RNA–Protein interactions for RNA: ENST00000527952.1

PTPRJ-205, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 5

Gene PTPRJ, Length 626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-205ENST00000527952 NMT2O60551 498 aa28.55■■■□□ 2.16
PTPRJ-205ENST00000527952 SLC3A2P08195 630 aaKnown RBP28.55■■■□□ 2.16
PTPRJ-205ENST00000527952 C6orf222P0C671 652 aaPredicted RBP28.55■■■□□ 2.16
PTPRJ-205ENST00000527952 MX1P20591 662 aa28.55■■■□□ 2.16
PTPRJ-205ENST00000527952 FAAP100Q0VG06 881 aa28.55■■■□□ 2.16
PTPRJ-205ENST00000527952 CCDC144BQ3MJ40 725 aa28.55■■■□□ 2.16
PTPRJ-205ENST00000527952 CCSAPQ6IQ19 270 aaPredicted RBP28.55■■■□□ 2.16
PTPRJ-205ENST00000527952 ARMCX2Q7L311 632 aa28.55■■■□□ 2.16
PTPRJ-205ENST00000527952 CHST13Q8NET6 341 aa28.55■■■□□ 2.16
PTPRJ-205ENST00000527952 SEMA6BQ9H3T3 888 aa28.55■■■□□ 2.16
PTPRJ-205ENST00000527952 FOXP2O15409 715 aa28.54■■■□□ 2.16
PTPRJ-205ENST00000527952 DUSP11O75319 330 aaKnown RBP28.54■■■□□ 2.16
PTPRJ-205ENST00000527952 ZNF467Q7Z7K2 595 aaPredicted RBP28.54■■■□□ 2.16
PTPRJ-205ENST00000527952 CDX2Q99626 313 aaPredicted RBP28.54■■■□□ 2.16
PTPRJ-205ENST00000527952 FBXO40Q9UH90 709 aa28.54■■■□□ 2.16
PTPRJ-205ENST00000527952 DDX49Q9Y6V7 483 aaKnown RBP28.54■■■□□ 2.16
PTPRJ-205ENST00000527952 CCDC174Q6PII3 467 aa28.53■■■□□ 2.16
PTPRJ-205ENST00000527952 KCTD1Q719H9 257 aa28.53■■■□□ 2.16
PTPRJ-205ENST00000527952 CCDC144CPQ8IYA2 1237 aa28.53■■■□□ 2.16
PTPRJ-205ENST00000527952 NUP133Q8WUM0 1156 aa28.53■■■□□ 2.16
PTPRJ-205ENST00000527952 VTI1AQ96AJ9 217 aa28.53■■■□□ 2.16
PTPRJ-205ENST00000527952 RNPC3Q96LT9 517 aaKnown RBP28.53■■■□□ 2.16
PTPRJ-205ENST00000527952 MOXD2PA6NHM9 499 aa28.52■■■□□ 2.16
PTPRJ-205ENST00000527952 DCDC2CA8MYV0 355 aa28.52■■■□□ 2.16
PTPRJ-205ENST00000527952 SLC1A4P43007 532 aa28.52■■■□□ 2.16
PTPRJ-205ENST00000527952 STAT2P52630 851 aa28.52■■■□□ 2.16
PTPRJ-205ENST00000527952 OAZ1P54368 228 aa28.52■■■□□ 2.16
PTPRJ-205ENST00000527952 VPS53Q5VIR6 699 aa28.52■■■□□ 2.16
PTPRJ-205ENST00000527952 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.52■■■□□ 2.16
PTPRJ-205ENST00000527952 STAG1Q8WVM7 1258 aa28.52■■■□□ 2.16
PTPRJ-205ENST00000527952 TTYH1Q9H313 450 aaPredicted RBP28.52■■■□□ 2.16
PTPRJ-205ENST00000527952 ABHD16BQ9H3Z7 469 aa28.52■■■□□ 2.16
PTPRJ-205ENST00000527952 ACAD9Q9H845 621 aa28.52■■■□□ 2.16
PTPRJ-205ENST00000527952 RNF146Q9NTX7 359 aa28.52■■■□□ 2.16
PTPRJ-205ENST00000527952 SYNPO2Q9UMS6 1093 aa28.52■■■□□ 2.16
PTPRJ-205ENST00000527952 STX8Q9UNK0 236 aa28.52■■■□□ 2.16
PTPRJ-205ENST00000527952 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.52■■■□□ 2.16
PTPRJ-205ENST00000527952 CUL9Q8IWT3 2517 aa28.52■■■□□ 2.16
PTPRJ-205ENST00000527952 ZNF536O15090 1300 aa28.51■■■□□ 2.15
PTPRJ-205ENST00000527952 TSPY2A6NKD2 308 aa28.51■■■□□ 2.15
PTPRJ-205ENST00000527952 ASGR1P07306 291 aa28.51■■■□□ 2.15
PTPRJ-205ENST00000527952 FPGSQ05932 587 aa28.51■■■□□ 2.15
PTPRJ-205ENST00000527952 ANKRD33Q7Z3H0 272 aa28.51■■■□□ 2.15
PTPRJ-205ENST00000527952 IL17RBQ9NRM6 502 aa28.51■■■□□ 2.15
PTPRJ-205ENST00000527952 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.5■■■□□ 2.15
PTPRJ-205ENST00000527952 ALAS1P13196 640 aa28.5■■■□□ 2.15
PTPRJ-205ENST00000527952 PTGS1P23219 599 aa28.5■■■□□ 2.15
PTPRJ-205ENST00000527952 SMAD3P84022 425 aaKnown RBP28.5■■■□□ 2.15
PTPRJ-205ENST00000527952 ANKRD45Q5TZF3 282 aa28.5■■■□□ 2.15
PTPRJ-205ENST00000527952 CHURC1Q8WUH1 139 aa28.5■■■□□ 2.15
PTPRJ-205ENST00000527952 MYLIPQ8WY64 445 aa28.5■■■□□ 2.15
PTPRJ-205ENST00000527952 GLT1D1Q96MS3 346 aa28.5■■■□□ 2.15
PTPRJ-205ENST00000527952 TOX2Q96NM4 488 aa28.5■■■□□ 2.15
PTPRJ-205ENST00000527952 KATNBL1Q9H079 304 aa28.5■■■□□ 2.15
PTPRJ-205ENST00000527952 A1CFQ9NQ94 594 aaKnown RBP28.5■■■□□ 2.15
PTPRJ-205ENST00000527952 SALL3Q9BXA9 1300 aa28.49■■■□□ 2.15
PTPRJ-205ENST00000527952 SOWAHBA6NEL2 793 aa28.49■■■□□ 2.15
PTPRJ-205ENST00000527952 BEX3Q00994 111 aa28.49■■■□□ 2.15
PTPRJ-205ENST00000527952 GNASQ5JWF2 1037 aa28.49■■■□□ 2.15
PTPRJ-205ENST00000527952 FAM160B2Q86V87 743 aa28.49■■■□□ 2.15
PTPRJ-205ENST00000527952 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.49■■■□□ 2.15
PTPRJ-205ENST00000527952 FAM133AQ8N9E0 248 aa28.49■■■□□ 2.15
PTPRJ-205ENST00000527952 GMCL1Q96IK5 515 aa28.49■■■□□ 2.15
PTPRJ-205ENST00000527952 TRERF1Q96PN7 1200 aa28.49■■■□□ 2.15
PTPRJ-205ENST00000527952 UNC80Q8N2C7 3258 aa28.48■■■□□ 2.15
PTPRJ-205ENST00000527952 RANBP6O60518 1105 aaKnown RBP28.48■■■□□ 2.15
PTPRJ-205ENST00000527952 CST5P28325 142 aaPredicted RBP28.48■■■□□ 2.15
PTPRJ-205ENST00000527952 GJA9P57773 515 aa28.48■■■□□ 2.15
PTPRJ-205ENST00000527952 NOL8Q76FK4 1167 aaKnown RBP28.48■■■□□ 2.15
PTPRJ-205ENST00000527952 UPF3AQ9H1J1 476 aaKnown RBP28.48■■■□□ 2.15
PTPRJ-205ENST00000527952 SPC25Q9HBM1 224 aa28.48■■■□□ 2.15
PTPRJ-205ENST00000527952 MUM1L1Q5H9M0 696 aa28.47■■■□□ 2.15
PTPRJ-205ENST00000527952 PCSK9Q8NBP7 692 aaKnown RBP28.47■■■□□ 2.15
PTPRJ-205ENST00000527952 CRBNQ96SW2 442 aa28.47■■■□□ 2.15
PTPRJ-205ENST00000527952 CTAGE5O15320 804 aa28.46■■■□□ 2.15
PTPRJ-205ENST00000527952 TIMP1P01033 207 aa28.46■■■□□ 2.15
PTPRJ-205ENST00000527952 FDX1P10109 184 aa28.46■■■□□ 2.15
PTPRJ-205ENST00000527952 CDK7P50613 346 aa28.46■■■□□ 2.15
PTPRJ-205ENST00000527952 RCSD1Q6JBY9 416 aa28.46■■■□□ 2.15
PTPRJ-205ENST00000527952 PURBQ96QR8 312 aaKnown RBP28.46■■■□□ 2.15
PTPRJ-205ENST00000527952 ZBTB47Q9UFB7 747 aaPredicted RBP28.46■■■□□ 2.15
PTPRJ-205ENST00000527952 TBX21Q9UL17 535 aa28.46■■■□□ 2.15
PTPRJ-205ENST00000527952 PRR12Q9ULL5 1215 aa28.46■■■□□ 2.15
PTPRJ-205ENST00000527952 ASTN1O14525 1302 aa28.45■■■□□ 2.15
PTPRJ-205ENST00000527952 ELP1O95163 1332 aa28.45■■■□□ 2.15
PTPRJ-205ENST00000527952 RRP1P56182 461 aaKnown RBP28.45■■■□□ 2.14
PTPRJ-205ENST00000527952 EEPD1Q7L9B9 569 aa28.45■■■□□ 2.14
PTPRJ-205ENST00000527952 COL25A1Q9BXS0 654 aaPredicted RBP28.45■■■□□ 2.14
PTPRJ-205ENST00000527952 TOMM22Q9NS69 142 aa28.45■■■□□ 2.14
PTPRJ-205ENST00000527952 TNFAIP2Q03169 654 aa28.44■■■□□ 2.14
PTPRJ-205ENST00000527952 CCDC96Q2M329 555 aa28.44■■■□□ 2.14
PTPRJ-205ENST00000527952 TMEM63BQ5T3F8 832 aa28.44■■■□□ 2.14
PTPRJ-205ENST00000527952 TTBK2Q6IQ55 1244 aa28.44■■■□□ 2.14
PTPRJ-205ENST00000527952 MAFAQ8NHW3 353 aaPredicted RBP28.44■■■□□ 2.14
PTPRJ-205ENST00000527952 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.44■■■□□ 2.14
PTPRJ-205ENST00000527952 PPP1R12CQ9BZL4 782 aa28.44■■■□□ 2.14
PTPRJ-205ENST00000527952 PDGFCQ9NRA1 345 aa28.44■■■□□ 2.14
PTPRJ-205ENST00000527952 A0A0U1RQG5 324 aaPredicted RBP28.43■■■□□ 2.14
PTPRJ-205ENST00000527952 ARVCFO00192 962 aa28.43■■■□□ 2.14
PTPRJ-205ENST00000527952 SLC16A2P36021 539 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms