RNA–Protein interactions for RNA: ENST00000527792.5

LTBP3-209, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-209ENST00000527792 SMARCA1P28370 1054 aa17.79■□□□□ 0.44
LTBP3-209ENST00000527792 SNAP25P60880 206 aa17.79■□□□□ 0.44
LTBP3-209ENST00000527792 MOGSQ13724 837 aa17.79■□□□□ 0.44
LTBP3-209ENST00000527792 COG2Q14746 738 aa17.79■□□□□ 0.44
LTBP3-209ENST00000527792 BTNL9Q6UXG8 535 aa17.79■□□□□ 0.44
LTBP3-209ENST00000527792 PRPF38AQ8NAV1 312 aaKnown RBP17.79■□□□□ 0.44
LTBP3-209ENST00000527792 INTS4Q96HW7 963 aaKnown RBP17.79■□□□□ 0.44
LTBP3-209ENST00000527792 IPO9Q96P70 1041 aaKnown RBP17.79■□□□□ 0.44
LTBP3-209ENST00000527792 SEC63Q9UGP8 760 aaKnown RBP17.79■□□□□ 0.44
LTBP3-209ENST00000527792 TRIM17Q9Y577 477 aa17.79■□□□□ 0.44
LTBP3-209ENST00000527792 BTBD19C9JJ37 291 aa17.78■□□□□ 0.44
LTBP3-209ENST00000527792 PDHXO00330 501 aa17.78■□□□□ 0.44
LTBP3-209ENST00000527792 PRPF3O43395 683 aaKnown RBP17.78■□□□□ 0.44
LTBP3-209ENST00000527792 CYTH3O43739 400 aa17.78■□□□□ 0.44
LTBP3-209ENST00000527792 PLA2G6O60733 806 aa17.78■□□□□ 0.44
LTBP3-209ENST00000527792 GJB2P29033 226 aa17.78■□□□□ 0.44
LTBP3-209ENST00000527792 HMGN5P82970 282 aaKnown RBP17.78■□□□□ 0.44
LTBP3-209ENST00000527792 GPAT2Q6NUI2 795 aa17.78■□□□□ 0.44
LTBP3-209ENST00000527792 PIGSQ96S52 555 aa17.78■□□□□ 0.44
LTBP3-209ENST00000527792 RNF26Q9BY78 433 aaPredicted RBP17.78■□□□□ 0.44
LTBP3-209ENST00000527792 RIOX1Q9H6W3 641 aa17.78■□□□□ 0.44
LTBP3-209ENST00000527792 JMJD4Q9H9V9 463 aa17.78■□□□□ 0.44
LTBP3-209ENST00000527792 PNMA3Q9UL41 463 aa17.78■□□□□ 0.44
LTBP3-209ENST00000527792 PPP1R9AQ9ULJ8 1098 aa17.78■□□□□ 0.44
LTBP3-209ENST00000527792 IGF2BP3O00425 579 aaKnown RBP eCLIP17.77■□□□□ 0.44
LTBP3-209ENST00000527792 ZBED4O75132 1171 aa17.77■□□□□ 0.44
LTBP3-209ENST00000527792 HOXA7P31268 230 aaPredicted RBP17.77■□□□□ 0.44
LTBP3-209ENST00000527792 DSG3P32926 999 aa17.77■□□□□ 0.44
LTBP3-209ENST00000527792 FOSBP53539 338 aa17.77■□□□□ 0.44
LTBP3-209ENST00000527792 FUT2Q10981 343 aa17.77■□□□□ 0.44
LTBP3-209ENST00000527792 CDC37Q16543 378 aaPredicted RBP17.77■□□□□ 0.44
LTBP3-209ENST00000527792 SLC35G1Q2M3R5 365 aa17.77■□□□□ 0.44
LTBP3-209ENST00000527792 CCDC174Q6PII3 467 aa17.77■□□□□ 0.44
LTBP3-209ENST00000527792 OTOP1Q7RTM1 612 aa17.77■□□□□ 0.44
LTBP3-209ENST00000527792 ANKRD23Q86SG2 305 aa17.77■□□□□ 0.44
LTBP3-209ENST00000527792 SMARCC2Q8TAQ2 1214 aa17.77■□□□□ 0.44
LTBP3-209ENST00000527792 WASF1Q92558 559 aa17.77■□□□□ 0.44
LTBP3-209ENST00000527792 HOXC10Q9NYD6 342 aa17.77■□□□□ 0.44
LTBP3-209ENST00000527792 RBM27Q9P2N5 1060 aaKnown RBP17.77■□□□□ 0.44
LTBP3-209ENST00000527792 STK36Q9NRP7 1315 aa17.76■□□□□ 0.43
LTBP3-209ENST00000527792 DEXIO95424 95 aa17.76■□□□□ 0.43
LTBP3-209ENST00000527792 OTUD7BQ6GQQ9 843 aa17.76■□□□□ 0.43
LTBP3-209ENST00000527792 FAM43AQ8N2R8 423 aa17.76■□□□□ 0.43
LTBP3-209ENST00000527792 ATG4CQ96DT6 458 aa17.76■□□□□ 0.43
LTBP3-209ENST00000527792 P2RX7Q99572 595 aaKnown RBP17.76■□□□□ 0.43
LTBP3-209ENST00000527792 ASCC2Q9H1I8 757 aaPredicted RBP17.76■□□□□ 0.43
LTBP3-209ENST00000527792 KIF3AQ9Y496 699 aa17.76■□□□□ 0.43
LTBP3-209ENST00000527792 TESPA1A2RU30 521 aaPredicted RBP17.75■□□□□ 0.43
LTBP3-209ENST00000527792 ZBTB5O15062 677 aa17.75■□□□□ 0.43
LTBP3-209ENST00000527792 QRICH1Q2TAL8 776 aa17.75■□□□□ 0.43
LTBP3-209ENST00000527792 HEATR3Q7Z4Q2 680 aa17.75■□□□□ 0.43
LTBP3-209ENST00000527792 CPXCR1Q8N123 301 aa17.75■□□□□ 0.43
LTBP3-209ENST00000527792 PTPN18Q99952 460 aa17.75■□□□□ 0.43
LTBP3-209ENST00000527792 ALG1Q9BT22 464 aa17.75■□□□□ 0.43
LTBP3-209ENST00000527792 RANBP17Q9H2T7 1088 aaKnown RBP17.75■□□□□ 0.43
LTBP3-209ENST00000527792 SLC45A1Q9Y2W3 748 aa17.75■□□□□ 0.43
LTBP3-209ENST00000527792 MYPNQ86TC9 1320 aa17.74■□□□□ 0.43
LTBP3-209ENST00000527792 PNMA6FA0A0J9YX94 578 aa17.74■□□□□ 0.43
LTBP3-209ENST00000527792 POTEFA5A3E0 1075 aa17.74■□□□□ 0.43
LTBP3-209ENST00000527792 SPDYE16A6NNV3 312 aaPredicted RBP17.74■□□□□ 0.43
LTBP3-209ENST00000527792 FDX1P10109 184 aa17.74■□□□□ 0.43
LTBP3-209ENST00000527792 CYP2C8P10632 490 aa17.74■□□□□ 0.43
LTBP3-209ENST00000527792 SCG2P13521 617 aa17.74■□□□□ 0.43
LTBP3-209ENST00000527792 FDPSP14324 419 aaKnown RBP17.74■□□□□ 0.43
LTBP3-209ENST00000527792 PFKFB3Q16875 520 aaPredicted RBP17.74■□□□□ 0.43
LTBP3-209ENST00000527792 SMCR8Q8TEV9 937 aaPredicted RBP17.74■□□□□ 0.43
LTBP3-209ENST00000527792 VWA5AO00534 786 aa17.73■□□□□ 0.43
LTBP3-209ENST00000527792 HERVK_113P62684 666 aa17.73■□□□□ 0.43
LTBP3-209ENST00000527792 CRHR2Q13324 411 aa17.73■□□□□ 0.43
LTBP3-209ENST00000527792 TRIM29Q14134 588 aa17.73■□□□□ 0.43
LTBP3-209ENST00000527792 PLS1Q14651 629 aa17.73■□□□□ 0.43
LTBP3-209ENST00000527792 USH1GQ495M9 461 aa17.73■□□□□ 0.43
LTBP3-209ENST00000527792 FBXO11Q86XK2 927 aa17.73■□□□□ 0.43
LTBP3-209ENST00000527792 GPKOWQ92917 476 aaPredicted RBP eCLIP17.73■□□□□ 0.43
LTBP3-209ENST00000527792 MTMR8Q96EF0 704 aa17.73■□□□□ 0.43
LTBP3-209ENST00000527792 ERO1AQ96HE7 468 aa17.73■□□□□ 0.43
LTBP3-209ENST00000527792 AIFM3Q96NN9 605 aa17.73■□□□□ 0.43
LTBP3-209ENST00000527792 PARK7Q99497 189 aaKnown RBP17.73■□□□□ 0.43
LTBP3-209ENST00000527792 PAGR1Q9BTK6 254 aa17.73■□□□□ 0.43
LTBP3-209ENST00000527792 CWC22Q9HCG8 908 aaKnown RBP17.73■□□□□ 0.43
LTBP3-209ENST00000527792 RAVER2Q9HCJ3 691 aaKnown RBP17.73■□□□□ 0.43
LTBP3-209ENST00000527792 PTPN22Q9Y2R2 807 aa17.73■□□□□ 0.43
LTBP3-209ENST00000527792 XBP1P17861 261 aa17.72■□□□□ 0.43
LTBP3-209ENST00000527792 TAF1CQ15572 869 aaPredicted RBP17.72■□□□□ 0.43
LTBP3-209ENST00000527792 PKN1Q16512 942 aa17.72■□□□□ 0.43
LTBP3-209ENST00000527792 LARP1BQ659C4 914 aaKnown RBP17.72■□□□□ 0.43
LTBP3-209ENST00000527792 CD99L2Q8TCZ2 262 aa17.72■□□□□ 0.43
LTBP3-209ENST00000527792 COA7Q96BR5 231 aa17.72■□□□□ 0.43
LTBP3-209ENST00000527792 C8orf76Q96K31 380 aa17.72■□□□□ 0.43
LTBP3-209ENST00000527792 AMNQ9BXJ7 453 aa17.72■□□□□ 0.43
LTBP3-209ENST00000527792 SLC38A10Q9HBR0 1119 aa17.72■□□□□ 0.43
LTBP3-209ENST00000527792 CCPG1Q9ULG6 757 aa17.72■□□□□ 0.43
LTBP3-209ENST00000527792 NAPAP54920 295 aa17.71■□□□□ 0.43
LTBP3-209ENST00000527792 TRAF1Q13077 416 aa17.71■□□□□ 0.43
LTBP3-209ENST00000527792 WWC2Q6AWC2 1192 aa17.71■□□□□ 0.43
LTBP3-209ENST00000527792 GTF3C2Q8WUA4 911 aaPredicted RBP17.71■□□□□ 0.43
LTBP3-209ENST00000527792 AGBL1Q96MI9 1066 aa17.71■□□□□ 0.43
LTBP3-209ENST00000527792 EFCC1Q9HA90 598 aa17.71■□□□□ 0.43
LTBP3-209ENST00000527792 VPS54Q9P1Q0 977 aa17.71■□□□□ 0.43
LTBP3-209ENST00000527792 ADAMTS5Q9UNA0 930 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms