RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 PLA2G6O60733 806 aa30.64■■■□□ 2.5
TRIM3-206ENST00000528227 SLC17A8Q8NDX2 589 aa30.64■■■□□ 2.5
TRIM3-206ENST00000528227 KLHDC9Q8NEP7 349 aa30.64■■■□□ 2.5
TRIM3-206ENST00000528227 CHMP4CQ96CF2 233 aa30.64■■■□□ 2.5
TRIM3-206ENST00000528227 DUSP11O75319 330 aaKnown RBP30.63■■■□□ 2.49
TRIM3-206ENST00000528227 ACLYP53396 1101 aa30.63■■■□□ 2.49
TRIM3-206ENST00000528227 IKQ13123 557 aaPredicted RBP30.63■■■□□ 2.49
TRIM3-206ENST00000528227 ALX1Q15699 326 aa30.63■■■□□ 2.49
TRIM3-206ENST00000528227 AGBL1Q96MI9 1066 aa30.63■■■□□ 2.49
TRIM3-206ENST00000528227 ABHD16BQ9H3Z7 469 aa30.63■■■□□ 2.49
TRIM3-206ENST00000528227 ACAD9Q9H845 621 aa30.63■■■□□ 2.49
TRIM3-206ENST00000528227 STXBP5LQ9Y2K9 1186 aa30.63■■■□□ 2.49
TRIM3-206ENST00000528227 MCM3APO60318 1980 aa30.63■■■□□ 2.49
TRIM3-206ENST00000528227 POTEB2H3BUK9 544 aa30.62■■■□□ 2.49
TRIM3-206ENST00000528227 CLTBP09497 229 aa30.62■■■□□ 2.49
TRIM3-206ENST00000528227 FGRP09769 529 aa30.62■■■□□ 2.49
TRIM3-206ENST00000528227 SHHQ15465 462 aa30.62■■■□□ 2.49
TRIM3-206ENST00000528227 CCSAPQ6IQ19 270 aaPredicted RBP30.62■■■□□ 2.49
TRIM3-206ENST00000528227 RCSD1Q6JBY9 416 aa30.62■■■□□ 2.49
TRIM3-206ENST00000528227 KCTD1Q719H9 257 aa30.62■■■□□ 2.49
TRIM3-206ENST00000528227 ARMCX2Q7L311 632 aa30.62■■■□□ 2.49
TRIM3-206ENST00000528227 MOXD2PA6NHM9 499 aa30.61■■■□□ 2.49
TRIM3-206ENST00000528227 ADCY6O43306 1168 aa30.61■■■□□ 2.49
TRIM3-206ENST00000528227 ORC4O43929 436 aa30.61■■■□□ 2.49
TRIM3-206ENST00000528227 RANBP6O60518 1105 aaKnown RBP30.61■■■□□ 2.49
TRIM3-206ENST00000528227 NOVP48745 357 aa30.61■■■□□ 2.49
TRIM3-206ENST00000528227 C9orf50Q5SZB4 431 aa30.61■■■□□ 2.49
TRIM3-206ENST00000528227 FAM109BQ6ICB4 259 aaPredicted RBP30.61■■■□□ 2.49
TRIM3-206ENST00000528227 CCDC144CPQ8IYA2 1237 aa30.61■■■□□ 2.49
TRIM3-206ENST00000528227 FAM227BQ96M60 508 aa30.61■■■□□ 2.49
TRIM3-206ENST00000528227 STARD7Q9NQZ5 370 aa30.61■■■□□ 2.49
TRIM3-206ENST00000528227 RNF146Q9NTX7 359 aa30.61■■■□□ 2.49
TRIM3-206ENST00000528227 A0A0D9SFI3 127 aa30.6■■■□□ 2.49
TRIM3-206ENST00000528227 MYADML2A6NDP7 307 aa30.6■■■□□ 2.49
TRIM3-206ENST00000528227 PQBP1O60828 265 aaKnown RBP30.6■■■□□ 2.49
TRIM3-206ENST00000528227 ITGB8P26012 769 aa30.6■■■□□ 2.49
TRIM3-206ENST00000528227 CST5P28325 142 aaPredicted RBP30.6■■■□□ 2.49
TRIM3-206ENST00000528227 CNTN2Q02246 1040 aa30.6■■■□□ 2.49
TRIM3-206ENST00000528227 KCNA10Q16322 511 aa30.6■■■□□ 2.49
TRIM3-206ENST00000528227 TKFCQ3LXA3 575 aa30.6■■■□□ 2.49
TRIM3-206ENST00000528227 CCDC144BQ3MJ40 725 aa30.6■■■□□ 2.49
TRIM3-206ENST00000528227 RASGRP2Q7LDG7 609 aa30.6■■■□□ 2.49
TRIM3-206ENST00000528227 TICAM2Q86XR7 235 aa30.6■■■□□ 2.49
TRIM3-206ENST00000528227 FAM133AQ8N9E0 248 aa30.6■■■□□ 2.49
TRIM3-206ENST00000528227 NUP133Q8WUM0 1156 aa30.6■■■□□ 2.49
TRIM3-206ENST00000528227 A1CFQ9NQ94 594 aaKnown RBP30.6■■■□□ 2.49
TRIM3-206ENST00000528227 KIAA0355O15063 1070 aa30.59■■■□□ 2.49
TRIM3-206ENST00000528227 MCMDC2Q4G0Z9 681 aa30.59■■■□□ 2.49
TRIM3-206ENST00000528227 ANKRD33Q7Z3H0 272 aa30.59■■■□□ 2.49
TRIM3-206ENST00000528227 KATNBL1Q9H079 304 aa30.59■■■□□ 2.49
TRIM3-206ENST00000528227 PRR12Q9ULL5 1215 aa30.59■■■□□ 2.49
TRIM3-206ENST00000528227 FGAP02671 866 aa30.58■■■□□ 2.49
TRIM3-206ENST00000528227 IRX5P78411 483 aaPredicted RBP30.58■■■□□ 2.49
TRIM3-206ENST00000528227 TOX2Q96NM4 488 aa30.58■■■□□ 2.49
TRIM3-206ENST00000528227 TRERF1Q96PN7 1200 aa30.58■■■□□ 2.49
TRIM3-206ENST00000528227 UPF3AQ9H1J1 476 aaKnown RBP30.58■■■□□ 2.49
TRIM3-206ENST00000528227 C6orf222P0C671 652 aaPredicted RBP30.57■■■□□ 2.48
TRIM3-206ENST00000528227 ALAS1P13196 640 aa30.57■■■□□ 2.48
TRIM3-206ENST00000528227 SNAP25P60880 206 aa30.57■■■□□ 2.48
TRIM3-206ENST00000528227 CCDC174Q6PII3 467 aa30.57■■■□□ 2.48
TRIM3-206ENST00000528227 ZMYM6O95789 1325 aa30.56■■■□□ 2.48
TRIM3-206ENST00000528227 SOWAHBA6NEL2 793 aa30.56■■■□□ 2.48
TRIM3-206ENST00000528227 GJA9P57773 515 aa30.56■■■□□ 2.48
TRIM3-206ENST00000528227 FAAP100Q0VG06 881 aa30.56■■■□□ 2.48
TRIM3-206ENST00000528227 PCSK9Q8NBP7 692 aaKnown RBP30.56■■■□□ 2.48
TRIM3-206ENST00000528227 DCAF4Q8WV16 495 aa30.56■■■□□ 2.48
TRIM3-206ENST00000528227 LNPKQ9C0E8 428 aa30.56■■■□□ 2.48
TRIM3-206ENST00000528227 SPC25Q9HBM1 224 aa30.56■■■□□ 2.48
TRIM3-206ENST00000528227 MTMR7Q9Y216 660 aa30.56■■■□□ 2.48
TRIM3-206ENST00000528227 HSPD1P10809 573 aaKnown RBP30.55■■■□□ 2.48
TRIM3-206ENST00000528227 RAG1P15918 1043 aa30.55■■■□□ 2.48
TRIM3-206ENST00000528227 NMIQ13287 307 aaPredicted RBP30.55■■■□□ 2.48
TRIM3-206ENST00000528227 AAMPQ13685 434 aa30.55■■■□□ 2.48
TRIM3-206ENST00000528227 ZNF589Q86UQ0 364 aaPredicted RBP30.55■■■□□ 2.48
TRIM3-206ENST00000528227 TOMM22Q9NS69 142 aa30.55■■■□□ 2.48
TRIM3-206ENST00000528227 TMEM39AQ9NV64 488 aa30.55■■■□□ 2.48
TRIM3-206ENST00000528227 ELP1O95163 1332 aa30.54■■■□□ 2.48
TRIM3-206ENST00000528227 LRRC37A2A6NM11 1700 aa30.54■■■□□ 2.48
TRIM3-206ENST00000528227 DCDC2CA8MYV0 355 aa30.54■■■□□ 2.48
TRIM3-206ENST00000528227 ASGR1P07306 291 aa30.54■■■□□ 2.48
TRIM3-206ENST00000528227 CCDC96Q2M329 555 aa30.54■■■□□ 2.48
TRIM3-206ENST00000528227 RRP12Q5JTH9 1297 aaKnown RBP30.54■■■□□ 2.48
TRIM3-206ENST00000528227 GLT1D1Q96MS3 346 aa30.54■■■□□ 2.48
TRIM3-206ENST00000528227 GUCD1Q96NT3 240 aa30.54■■■□□ 2.48
TRIM3-206ENST00000528227 ASB14A6NK59 587 aa30.53■■■□□ 2.48
TRIM3-206ENST00000528227 MUM1L1Q5H9M0 696 aa30.53■■■□□ 2.48
TRIM3-206ENST00000528227 SMC5Q8IY18 1101 aa30.53■■■□□ 2.48
TRIM3-206ENST00000528227 TCP11L1Q9NUJ3 509 aa30.53■■■□□ 2.48
TRIM3-206ENST00000528227 LAMA2P24043 3122 aaKnown RBP30.53■■■□□ 2.48
TRIM3-206ENST00000528227 ASTN1O14525 1302 aa30.52■■■□□ 2.48
TRIM3-206ENST00000528227 CCDC171Q6TFL3 1326 aa30.52■■■□□ 2.48
TRIM3-206ENST00000528227 TRIM6-TRIM34B2RNG4 842 aa30.52■■■□□ 2.48
TRIM3-206ENST00000528227 CTAGE5O15320 804 aa30.52■■■□□ 2.48
TRIM3-206ENST00000528227 EPHB4P54760 987 aa30.52■■■□□ 2.48
TRIM3-206ENST00000528227 NKX3-2P78367 333 aa30.52■■■□□ 2.48
TRIM3-206ENST00000528227 GNASQ5JWF2 1037 aa30.52■■■□□ 2.48
TRIM3-206ENST00000528227 ZNF697Q5TEC3 545 aa30.52■■■□□ 2.48
TRIM3-206ENST00000528227 FAM161BQ96MY7 647 aa30.52■■■□□ 2.48
TRIM3-206ENST00000528227 TMEM47Q9BQJ4 181 aa30.52■■■□□ 2.48
TRIM3-206ENST00000528227 RANBP17Q9H2T7 1088 aaKnown RBP30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms