RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 KLRC3Q07444 240 aa7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 HDAC1Q13547 482 aaPredicted RBP7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 SBK1Q52WX2 424 aa7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 C20orf194Q5TEA3 1177 aa7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 B4GALNT3Q6L9W6 998 aa7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 MFSD5Q6N075 450 aa7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 AMOTL1Q8IY63 956 aa7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 NUP133Q8WUM0 1156 aa7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 SYMPKQ92797 1274 aaKnown RBP7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 STRBPQ96SI9 672 aaKnown RBP7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 NUP88Q99567 741 aaPredicted RBP7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 SLF1Q9BQI6 1058 aa7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 BCL11AQ9H165 835 aa7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 RWDD1Q9H446 243 aaPredicted RBP7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 ZNF576Q9H609 170 aa7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 PRDM6Q9NQX0 595 aa7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 NYAP2Q9P242 653 aa7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 TBX21Q9UL17 535 aa7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 PCDHB8Q9UN66 801 aa7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 CNPY2Q9Y2B0 182 aa7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 SYNGAP1Q96PV0 1343 aa7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 SYNRGQ9UMZ2 1314 aa7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 MYH4Q9Y623 1939 aa7.42□□□□□ -1.22
CHRNA6-202ENST00000529467 IGKV6D-41A0A0C4DH26 115 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 GSG1L2A8MUP6 293 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 ADCY6O43306 1168 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 RAD21O60216 631 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 HMMRO75330 724 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 RASA1P20936 1047 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 DNAJB2P25686 324 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 CST5P28325 142 aaPredicted RBP7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 NKX3-2P78367 333 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 ACVR2BQ13705 512 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 TMEM240Q5SV17 173 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 RASIP1Q5U651 963 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 SNRNP48Q6IEG0 339 aaKnown RBP7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 PRPF38AQ8NAV1 312 aaKnown RBP7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 USP38Q8NB14 1042 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 MKL1Q969V6 931 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 DDX11Q96FC9 970 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 DDRGK1Q96HY6 314 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 FGD4Q96M96 766 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 TEX13BQ9BXU2 312 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 COG6Q9Y2V7 657 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 ELP1O95163 1332 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 PRUNE2Q8WUY3 3088 aa7.41□□□□□ -1.22
CHRNA6-202ENST00000529467 GRXCR1A8MXD5 290 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 ARVCFO00192 962 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 CTAGE5O15320 804 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 ZBED4O75132 1171 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 NDUFB10O96000 172 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 ASGR1P07306 291 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 GJA9P57773 515 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 CCDC144BQ3MJ40 725 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 ZSCAN25Q6NSZ9 544 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 GIMAP6Q6P9H5 292 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 CPXCR1Q8N123 301 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 STK11IPQ8N1F8 1099 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 PCSK9Q8NBP7 692 aaKnown RBP7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 TIFAQ96CG3 184 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 GLT1D1Q96MS3 346 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 PBX4Q9BYU1 374 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 KATNBL1Q9H079 304 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 UPF3AQ9H1J1 476 aaKnown RBP7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 ABHD16BQ9H3Z7 469 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 MKNK2Q9HBH9 465 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 SLC38A10Q9HBR0 1119 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 RAVER2Q9HCJ3 691 aaKnown RBP7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 ARPP21Q9UBL0 812 aaPredicted RBP7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 CLIP2Q9UDT6 1046 aa7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 ZHX1Q9UKY1 873 aaPredicted RBP7.4□□□□□ -1.22
CHRNA6-202ENST00000529467 EYSQ5T1H1 3165 aa7.4□□□□□ -1.23
CHRNA6-202ENST00000529467 MROH7Q68CQ1 1323 aa7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 A0A0U1RQG5 324 aaPredicted RBP7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 MINDY4BA8MYZ0 360 aa7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 SMARCA5O60264 1052 aaPredicted RBP7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 CD4P01730 458 aa7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 C6orf222P0C671 652 aaPredicted RBP7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 ACRP10323 421 aa7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 CSF2RAP15509 400 aa7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 PBX2P40425 430 aa7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 SLC4A3P48751 1232 aa7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 PPIGQ13427 754 aaKnown RBP eCLIP7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 TJAP1Q5JTD0 557 aa7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 GNASQ5JWF2 1037 aa7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 ZNF365Q70YC5 407 aa7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 ARMCX2Q7L311 632 aa7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 FAM126BQ8IXS8 530 aa7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 ANKRD35Q8N283 1001 aa7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 TMEM199Q8N511 208 aa7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 PDCD7Q8N8D1 485 aaKnown RBP7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 SLC43A3Q8NBI5 491 aa7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 CHST13Q8NET6 341 aa7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 OSBP2Q969R2 916 aa7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 KIFC2Q96AC6 838 aa7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 VTI1AQ96AJ9 217 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms