RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 OR8K1Q8NGG5 319 aa9.35□□□□□ -0.91
CTNND1-219ENST00000528621 ZBTB9Q96C00 473 aa9.35□□□□□ -0.91
CTNND1-219ENST00000528621 YEATS2Q9ULM3 1422 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 TBC1D8O95759 1140 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 U2AF2P26368 475 aaKnown RBP eCLIP9.34□□□□□ -0.911e-10■■□□□ 14
CTNND1-219ENST00000528621 BAG6P46379 1132 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 RSAD2Q8WXG1 361 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 COL4A3BPQ9Y5P4 624 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 BZW2Q9Y6E2 419 aaKnown RBP9.34□□□□□ -0.91
CTNND1-219ENST00000528621 PALM3A6NDB9 673 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-219ENST00000528621 RPN1P04843 607 aaKnown RBP9.34□□□□□ -0.91
CTNND1-219ENST00000528621 GAP43P17677 238 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 NEDD9Q14511 834 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 EAPPQ56P03 285 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-219ENST00000528621 GADL1Q6ZQY3 521 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 TRMT2AQ8IZ69 625 aaKnown RBP9.34□□□□□ -0.91
CTNND1-219ENST00000528621 SDR42E1Q8WUS8 393 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 CNKSR1Q969H4 720 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 FAM207AQ9NSI2 230 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-219ENST00000528621 TYW1Q9NV66 732 aaKnown RBP9.34□□□□□ -0.91
CTNND1-219ENST00000528621 GINS2Q9Y248 185 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 SAR1BQ9Y6B6 198 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 TNKSO95271 1327 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 MBD5Q9P267 1494 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 SPOUT1Q5T280 376 aaKnown RBP9.34□□□□□ -0.91
CTNND1-219ENST00000528621 CMTR1Q8N1G2 835 aaKnown RBP9.34□□□□□ -0.91
CTNND1-219ENST00000528621 LRRC47Q8N1G4 583 aaKnown RBP9.34□□□□□ -0.91
CTNND1-219ENST00000528621 METTL13Q8N6R0 699 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 MRFAP1L1Q96HT8 127 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 CCDC17Q96LX7 622 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 XPO4Q9C0E2 1151 aaKnown RBP9.34□□□□□ -0.91
CTNND1-219ENST00000528621 LSG1Q9H089 658 aaKnown RBP9.34□□□□□ -0.91
CTNND1-219ENST00000528621 TPCN1Q9ULQ1 816 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 USP6P35125 1406 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 PSDA5PKW4 1024 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-219ENST00000528621 M0R2C6 588 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 DMP1Q13316 513 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-219ENST00000528621 ZMYM1Q5SVZ6 1142 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 SPATA1Q5VX52 437 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 TTLL7Q6ZT98 887 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 SND1Q7KZF4 910 aaKnown RBP eCLIP9.34□□□□□ -0.91
CTNND1-219ENST00000528621 FNBP4Q8N3X1 1017 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-219ENST00000528621 GLG1Q92896 1179 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 ATP2A3Q93084 1043 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 VPS37BQ9H9H4 285 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 NRBP2Q9NSY0 501 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 RTEL1Q9NZ71 1219 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 IGSF1Q8N6C5 1336 aa9.34□□□□□ -0.91
CTNND1-219ENST00000528621 GIPC1O14908 333 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 MAN1A1P33908 653 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 IL6STP40189 918 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-219ENST00000528621 ZNF131P52739 623 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 APBA1Q02410 837 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 LRRC24Q50LG9 513 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 LMNTD2Q8IXW0 634 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 SMCR8Q8TEV9 937 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-219ENST00000528621 PCDHA4Q9UN74 947 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 IQGAP3Q86VI3 1631 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 PNMA1Q8ND90 353 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 GPKOWQ92917 476 aaPredicted RBP eCLIP9.33□□□□□ -0.92
CTNND1-219ENST00000528621 VCXQ9H320 206 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 SPC25Q9HBM1 224 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 USH1CQ9Y6N9 552 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 ALAS1P13196 640 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 YARSP54577 528 aaKnown RBP9.33□□□□□ -0.92
CTNND1-219ENST00000528621 USP14P54578 494 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 ADKP55263 362 aaKnown RBP9.33□□□□□ -0.92
CTNND1-219ENST00000528621 TFDP1Q14186 410 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 AOC3Q16853 763 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 XKR9Q5GH70 373 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 CASC4Q6P4E1 433 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.33□□□□□ -0.926e-14■□□□□ 9.9
CTNND1-219ENST00000528621 TRIM11Q96F44 468 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 PAGR1Q9BTK6 254 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 PCDHA12Q9UN75 941 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 WDR17Q8IZU2 1322 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 ZNF804BA4D1E1 1349 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 ICA1Q05084 483 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.33□□□□□ -0.92
CTNND1-219ENST00000528621 STAMQ92783 540 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 ABCC12Q96J65 1359 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 RASSF4Q9H2L5 321 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 NR1I2O75469 434 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 ERCC3P19447 782 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 KIF22Q14807 665 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 DOK7Q18PE1 504 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 C1orf112Q9NSG2 853 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 MTMR6Q9Y217 621 aa9.33□□□□□ -0.92
CTNND1-219ENST00000528621 CPSF1Q10570 1443 aaKnown RBP9.32□□□□□ -0.92
CTNND1-219ENST00000528621 NDUFAB1O14561 156 aa9.32□□□□□ -0.92
CTNND1-219ENST00000528621 CRKLP46109 303 aaKnown RBP9.32□□□□□ -0.92
CTNND1-219ENST00000528621 RASSF2P50749 326 aa9.32□□□□□ -0.92
CTNND1-219ENST00000528621 SCNN1DP51172 638 aa9.32□□□□□ -0.92
CTNND1-219ENST00000528621 SEPT2Q15019 361 aa9.32□□□□□ -0.92
CTNND1-219ENST00000528621 GPATCH4Q5T3I0 446 aaKnown RBP9.32□□□□□ -0.92
CTNND1-219ENST00000528621 TSC1Q92574 1164 aa9.32□□□□□ -0.92
CTNND1-219ENST00000528621 MAP4K1Q92918 833 aa9.32□□□□□ -0.92
CTNND1-219ENST00000528621 DCPSQ96C86 337 aaKnown RBP9.32□□□□□ -0.92
CTNND1-219ENST00000528621 EDC3Q96F86 508 aaKnown RBP9.32□□□□□ -0.92
CTNND1-219ENST00000528621 VCX3BQ9H321 246 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms