RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 CCDC136Q96JN2 1154 aa10.67□□□□□ -0.7
CMTM1-210ENST00000528441 DSCC1Q9BVC3 393 aa10.67□□□□□ -0.7
CMTM1-210ENST00000528441 KRT23Q9C075 422 aa10.67□□□□□ -0.7
CMTM1-210ENST00000528441 FLRT1Q9NZU1 646 aa10.67□□□□□ -0.7
CMTM1-210ENST00000528441 FBXO40Q9UH90 709 aa10.67□□□□□ -0.7
CMTM1-210ENST00000528441 DDX20Q9UHI6 824 aaKnown RBP10.67□□□□□ -0.7
CMTM1-210ENST00000528441 CCPG1Q9ULG6 757 aa10.67□□□□□ -0.7
CMTM1-210ENST00000528441 RLFQ13129 1914 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 ZNFX1Q9P2E3 1918 aaKnown RBP10.66□□□□□ -0.7
CMTM1-210ENST00000528441 NEDD4P46934 1319 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 ERICH2A1L162 156 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 KBTBD13C9JR72 458 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 FOXP2O15409 715 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 COBLO75128 1261 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 ATN1P54259 1190 aaPredicted RBP10.66□□□□□ -0.7
CMTM1-210ENST00000528441 OLFML2BQ68BL8 750 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 RCSD1Q6JBY9 416 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 CASC1Q6TDU7 716 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 NSMFQ6X4W1 530 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 NOL8Q76FK4 1167 aaKnown RBP10.66□□□□□ -0.7
CMTM1-210ENST00000528441 ABRAQ8N0Z2 381 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 USP6NLQ92738 828 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 GMCL1Q96IK5 515 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 MAML3Q96JK9 1138 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 TMEM47Q9BQJ4 181 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 ACAD9Q9H845 621 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 CNNM2Q9H8M5 875 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 RNF146Q9NTX7 359 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 ZNF214Q9UL59 606 aaPredicted RBP10.66□□□□□ -0.7
CMTM1-210ENST00000528441 PCDHB8Q9UN66 801 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 PLXNA1Q9UIW2 1896 aa10.66□□□□□ -0.7
CMTM1-210ENST00000528441 LAMA4Q16363 1823 aa10.65□□□□□ -0.7
CMTM1-210ENST00000528441 ZNF236Q9UL36 1845 aa10.65□□□□□ -0.7
CMTM1-210ENST00000528441 POTEB2H3BUK9 544 aa10.65□□□□□ -0.7
CMTM1-210ENST00000528441 HOXC6P09630 235 aa10.65□□□□□ -0.7
CMTM1-210ENST00000528441 RARBP10826 455 aa10.65□□□□□ -0.7
CMTM1-210ENST00000528441 SLC16A2P36021 539 aa10.65□□□□□ -0.7
CMTM1-210ENST00000528441 PRAMEF19Q5SWL8 479 aa10.65□□□□□ -0.7
CMTM1-210ENST00000528441 MAP3K21Q5TCX8 1036 aa10.65□□□□□ -0.7
CMTM1-210ENST00000528441 SYDE2Q5VT97 1194 aa10.65□□□□□ -0.7
CMTM1-210ENST00000528441 CENPQQ7L2Z9 268 aaPredicted RBP10.65□□□□□ -0.7
CMTM1-210ENST00000528441 RASGRP2Q7LDG7 609 aa10.65□□□□□ -0.7
CMTM1-210ENST00000528441 ZNF467Q7Z7K2 595 aaPredicted RBP10.65□□□□□ -0.7
CMTM1-210ENST00000528441 CHST13Q8NET6 341 aa10.65□□□□□ -0.7
CMTM1-210ENST00000528441 TRERF1Q96PN7 1200 aa10.65□□□□□ -0.7
CMTM1-210ENST00000528441 SENP6Q9GZR1 1112 aaPredicted RBP10.65□□□□□ -0.7
CMTM1-210ENST00000528441 SLC38A10Q9HBR0 1119 aa10.65□□□□□ -0.7
CMTM1-210ENST00000528441 IL17RBQ9NRM6 502 aa10.65□□□□□ -0.7
CMTM1-210ENST00000528441 PRR12Q9ULL5 1215 aa10.65□□□□□ -0.7
CMTM1-210ENST00000528441 CENPFP49454 3210 aa10.65□□□□□ -0.71
CMTM1-210ENST00000528441 TTLL13PA6NNM8 815 aa10.64□□□□□ -0.71
CMTM1-210ENST00000528441 H0YGN5 161 aa10.64□□□□□ -0.71
CMTM1-210ENST00000528441 OAZ1P54368 228 aa10.64□□□□□ -0.71
CMTM1-210ENST00000528441 SART3Q15020 963 aaKnown RBP10.64□□□□□ -0.71
CMTM1-210ENST00000528441 GJC2Q5T442 439 aaPredicted RBP10.64□□□□□ -0.71
CMTM1-210ENST00000528441 IFIT1BQ5T764 474 aaKnown RBP10.64□□□□□ -0.71
CMTM1-210ENST00000528441 TTBK2Q6IQ55 1244 aa10.64□□□□□ -0.71
CMTM1-210ENST00000528441 ARRDC4Q8NCT1 418 aa10.64□□□□□ -0.71
CMTM1-210ENST00000528441 REPS2Q8NFH8 660 aa10.64□□□□□ -0.71
CMTM1-210ENST00000528441 AGBL1Q96MI9 1066 aa10.64□□□□□ -0.71
CMTM1-210ENST00000528441 TINF2Q9BSI4 451 aa10.64□□□□□ -0.71
CMTM1-210ENST00000528441 CRISPLD2Q9H0B8 497 aa10.64□□□□□ -0.71
CMTM1-210ENST00000528441 PRKAG2Q9UGJ0 569 aa10.64□□□□□ -0.71
CMTM1-210ENST00000528441 OGDHLQ9ULD0 1010 aa10.64□□□□□ -0.71
CMTM1-210ENST00000528441 ZMYND8Q9ULU4 1186 aaPredicted RBP10.64□□□□□ -0.71
CMTM1-210ENST00000528441 ADAMTS5Q9UNA0 930 aa10.64□□□□□ -0.71
CMTM1-210ENST00000528441 RIPK3Q9Y572 518 aa10.64□□□□□ -0.71
CMTM1-210ENST00000528441 HTTP42858 3142 aa10.64□□□□□ -0.71
CMTM1-210ENST00000528441 FRMPD3Q5JV73 1810 aa10.63□□□□□ -0.71
CMTM1-210ENST00000528441 TNKSO95271 1327 aa10.63□□□□□ -0.71
CMTM1-210ENST00000528441 PTPDC1A2A3K4 754 aa10.63□□□□□ -0.71
CMTM1-210ENST00000528441 SEPT4O43236 478 aa10.63□□□□□ -0.71
CMTM1-210ENST00000528441 GOLGA8HP0CJ92 632 aa10.63□□□□□ -0.71
CMTM1-210ENST00000528441 CYBAP13498 195 aa10.63□□□□□ -0.71
CMTM1-210ENST00000528441 AKR1A1P14550 325 aa10.63□□□□□ -0.71
CMTM1-210ENST00000528441 CHMLP26374 656 aa10.63□□□□□ -0.71
CMTM1-210ENST00000528441 TKFCQ3LXA3 575 aa10.63□□□□□ -0.71
CMTM1-210ENST00000528441 USH1GQ495M9 461 aa10.63□□□□□ -0.71
CMTM1-210ENST00000528441 PNMA1Q8ND90 353 aa10.63□□□□□ -0.71
CMTM1-210ENST00000528441 TTC14Q96N46 770 aa10.63□□□□□ -0.71
CMTM1-210ENST00000528441 ZSCAN10Q96SZ4 725 aaPredicted RBP10.63□□□□□ -0.71
CMTM1-210ENST00000528441 MPHOSPH6Q99547 160 aaKnown RBP10.63□□□□□ -0.71
CMTM1-210ENST00000528441 SPC25Q9HBM1 224 aa10.63□□□□□ -0.71
CMTM1-210ENST00000528441 ANO2Q9NQ90 1003 aa10.63□□□□□ -0.71
CMTM1-210ENST00000528441 XPNPEP3Q9NQH7 507 aa10.63□□□□□ -0.71
CMTM1-210ENST00000528441 TCP11L1Q9NUJ3 509 aa10.63□□□□□ -0.71
CMTM1-210ENST00000528441 TACC3Q9Y6A5 838 aa10.63□□□□□ -0.71
CMTM1-210ENST00000528441 PFASO15067 1338 aa10.62□□□□□ -0.71
CMTM1-210ENST00000528441 IFIT3O14879 490 aaKnown RBP10.62□□□□□ -0.71
CMTM1-210ENST00000528441 PARP1P09874 1014 aaKnown RBP10.62□□□□□ -0.71
CMTM1-210ENST00000528441 PDHBP11177 359 aa10.62□□□□□ -0.71
CMTM1-210ENST00000528441 SYN1P17600 705 aa10.62□□□□□ -0.71
CMTM1-210ENST00000528441 CALML3P27482 149 aa10.62□□□□□ -0.71
CMTM1-210ENST00000528441 NT5C2P49902 561 aa10.62□□□□□ -0.71
CMTM1-210ENST00000528441 ZNF792Q3KQV3 632 aa10.62□□□□□ -0.71
CMTM1-210ENST00000528441 GPATCH4Q5T3I0 446 aaKnown RBP10.62□□□□□ -0.71
CMTM1-210ENST00000528441 RNF180Q86T96 592 aa10.62□□□□□ -0.71
CMTM1-210ENST00000528441 DGKHQ86XP1 1220 aa10.62□□□□□ -0.71
CMTM1-210ENST00000528441 NCOA7Q8NI08 942 aa10.62□□□□□ -0.71
CMTM1-210ENST00000528441 VTI1AQ96AJ9 217 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms