ -0.11
USH1C-208ENST00000529563 IRX5P78411 483 aaPredicted RBP14.34□□□□□ -0.11
USH1C-208ENST00000529563 HDAC1Q13547 482 aaPredicted RBP14.34□□□□□ -0.11
USH1C-208ENST00000529563 CCSAPQ6IQ19 270 aaPredicted RBP14.34□□□□□ -0.11
USH1C-208ENST00000529563 EEPD1Q7L9B9 569 aa14.34□□□□□ -0.11
USH1C-208ENST00000529563 TLK2Q86UE8 772 aa14.34□□□□□ -0.11
USH1C-208ENST00000529563 EVI5LQ96CN4 794 aa14.34□□□□□ -0.11
USH1C-208ENST00000529563 COL25A1Q9BXS0 654 aaPredicted RBP14.34□□□□□ -0.11
USH1C-208ENST00000529563 MTIF3Q9H2K0 278 aaKnown RBP14.34□□□□□ -0.11
USH1C-208ENST00000529563 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.33□□□□□ -0.12
USH1C-208ENST00000529563 DYNC1LI2O43237 492 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms