RNA–Protein interactions for RNA: ENST00000529477.5

PTP4A2-212, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-212ENST00000529477 LRCH3Q96II8 777 aa22.37■■□□□ 1.17
PTP4A2-212ENST00000529477 PPP4R2Q9NY27 417 aa22.37■■□□□ 1.17
PTP4A2-212ENST00000529477 PRR12Q9ULL5 1215 aa22.37■■□□□ 1.17
PTP4A2-212ENST00000529477 ERICH2A1L162 156 aa22.36■■□□□ 1.17
PTP4A2-212ENST00000529477 CDC45O75419 566 aa22.36■■□□□ 1.17
PTP4A2-212ENST00000529477 SART3Q15020 963 aaKnown RBP22.36■■□□□ 1.17
PTP4A2-212ENST00000529477 GPATCH4Q5T3I0 446 aaKnown RBP22.36■■□□□ 1.17
PTP4A2-212ENST00000529477 OLFML2BQ68BL8 750 aa22.36■■□□□ 1.17
PTP4A2-212ENST00000529477 CHST13Q8NET6 341 aa22.36■■□□□ 1.17
PTP4A2-212ENST00000529477 NCOA7Q8NI08 942 aa22.36■■□□□ 1.17
PTP4A2-212ENST00000529477 GPCPD1Q9NPB8 672 aa22.36■■□□□ 1.17
PTP4A2-212ENST00000529477 ANO2Q9NQ90 1003 aa22.36■■□□□ 1.17
PTP4A2-212ENST00000529477 FRMPD2Q68DX3 1309 aaPredicted RBP22.35■■□□□ 1.17
PTP4A2-212ENST00000529477 COBLO75128 1261 aa22.35■■□□□ 1.17
PTP4A2-212ENST00000529477 IFIT1BQ5T764 474 aaKnown RBP22.35■■□□□ 1.17
PTP4A2-212ENST00000529477 SYDE2Q5VT97 1194 aa22.35■■□□□ 1.17
PTP4A2-212ENST00000529477 RASGRP2Q7LDG7 609 aa22.35■■□□□ 1.17
PTP4A2-212ENST00000529477 ENAHQ8N8S7 591 aaPredicted RBP22.35■■□□□ 1.17
PTP4A2-212ENST00000529477 ANKS1AQ92625 1134 aa22.35■■□□□ 1.17
PTP4A2-212ENST00000529477 PLXNA1Q9UIW2 1896 aa22.34■■□□□ 1.17
PTP4A2-212ENST00000529477 E7EWF7 191 aa22.34■■□□□ 1.17
PTP4A2-212ENST00000529477 ZNF543Q08ER8 600 aa22.34■■□□□ 1.17
PTP4A2-212ENST00000529477 TKFCQ3LXA3 575 aa22.34■■□□□ 1.17
PTP4A2-212ENST00000529477 CCDC174Q6PII3 467 aa22.34■■□□□ 1.17
PTP4A2-212ENST00000529477 BTNL9Q6UXG8 535 aa22.34■■□□□ 1.17
PTP4A2-212ENST00000529477 ANKRD35Q8N283 1001 aa22.34■■□□□ 1.17
PTP4A2-212ENST00000529477 HOMER2Q9NSB8 354 aa22.34■■□□□ 1.17
PTP4A2-212ENST00000529477 FLRT1Q9NZU1 646 aa22.34■■□□□ 1.17
PTP4A2-212ENST00000529477 PNMA2Q9UL42 364 aa22.34■■□□□ 1.17
PTP4A2-212ENST00000529477 DIS3Q9Y2L1 958 aaKnown RBP22.34■■□□□ 1.17
PTP4A2-212ENST00000529477 RIPK3Q9Y572 518 aa22.34■■□□□ 1.17
PTP4A2-212ENST00000529477 UNC80Q8N2C7 3258 aa22.33■■□□□ 1.17
PTP4A2-212ENST00000529477 PGK2P07205 417 aa22.33■■□□□ 1.17
PTP4A2-212ENST00000529477 SNHG28P0DPA3 235 aa22.33■■□□□ 1.17
PTP4A2-212ENST00000529477 CNGA1P29973 690 aa22.33■■□□□ 1.17
PTP4A2-212ENST00000529477 CYP2C19P33261 490 aa22.33■■□□□ 1.17
PTP4A2-212ENST00000529477 BMP8BP34820 402 aa22.33■■□□□ 1.17
PTP4A2-212ENST00000529477 SLC16A2P36021 539 aa22.33■■□□□ 1.17
PTP4A2-212ENST00000529477 TTBK2Q6IQ55 1244 aa22.33■■□□□ 1.17
PTP4A2-212ENST00000529477 GPR153Q6NV75 609 aa22.33■■□□□ 1.17
PTP4A2-212ENST00000529477 MAML3Q96JK9 1138 aa22.33■■□□□ 1.17
PTP4A2-212ENST00000529477 GDF15Q99988 308 aa22.33■■□□□ 1.17
PTP4A2-212ENST00000529477 LSG1Q9H089 658 aaKnown RBP22.33■■□□□ 1.17
PTP4A2-212ENST00000529477 ACAD9Q9H845 621 aa22.33■■□□□ 1.17
PTP4A2-212ENST00000529477 MSCO60682 206 aa22.32■■□□□ 1.16
PTP4A2-212ENST00000529477 ALAS1P13196 640 aa22.32■■□□□ 1.16
PTP4A2-212ENST00000529477 RNF20Q5VTR2 975 aa22.32■■□□□ 1.16
PTP4A2-212ENST00000529477 PAWRQ96IZ0 340 aaKnown RBP22.32■■□□□ 1.16
PTP4A2-212ENST00000529477 RNF146Q9NTX7 359 aa22.32■■□□□ 1.16
PTP4A2-212ENST00000529477 CCPG1Q9ULG6 757 aa22.32■■□□□ 1.16
PTP4A2-212ENST00000529477 IFIT3O14879 490 aaKnown RBP22.31■■□□□ 1.16
PTP4A2-212ENST00000529477 ICAM1P05362 532 aa22.31■■□□□ 1.16
PTP4A2-212ENST00000529477 CCND3P30281 292 aaPredicted RBP22.31■■□□□ 1.16
PTP4A2-212ENST00000529477 MNX1P50219 401 aaPredicted RBP22.31■■□□□ 1.16
PTP4A2-212ENST00000529477 ASPRV1Q53RT3 343 aa22.31■■□□□ 1.16
PTP4A2-212ENST00000529477 CYB5R4Q7L1T6 521 aa22.31■■□□□ 1.16
PTP4A2-212ENST00000529477 ANKLE1Q8NAG6 615 aa22.31■■□□□ 1.16
PTP4A2-212ENST00000529477 AGBL1Q96MI9 1066 aa22.31■■□□□ 1.16
PTP4A2-212ENST00000529477 TRERF1Q96PN7 1200 aa22.31■■□□□ 1.16
PTP4A2-212ENST00000529477 RANBP17Q9H2T7 1088 aaKnown RBP22.31■■□□□ 1.16
PTP4A2-212ENST00000529477 ZNF536O15090 1300 aa22.31■■□□□ 1.16
PTP4A2-212ENST00000529477 PARP1P09874 1014 aaKnown RBP22.3■■□□□ 1.16
PTP4A2-212ENST00000529477 SNAP25P60880 206 aa22.3■■□□□ 1.16
PTP4A2-212ENST00000529477 ZNF792Q3KQV3 632 aa22.3■■□□□ 1.16
PTP4A2-212ENST00000529477 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.3■■□□□ 1.164e-9■□□□□ 8.8
PTP4A2-212ENST00000529477 NECAB2Q7Z6G3 386 aa22.3■■□□□ 1.16
PTP4A2-212ENST00000529477 DIS3LQ8TF46 1054 aaKnown RBP22.3■■□□□ 1.16
PTP4A2-212ENST00000529477 TINF2Q9BSI4 451 aa22.29■■□□□ 1.16
PTP4A2-212ENST00000529477 PFASO15067 1338 aa22.29■■□□□ 1.16
PTP4A2-212ENST00000529477 SLC27A2O14975 620 aa22.28■■□□□ 1.16
PTP4A2-212ENST00000529477 DHX16O60231 1041 aaKnown RBP22.28■■□□□ 1.16
PTP4A2-212ENST00000529477 GOLGA8HP0CJ92 632 aa22.28■■□□□ 1.16
PTP4A2-212ENST00000529477 CYBAP13498 195 aa22.28■■□□□ 1.16
PTP4A2-212ENST00000529477 WTAPQ15007 396 aa22.28■■□□□ 1.16
PTP4A2-212ENST00000529477 SEC23AQ15436 765 aa22.28■■□□□ 1.16
PTP4A2-212ENST00000529477 MSL3Q8N5Y2 521 aaKnown RBP22.28■■□□□ 1.16
PTP4A2-212ENST00000529477 DDX20Q9UHI6 824 aaKnown RBP22.28■■□□□ 1.16
PTP4A2-212ENST00000529477 NRBP1Q9UHY1 535 aa22.28■■□□□ 1.16
PTP4A2-212ENST00000529477 CNPY2Q9Y2B0 182 aa22.28■■□□□ 1.16
PTP4A2-212ENST00000529477 DNAJC25-GNG10A0A024R161 153 aa22.27■■□□□ 1.16
PTP4A2-212ENST00000529477 POTEB2H3BUK9 544 aa22.27■■□□□ 1.16
PTP4A2-212ENST00000529477 TMEM67Q5HYA8 995 aa22.27■■□□□ 1.16
PTP4A2-212ENST00000529477 CREB3L3Q68CJ9 461 aa22.27■■□□□ 1.16
PTP4A2-212ENST00000529477 STOX1Q6ZVD7 989 aa22.27■■□□□ 1.16
PTP4A2-212ENST00000529477 OGDHLQ9ULD0 1010 aa22.27■■□□□ 1.16
PTP4A2-212ENST00000529477 TAF6LQ9Y6J9 622 aa22.27■■□□□ 1.16
PTP4A2-212ENST00000529477 IGHA2P01877 340 aa22.26■■□□□ 1.15
PTP4A2-212ENST00000529477 MCM5P33992 734 aa22.26■■□□□ 1.15
PTP4A2-212ENST00000529477 NECTIN1Q15223 517 aa22.26■■□□□ 1.15
PTP4A2-212ENST00000529477 ZNF467Q7Z7K2 595 aaPredicted RBP22.26■■□□□ 1.15
PTP4A2-212ENST00000529477 UBA5Q9GZZ9 404 aa22.26■■□□□ 1.15
PTP4A2-212ENST00000529477 LAMA2P24043 3122 aaKnown RBP22.26■■□□□ 1.15
PTP4A2-212ENST00000529477 SEPT4O43236 478 aa22.25■■□□□ 1.15
PTP4A2-212ENST00000529477 LRIT3Q3SXY7 679 aa22.25■■□□□ 1.15
PTP4A2-212ENST00000529477 NSMFQ6X4W1 530 aa22.25■■□□□ 1.15
PTP4A2-212ENST00000529477 CHST3Q7LGC8 479 aa22.25■■□□□ 1.15
PTP4A2-212ENST00000529477 CATIPQ7Z7H3 387 aa22.25■■□□□ 1.15
PTP4A2-212ENST00000529477 MB21D2Q8IYB1 491 aaPredicted RBP22.25■■□□□ 1.15
PTP4A2-212ENST00000529477 C7orf61Q8IZ16 206 aa22.25■■□□□ 1.15
PTP4A2-212ENST00000529477 MTA3Q9BTC8 594 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms