RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 ZNF444Q8N0Y2 327 aaPredicted RBP16.14■□□□□ 0.17
HIF3A-212ENST00000529205 PANK1Q8TE04 598 aa16.14■□□□□ 0.17
HIF3A-212ENST00000529205 SEZ6LQ9BYH1 1024 aa16.14■□□□□ 0.17
HIF3A-212ENST00000529205 UPF3AQ9H1J1 476 aaKnown RBP16.14■□□□□ 0.17
HIF3A-212ENST00000529205 RAVER2Q9HCJ3 691 aaKnown RBP16.14■□□□□ 0.17
HIF3A-212ENST00000529205 IL23AQ9NPF7 189 aa16.14■□□□□ 0.17
HIF3A-212ENST00000529205 MINDY4BA8MYZ0 360 aa16.13■□□□□ 0.17
HIF3A-212ENST00000529205 ZEB2O60315 1214 aa16.13■□□□□ 0.17
HIF3A-212ENST00000529205 NDUFB10O96000 172 aa16.13■□□□□ 0.17
HIF3A-212ENST00000529205 FDX1P10109 184 aa16.13■□□□□ 0.17
HIF3A-212ENST00000529205 GIMAP6Q6P9H5 292 aa16.13■□□□□ 0.17
HIF3A-212ENST00000529205 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.13■□□□□ 0.17
HIF3A-212ENST00000529205 ARMCX2Q7L311 632 aa16.13■□□□□ 0.17
HIF3A-212ENST00000529205 STK11IPQ8N1F8 1099 aa16.13■□□□□ 0.17
HIF3A-212ENST00000529205 HERVK_113Q902F9 699 aa16.13■□□□□ 0.17
HIF3A-212ENST00000529205 PUS7LQ9H0K6 701 aaKnown RBP16.13■□□□□ 0.17
HIF3A-212ENST00000529205 RASA1P20936 1047 aa16.12■□□□□ 0.17
HIF3A-212ENST00000529205 HNRNPUQ00839 825 aaKnown RBP eCLIP16.12■□□□□ 0.17
HIF3A-212ENST00000529205 TNFAIP2Q03169 654 aa16.12■□□□□ 0.17
HIF3A-212ENST00000529205 CCDC85BQ15834 202 aaPredicted RBP16.12■□□□□ 0.17
HIF3A-212ENST00000529205 CCDC144CPQ8IYA2 1237 aa16.12■□□□□ 0.17
HIF3A-212ENST00000529205 RPUSD2Q8IZ73 545 aaKnown RBP16.12■□□□□ 0.17
HIF3A-212ENST00000529205 ADAMTS19Q8TE59 1207 aa16.12■□□□□ 0.17
HIF3A-212ENST00000529205 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.12■□□□□ 0.17
HIF3A-212ENST00000529205 AP5M1Q9H0R1 490 aa16.12■□□□□ 0.17
HIF3A-212ENST00000529205 HIPK3Q9H422 1215 aa16.12■□□□□ 0.17
HIF3A-212ENST00000529205 SLC38A10Q9HBR0 1119 aa16.12■□□□□ 0.17
HIF3A-212ENST00000529205 ISY1Q9ULR0 285 aaKnown RBP16.12■□□□□ 0.17
HIF3A-212ENST00000529205 DDX19BQ9UMR2 479 aa16.12■□□□□ 0.17
HIF3A-212ENST00000529205 SYNPO2Q9UMS6 1093 aa16.12■□□□□ 0.17
HIF3A-212ENST00000529205 LAMA2P24043 3122 aaKnown RBP16.12■□□□□ 0.17
HIF3A-212ENST00000529205 ASB14A6NK59 587 aa16.11■□□□□ 0.17
HIF3A-212ENST00000529205 CD4P01730 458 aa16.11■□□□□ 0.17
HIF3A-212ENST00000529205 CYP2C18P33260 490 aa16.11■□□□□ 0.17
HIF3A-212ENST00000529205 IRX5P78411 483 aaPredicted RBP16.11■□□□□ 0.17
HIF3A-212ENST00000529205 UHRF1Q96T88 793 aaPredicted RBP16.11■□□□□ 0.17
HIF3A-212ENST00000529205 NKX2-4Q9H2Z4 354 aa16.11■□□□□ 0.17
HIF3A-212ENST00000529205 ACAD9Q9H845 621 aa16.11■□□□□ 0.17
HIF3A-212ENST00000529205 BAZ2AQ9UIF9 1905 aaKnown RBP16.11■□□□□ 0.17
HIF3A-212ENST00000529205 TTLL1O95922 423 aa16.1■□□□□ 0.17
HIF3A-212ENST00000529205 GNAT2P19087 354 aa16.1■□□□□ 0.17
HIF3A-212ENST00000529205 NKX3-2P78367 333 aa16.1■□□□□ 0.17
HIF3A-212ENST00000529205 ITGA7Q13683 1181 aa16.1■□□□□ 0.17
HIF3A-212ENST00000529205 AAK1Q2M2I8 961 aa16.1■□□□□ 0.17
HIF3A-212ENST00000529205 MKL1Q969V6 931 aa16.1■□□□□ 0.17
HIF3A-212ENST00000529205 STRBPQ96SI9 672 aaKnown RBP16.1■□□□□ 0.17
HIF3A-212ENST00000529205 HOMER2Q9NSB8 354 aa16.1■□□□□ 0.17
HIF3A-212ENST00000529205 COG6Q9Y2V7 657 aa16.1■□□□□ 0.17
HIF3A-212ENST00000529205 EYSQ5T1H1 3165 aa16.1■□□□□ 0.17
HIF3A-212ENST00000529205 ADCY6O43306 1168 aa16.09■□□□□ 0.17
HIF3A-212ENST00000529205 APPP05067 770 aa16.09■□□□□ 0.17
HIF3A-212ENST00000529205 BMP3P12645 472 aa16.09■□□□□ 0.17
HIF3A-212ENST00000529205 TDO2P48775 406 aa16.09■□□□□ 0.17
HIF3A-212ENST00000529205 BEX3Q00994 111 aa16.09■□□□□ 0.17
HIF3A-212ENST00000529205 IKQ13123 557 aaPredicted RBP16.09■□□□□ 0.17
HIF3A-212ENST00000529205 CXCL17Q6UXB2 119 aa16.09■□□□□ 0.17
HIF3A-212ENST00000529205 OTOP2Q7RTS6 562 aa16.09■□□□□ 0.17
HIF3A-212ENST00000529205 TLK2Q86UE8 772 aa16.09■□□□□ 0.17
HIF3A-212ENST00000529205 GMCL1P1Q8NEA9 526 aa16.09■□□□□ 0.17
HIF3A-212ENST00000529205 CHURC1Q8WUH1 139 aa16.09■□□□□ 0.17
HIF3A-212ENST00000529205 LRRCC1Q9C099 1032 aa16.09■□□□□ 0.17
HIF3A-212ENST00000529205 SLC4A7Q9Y6M7 1214 aa16.09■□□□□ 0.17
HIF3A-212ENST00000529205 VCANP13611 3396 aa16.08■□□□□ 0.17
HIF3A-212ENST00000529205 GSG1L2A8MUP6 293 aa16.08■□□□□ 0.16
HIF3A-212ENST00000529205 CHGBP05060 677 aa16.08■□□□□ 0.16
HIF3A-212ENST00000529205 SLC3A2P08195 630 aaKnown RBP16.08■□□□□ 0.16
HIF3A-212ENST00000529205 STAT2P52630 851 aa16.08■□□□□ 0.16
HIF3A-212ENST00000529205 ADGRE1Q14246 886 aa16.08■□□□□ 0.16
HIF3A-212ENST00000529205 LRRFIP1Q32MZ4 808 aaKnown RBP16.08■□□□□ 0.16
HIF3A-212ENST00000529205 TKFCQ3LXA3 575 aa16.08■□□□□ 0.16
HIF3A-212ENST00000529205 PPP2R2DQ66LE6 453 aa16.08■□□□□ 0.16
HIF3A-212ENST00000529205 SLFN13Q68D06 897 aa16.08■□□□□ 0.16
HIF3A-212ENST00000529205 FAM160B2Q86V87 743 aa16.08■□□□□ 0.16
HIF3A-212ENST00000529205 SLC43A3Q8NBI5 491 aa16.08■□□□□ 0.16
HIF3A-212ENST00000529205 MTMR4Q9NYA4 1195 aa16.08■□□□□ 0.16
HIF3A-212ENST00000529205 ZBBXA8MT70 800 aa16.07■□□□□ 0.16
HIF3A-212ENST00000529205 TMEM232C9JQI7 657 aa16.07■□□□□ 0.16
HIF3A-212ENST00000529205 DYNC1LI2O43237 492 aaPredicted RBP16.07■□□□□ 0.16
HIF3A-212ENST00000529205 TSPY3P0CV98 308 aa16.07■□□□□ 0.16
HIF3A-212ENST00000529205 TSPY8P0CW00 308 aa16.07■□□□□ 0.16
HIF3A-212ENST00000529205 CCL23P55773 120 aa16.07■□□□□ 0.16
HIF3A-212ENST00000529205 CNTN2Q02246 1040 aa16.07■□□□□ 0.16
HIF3A-212ENST00000529205 PDE4BQ07343 736 aa16.07■□□□□ 0.16
HIF3A-212ENST00000529205 FSCN1Q16658 493 aaKnown RBP16.07■□□□□ 0.16
HIF3A-212ENST00000529205 PPP4R3BQ5MIZ7 849 aa16.07■□□□□ 0.16
HIF3A-212ENST00000529205 IQSEC1Q6DN90 963 aa16.07■□□□□ 0.16
HIF3A-212ENST00000529205 SIRT2Q8IXJ6 389 aa16.07■□□□□ 0.16
HIF3A-212ENST00000529205 FAM133AQ8N9E0 248 aa16.07■□□□□ 0.16
HIF3A-212ENST00000529205 APPBP2Q92624 585 aa16.07■□□□□ 0.16
HIF3A-212ENST00000529205 CEP95Q96GE4 821 aa16.07■□□□□ 0.16
HIF3A-212ENST00000529205 GPATCH3Q96I76 525 aa16.07■□□□□ 0.16
HIF3A-212ENST00000529205 FGD4Q96M96 766 aa16.07■□□□□ 0.16
HIF3A-212ENST00000529205 NACAP1Q9BZK3 213 aa16.07■□□□□ 0.16
HIF3A-212ENST00000529205 ZBTB40Q9NUA8 1239 aa16.07■□□□□ 0.16
HIF3A-212ENST00000529205 CXXC1Q9P0U4 656 aaPredicted RBP16.07■□□□□ 0.16
HIF3A-212ENST00000529205 Q9Y3F1 56 aa16.07■□□□□ 0.16
HIF3A-212ENST00000529205 IGKV6D-41A0A0C4DH26 115 aa16.06■□□□□ 0.16
HIF3A-212ENST00000529205 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.06■□□□□ 0.16
HIF3A-212ENST00000529205 CTAGE5O15320 804 aa16.06■□□□□ 0.16
HIF3A-212ENST00000529205 ZFYP08048 801 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms