RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 TBC1D10CQ8IV04 446 aa13.87□□□□□ -0.19
TSKU-203ENST00000527881 ZNF579Q8NAF0 562 aaKnown RBP13.87□□□□□ -0.19
TSKU-203ENST00000527881 OSBPL7Q9BZF2 842 aa13.87□□□□□ -0.19
TSKU-203ENST00000527881 TSGA10Q9BZW7 698 aa13.87□□□□□ -0.19
TSKU-203ENST00000527881 YIPF3Q9GZM5 350 aa13.87□□□□□ -0.19
TSKU-203ENST00000527881 NOD2Q9HC29 1040 aa13.87□□□□□ -0.19
TSKU-203ENST00000527881 RWDD2AQ9UIY3 292 aa13.87□□□□□ -0.19
TSKU-203ENST00000527881 IDH1O75874 414 aaKnown RBP13.87□□□□□ -0.19
TSKU-203ENST00000527881 KIF4AO95239 1232 aa13.87□□□□□ -0.19
TSKU-203ENST00000527881 PI16Q6UXB8 463 aa13.87□□□□□ -0.19
TSKU-203ENST00000527881 APPBP2Q92624 585 aa13.87□□□□□ -0.19
TSKU-203ENST00000527881 PLCD4Q9BRC7 762 aa13.87□□□□□ -0.19
TSKU-203ENST00000527881 STRN4Q9NRL3 753 aa13.87□□□□□ -0.19
TSKU-203ENST00000527881 hCG_1642624A0A1W2PR95 340 aa13.87□□□□□ -0.19
TSKU-203ENST00000527881 KCNB1Q14721 858 aa13.87□□□□□ -0.19
TSKU-203ENST00000527881 RBBP5Q15291 538 aaKnown RBP13.87□□□□□ -0.19
TSKU-203ENST00000527881 RTN1Q16799 776 aa13.87□□□□□ -0.19
TSKU-203ENST00000527881 CAPRIN2Q6IMN6 1127 aaKnown RBP13.87□□□□□ -0.19
TSKU-203ENST00000527881 WDR59Q6PJI9 974 aa13.87□□□□□ -0.19
TSKU-203ENST00000527881 OR2W6PQ8NHA6 318 aa13.87□□□□□ -0.19
TSKU-203ENST00000527881 ZNF483Q8TF39 744 aaPredicted RBP13.87□□□□□ -0.19
TSKU-203ENST00000527881 SEC16BQ96JE7 1060 aa13.87□□□□□ -0.19
TSKU-203ENST00000527881 RGPD1P0DJD0 1748 aa13.87□□□□□ -0.19
TSKU-203ENST00000527881 ANKARQ7Z5J8 1434 aa13.87□□□□□ -0.19
TSKU-203ENST00000527881 CPDO75976 1380 aa13.86□□□□□ -0.19
TSKU-203ENST00000527881 AP1G2O75843 785 aa13.86□□□□□ -0.19
TSKU-203ENST00000527881 ZFYP08048 801 aaPredicted RBP13.86□□□□□ -0.19
TSKU-203ENST00000527881 MTIF2P46199 727 aaKnown RBP13.86□□□□□ -0.19
TSKU-203ENST00000527881 SPATA20Q8TB22 786 aa13.86□□□□□ -0.19
TSKU-203ENST00000527881 LMBR1Q8WVP7 490 aa13.86□□□□□ -0.19
TSKU-203ENST00000527881 KDM6AO15550 1401 aaPredicted RBP13.86□□□□□ -0.19
TSKU-203ENST00000527881 LAMA4Q16363 1823 aa13.86□□□□□ -0.19
TSKU-203ENST00000527881 BUB1O43683 1085 aa13.86□□□□□ -0.19
TSKU-203ENST00000527881 GLI1P08151 1106 aa13.86□□□□□ -0.19
TSKU-203ENST00000527881 CSB-PGBD3P0DP91 1061 aa13.86□□□□□ -0.19
TSKU-203ENST00000527881 KLHL7Q8IXQ5 586 aa13.86□□□□□ -0.19
TSKU-203ENST00000527881 PARD3BQ8TEW8 1205 aa13.86□□□□□ -0.19
TSKU-203ENST00000527881 CAVIN3Q969G5 261 aa13.86□□□□□ -0.19
TSKU-203ENST00000527881 KRT12Q99456 494 aa13.86□□□□□ -0.19
TSKU-203ENST00000527881 IL15P40933 162 aaPredicted RBP13.86□□□□□ -0.19
TSKU-203ENST00000527881 SSR1P43307 286 aaKnown RBP13.86□□□□□ -0.19
TSKU-203ENST00000527881 ZAP70P43403 619 aa13.86□□□□□ -0.19
TSKU-203ENST00000527881 KLK7P49862 253 aa13.86□□□□□ -0.19
TSKU-203ENST00000527881 QPCTQ16769 361 aa13.86□□□□□ -0.19
TSKU-203ENST00000527881 TMED8Q6PL24 325 aaPredicted RBP13.86□□□□□ -0.19
TSKU-203ENST00000527881 SPAG5Q96R06 1193 aa13.86□□□□□ -0.19
TSKU-203ENST00000527881 CAPN11Q9UMQ6 739 aa13.86□□□□□ -0.19
TSKU-203ENST00000527881 L3MBTL1Q9Y468 752 aa13.86□□□□□ -0.19
TSKU-203ENST00000527881 OVOS2A0A0G2JMS6 1433 aa13.86□□□□□ -0.19
TSKU-203ENST00000527881 LGALS16A8MUM7 142 aa13.85□□□□□ -0.19
TSKU-203ENST00000527881 PHF20L1A8MW92 1017 aa13.85□□□□□ -0.19
TSKU-203ENST00000527881 CFAP221Q4G0U5 840 aa13.85□□□□□ -0.19
TSKU-203ENST00000527881 TBC1D1Q86TI0 1168 aaPredicted RBP13.85□□□□□ -0.19
TSKU-203ENST00000527881 C2CD5Q86YS7 1000 aa13.85□□□□□ -0.19
TSKU-203ENST00000527881 CCDC63Q8NA47 563 aa13.85□□□□□ -0.19
TSKU-203ENST00000527881 DNAJC7Q99615 494 aa13.85□□□□□ -0.19
TSKU-203ENST00000527881 FOXP1Q9H334 677 aaPredicted RBP13.85□□□□□ -0.19
TSKU-203ENST00000527881 ERICH2A1L162 156 aa13.85□□□□□ -0.19
TSKU-203ENST00000527881 UBLCP1Q8WVY7 318 aaPredicted RBP13.85□□□□□ -0.19
TSKU-203ENST00000527881 LEMD3Q9Y2U8 911 aa13.85□□□□□ -0.19
TSKU-203ENST00000527881 RTN2O75298 545 aa13.84□□□□□ -0.19
TSKU-203ENST00000527881 FMNL1O95466 1100 aaPredicted RBP13.84□□□□□ -0.19
TSKU-203ENST00000527881 ATP6V1G2O95670 118 aa13.84□□□□□ -0.19
TSKU-203ENST00000527881 PLEKP08567 350 aaPredicted RBP13.84□□□□□ -0.19
TSKU-203ENST00000527881 XBP1P17861 261 aa13.84□□□□□ -0.19
TSKU-203ENST00000527881 NBPF20Q3BBV1 942 aa13.84□□□□□ -0.19
TSKU-203ENST00000527881 CUL5Q93034 780 aa13.84□□□□□ -0.19
TSKU-203ENST00000527881 TMEM87BQ96K49 555 aa13.84□□□□□ -0.19
TSKU-203ENST00000527881 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.84□□□□□ -0.19
TSKU-203ENST00000527881 AATFQ9NY61 560 aaKnown RBP eCLIP13.84□□□□□ -0.19
TSKU-203ENST00000527881 IRF6O14896 467 aa13.84□□□□□ -0.19
TSKU-203ENST00000527881 ADORA1P30542 326 aa13.84□□□□□ -0.19
TSKU-203ENST00000527881 CTNNA1P35221 906 aaKnown RBP13.84□□□□□ -0.19
TSKU-203ENST00000527881 PRCPP42785 496 aa13.84□□□□□ -0.19
TSKU-203ENST00000527881 SLC8A3P57103 927 aa13.84□□□□□ -0.19
TSKU-203ENST00000527881 NTRK3Q16288 839 aa13.84□□□□□ -0.19
TSKU-203ENST00000527881 NBPF9Q3BBW0 867 aa13.84□□□□□ -0.19
TSKU-203ENST00000527881 RCSD1Q6JBY9 416 aa13.84□□□□□ -0.19
TSKU-203ENST00000527881 IQCKQ8N0W5 287 aa13.84□□□□□ -0.19
TSKU-203ENST00000527881 SPDYE1Q8NFV5 336 aaPredicted RBP13.84□□□□□ -0.19
TSKU-203ENST00000527881 NKX2-3Q8TAU0 364 aa13.84□□□□□ -0.19
TSKU-203ENST00000527881 HOOK2Q96ED9 719 aa13.84□□□□□ -0.19
TSKU-203ENST00000527881 SETD1BQ9UPS6 1966 aaKnown RBP13.84□□□□□ -0.19
TSKU-203ENST00000527881 GLE1Q53GS7 698 aaKnown RBP13.84□□□□□ -0.19
TSKU-203ENST00000527881 PPP4R3AQ6IN85 833 aa13.84□□□□□ -0.19
TSKU-203ENST00000527881 LMOD2Q6P5Q4 547 aa13.84□□□□□ -0.19
TSKU-203ENST00000527881 IRAK4Q9NWZ3 460 aa13.84□□□□□ -0.19
TSKU-203ENST00000527881 N4BP2Q86UW6 1770 aaPredicted RBP13.84□□□□□ -0.19
TSKU-203ENST00000527881 LRRC10BA6NIK2 292 aa13.83□□□□□ -0.19
TSKU-203ENST00000527881 H7C1D1 291 aa13.83□□□□□ -0.19
TSKU-203ENST00000527881 FOXP2O15409 715 aa13.83□□□□□ -0.19
TSKU-203ENST00000527881 CCDC170Q8IYT3 715 aa13.83□□□□□ -0.19
TSKU-203ENST00000527881 PUS3Q9BZE2 481 aaKnown RBP13.83□□□□□ -0.19
TSKU-203ENST00000527881 RMND1Q9NWS8 449 aa13.83□□□□□ -0.19
TSKU-203ENST00000527881 MAP3K15Q6ZN16 1313 aa13.83□□□□□ -0.19
TSKU-203ENST00000527881 ANP32DO95626 131 aa13.83□□□□□ -0.2
TSKU-203ENST00000527881 MAGEA1P43355 309 aa13.83□□□□□ -0.2
TSKU-203ENST00000527881 DNM2P50570 870 aa13.83□□□□□ -0.2
TSKU-203ENST00000527881 ITGB3BPQ13352 177 aaPredicted RBP13.83□□□□□ -0.2
TSKU-203ENST00000527881 FAM133BQ5BKY9 247 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms