RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 KANSL2Q9H9L4 492 aa21.44■■□□□ 1.02
LTBP3-211ENST00000528966 PCDHA11Q9Y5I1 949 aa21.44■■□□□ 1.02
LTBP3-211ENST00000528966 GREB1LQ9C091 1923 aaPredicted RBP21.44■■□□□ 1.02
LTBP3-211ENST00000528966 RFXAPO00287 272 aa21.43■■□□□ 1.02
LTBP3-211ENST00000528966 RAD21O60216 631 aa21.43■■□□□ 1.02
LTBP3-211ENST00000528966 TTF1Q15361 905 aaPredicted RBP21.43■■□□□ 1.02
LTBP3-211ENST00000528966 TMEM31Q5JXX7 168 aa21.43■■□□□ 1.02
LTBP3-211ENST00000528966 C12orf60Q5U649 245 aa21.43■■□□□ 1.02
LTBP3-211ENST00000528966 AACSQ86V21 672 aa21.43■■□□□ 1.02
LTBP3-211ENST00000528966 SLF1Q9BQI6 1058 aa21.43■■□□□ 1.02
LTBP3-211ENST00000528966 NOC4LQ9BVI4 516 aaKnown RBP21.43■■□□□ 1.02
LTBP3-211ENST00000528966 C11orf16Q9NQ32 467 aa21.43■■□□□ 1.02
LTBP3-211ENST00000528966 MTCH2Q9Y6C9 303 aa21.43■■□□□ 1.02
LTBP3-211ENST00000528966 SLC4A7Q9Y6M7 1214 aa21.43■■□□□ 1.02
LTBP3-211ENST00000528966 ASTN1O14525 1302 aa21.42■■□□□ 1.02
LTBP3-211ENST00000528966 GRIN2DO15399 1336 aa21.42■■□□□ 1.02
LTBP3-211ENST00000528966 POU3F3P20264 500 aaPredicted RBP21.42■■□□□ 1.02
LTBP3-211ENST00000528966 CXCL17Q6UXB2 119 aa21.42■■□□□ 1.02
LTBP3-211ENST00000528966 C16orf86Q6ZW13 317 aa21.42■■□□□ 1.02
LTBP3-211ENST00000528966 ARMCX2Q7L311 632 aa21.42■■□□□ 1.02
LTBP3-211ENST00000528966 KHSRPQ92945 711 aaKnown RBP eCLIP21.42■■□□□ 1.02
LTBP3-211ENST00000528966 TLL1O43897 1013 aa21.41■■□□□ 1.02
LTBP3-211ENST00000528966 SLFNL1Q499Z3 407 aa21.41■■□□□ 1.02
LTBP3-211ENST00000528966 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.41■■□□□ 1.02
LTBP3-211ENST00000528966 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.41■■□□□ 1.02
LTBP3-211ENST00000528966 ATP8A2Q9NTI2 1148 aa21.41■■□□□ 1.02
LTBP3-211ENST00000528966 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.4■■□□□ 1.02
LTBP3-211ENST00000528966 ATP2A1O14983 1001 aa21.4■■□□□ 1.02
LTBP3-211ENST00000528966 SLC4A3P48751 1232 aa21.4■■□□□ 1.02
LTBP3-211ENST00000528966 KRT40Q6A162 431 aa21.4■■□□□ 1.02
LTBP3-211ENST00000528966 CCDC144CPQ8IYA2 1237 aa21.4■■□□□ 1.02
LTBP3-211ENST00000528966 CPXCR1Q8N123 301 aa21.4■■□□□ 1.02
LTBP3-211ENST00000528966 TRPV6Q9H1D0 765 aa21.4■■□□□ 1.02
LTBP3-211ENST00000528966 SCN5AQ14524 2016 aa21.39■■□□□ 1.02
LTBP3-211ENST00000528966 EPOPA6NHQ4 379 aa21.39■■□□□ 1.01
LTBP3-211ENST00000528966 USP17L12C9JPN9 530 aa21.39■■□□□ 1.01
LTBP3-211ENST00000528966 USP17L21D6R901 530 aa21.39■■□□□ 1.01
LTBP3-211ENST00000528966 GOLIM4O00461 696 aa21.39■■□□□ 1.01
LTBP3-211ENST00000528966 B4GALT4O60513 344 aa21.39■■□□□ 1.01
LTBP3-211ENST00000528966 MBD4O95243 580 aa21.39■■□□□ 1.01
LTBP3-211ENST00000528966 ATP2A2P16615 1042 aaKnown RBP21.39■■□□□ 1.01
LTBP3-211ENST00000528966 ITGA7Q13683 1181 aa21.39■■□□□ 1.01
LTBP3-211ENST00000528966 EXOC6BQ9Y2D4 811 aa21.39■■□□□ 1.01
LTBP3-211ENST00000528966 ZBBXA8MT70 800 aa21.38■■□□□ 1.01
LTBP3-211ENST00000528966 CA3P07451 260 aa21.38■■□□□ 1.01
LTBP3-211ENST00000528966 PTGS1P23219 599 aa21.38■■□□□ 1.01
LTBP3-211ENST00000528966 ANKRD35Q8N283 1001 aa21.38■■□□□ 1.01
LTBP3-211ENST00000528966 SCLYQ96I15 445 aa21.38■■□□□ 1.01
LTBP3-211ENST00000528966 CERS4Q9HA82 394 aa21.38■■□□□ 1.01
LTBP3-211ENST00000528966 COG5Q9UP83 839 aa21.38■■□□□ 1.01
LTBP3-211ENST00000528966 FAM86C2PA6NEL3 165 aa21.37■■□□□ 1.01
LTBP3-211ENST00000528966 GTPBP6O43824 516 aaPredicted RBP21.37■■□□□ 1.01
LTBP3-211ENST00000528966 GPR37L1O60883 481 aa21.37■■□□□ 1.01
LTBP3-211ENST00000528966 CABYRO75952 493 aa21.37■■□□□ 1.01
LTBP3-211ENST00000528966 TNFAIP2Q03169 654 aa21.37■■□□□ 1.01
LTBP3-211ENST00000528966 TTLL4Q14679 1199 aa21.37■■□□□ 1.01
LTBP3-211ENST00000528966 RPUSD2Q8IZ73 545 aaKnown RBP21.37■■□□□ 1.01
LTBP3-211ENST00000528966 PRPF38AQ8NAV1 312 aaKnown RBP21.37■■□□□ 1.01
LTBP3-211ENST00000528966 AGBL1Q96MI9 1066 aa21.37■■□□□ 1.01
LTBP3-211ENST00000528966 DNAJC2Q99543 621 aaKnown RBP21.37■■□□□ 1.01
LTBP3-211ENST00000528966 RAVER2Q9HCJ3 691 aaKnown RBP21.37■■□□□ 1.01
LTBP3-211ENST00000528966 IL1RAPL2Q9NP60 686 aa21.37■■□□□ 1.01
LTBP3-211ENST00000528966 GNEQ9Y223 722 aaKnown RBP21.37■■□□□ 1.01
LTBP3-211ENST00000528966 MYH4Q9Y623 1939 aa21.37■■□□□ 1.01
LTBP3-211ENST00000528966 NDUFB10O96000 172 aa21.36■■□□□ 1.01
LTBP3-211ENST00000528966 CNTN2Q02246 1040 aa21.36■■□□□ 1.01
LTBP3-211ENST00000528966 FSCN1Q16658 493 aaKnown RBP21.36■■□□□ 1.01
LTBP3-211ENST00000528966 TMEM67Q5HYA8 995 aa21.36■■□□□ 1.01
LTBP3-211ENST00000528966 F5H6K3 240 aa21.35■■□□□ 1.01
LTBP3-211ENST00000528966 ARHGEF15O94989 841 aa21.35■■□□□ 1.01
LTBP3-211ENST00000528966 ADD2P35612 726 aa21.35■■□□□ 1.01
LTBP3-211ENST00000528966 PSMC6P62333 389 aa21.35■■□□□ 1.01
LTBP3-211ENST00000528966 KLRC3Q07444 240 aa21.35■■□□□ 1.01
LTBP3-211ENST00000528966 NOL8Q76FK4 1167 aaKnown RBP21.35■■□□□ 1.01
LTBP3-211ENST00000528966 TLK2Q86UE8 772 aa21.35■■□□□ 1.01
LTBP3-211ENST00000528966 ERC1Q8IUD2 1116 aa21.35■■□□□ 1.01
LTBP3-211ENST00000528966 SLC38A10Q9HBR0 1119 aa21.35■■□□□ 1.01
LTBP3-211ENST00000528966 ZBED9Q6R2W3 1325 aa21.34■■□□□ 1.01
LTBP3-211ENST00000528966 MYH7P12883 1935 aa21.34■■□□□ 1.01
LTBP3-211ENST00000528966 ZNF316A6NFI3 1004 aaPredicted RBP21.34■■□□□ 1.01
LTBP3-211ENST00000528966 ZBED4O75132 1171 aa21.34■■□□□ 1.01
LTBP3-211ENST00000528966 CHGBP05060 677 aa21.34■■□□□ 1.01
LTBP3-211ENST00000528966 ZKSCAN2Q63HK3 967 aa21.34■■□□□ 1.01
LTBP3-211ENST00000528966 CEP85Q6P2H3 762 aa21.34■■□□□ 1.01
LTBP3-211ENST00000528966 CTR9Q6PD62 1173 aa21.34■■□□□ 1.01
LTBP3-211ENST00000528966 AMOTL1Q8IY63 956 aa21.34■■□□□ 1.01
LTBP3-211ENST00000528966 CHST13Q8NET6 341 aa21.34■■□□□ 1.01
LTBP3-211ENST00000528966 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.34■■□□□ 1.01
LTBP3-211ENST00000528966 KIFC2Q96AC6 838 aa21.34■■□□□ 1.01
LTBP3-211ENST00000528966 FBXO40Q9UH90 709 aa21.34■■□□□ 1.01
LTBP3-211ENST00000528966 COL4A4P53420 1690 aaPredicted RBP21.34■■□□□ 1.01
LTBP3-211ENST00000528966 ALYREFQ86V81 257 aaKnown RBP21.33■■□□□ 1.01
LTBP3-211ENST00000528966 FAM133AQ8N9E0 248 aa21.33■■□□□ 1.01
LTBP3-211ENST00000528966 HLA-CQ95604 372 aa21.33■■□□□ 1.01
LTBP3-211ENST00000528966 SEZ6LQ9BYH1 1024 aa21.33■■□□□ 1.01
LTBP3-211ENST00000528966 CD320Q9NPF0 282 aa21.33■■□□□ 1.01
LTBP3-211ENST00000528966 NYAP2Q9P242 653 aa21.33■■□□□ 1.01
LTBP3-211ENST00000528966 DDX49Q9Y6V7 483 aaKnown RBP21.33■■□□□ 1.01
LTBP3-211ENST00000528966 TET1Q8NFU7 2136 aa21.32■■□□□ 1
LTBP3-211ENST00000528966 PFKMP08237 780 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms