RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 MKNK2Q9HBH9 465 aa11.87□□□□□ -0.51
CAPN1-210ENST00000527699 GOPCQ9HD26 462 aa11.87□□□□□ -0.51
CAPN1-210ENST00000527699 CLIP2Q9UDT6 1046 aa11.87□□□□□ -0.51
CAPN1-210ENST00000527699 ZHX1Q9UKY1 873 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-210ENST00000527699 PPP1R9AQ9ULJ8 1098 aa11.87□□□□□ -0.51
CAPN1-210ENST00000527699 RIPK3Q9Y572 518 aa11.87□□□□□ -0.51
CAPN1-210ENST00000527699 ZBED9Q6R2W3 1325 aa11.86□□□□□ -0.51
CAPN1-210ENST00000527699 A0A1W2PQ45 241 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-210ENST00000527699 A0A1W2PQY0 241 aa11.86□□□□□ -0.51
CAPN1-210ENST00000527699 MYADML2A6NDP7 307 aa11.86□□□□□ -0.51
CAPN1-210ENST00000527699 RFXAPO00287 272 aa11.86□□□□□ -0.51
CAPN1-210ENST00000527699 PTPN5P54829 565 aa11.86□□□□□ -0.51
CAPN1-210ENST00000527699 PPIGQ13427 754 aaKnown RBP eCLIP11.86□□□□□ -0.513e-6■■■□□ 18.1
CAPN1-210ENST00000527699 TMED8Q6PL24 325 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-210ENST00000527699 DDX11Q96FC9 970 aa11.86□□□□□ -0.51
CAPN1-210ENST00000527699 MFSD14AQ96MC6 490 aa11.86□□□□□ -0.51
CAPN1-210ENST00000527699 LRRCC1Q9C099 1032 aa11.86□□□□□ -0.51
CAPN1-210ENST00000527699 KANSL2Q9H9L4 492 aa11.86□□□□□ -0.51
CAPN1-210ENST00000527699 RAVER2Q9HCJ3 691 aaKnown RBP11.86□□□□□ -0.51
CAPN1-210ENST00000527699 YBX2Q9Y2T7 364 aaKnown RBP11.86□□□□□ -0.51
CAPN1-210ENST00000527699 CTDP1Q9Y5B0 961 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-210ENST00000527699 MYH8P13535 1937 aa11.86□□□□□ -0.51
CAPN1-210ENST00000527699 COL11A1P12107 1806 aaPredicted RBP11.86□□□□□ -0.51
CAPN1-210ENST00000527699 CHD7Q9P2D1 2997 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 M0R2C6 588 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 APPP05067 770 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 ZNF865P0CJ78 1059 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-210ENST00000527699 ACRP10323 421 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 MS4A1P11836 297 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 RASA1P20936 1047 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 SNAP25P60880 206 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 UBE3CQ15386 1083 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 TMEM240Q5SV17 173 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 RNF180Q86T96 592 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 ABRAQ8N0Z2 381 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 LRRC47Q8N1G4 583 aaKnown RBP11.85□□□□□ -0.51
CAPN1-210ENST00000527699 REPS2Q8NFH8 660 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 OSBP2Q969R2 916 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 VTI1AQ96AJ9 217 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 STRBPQ96SI9 672 aaKnown RBP11.85□□□□□ -0.51
CAPN1-210ENST00000527699 SLF1Q9BQI6 1058 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 HOMER2Q9NSB8 354 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 FAM86C1Q9NVL1 165 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 ZNF214Q9UL59 606 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-210ENST00000527699 PHF24Q9UPV7 400 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 MTMR7Q9Y216 660 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 MTCH2Q9Y6C9 303 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 DDX49Q9Y6V7 483 aaKnown RBP11.85□□□□□ -0.51
CAPN1-210ENST00000527699 ZNF236Q9UL36 1845 aa11.85□□□□□ -0.51
CAPN1-210ENST00000527699 C5orf42Q9H799 3197 aa11.84□□□□□ -0.51
CAPN1-210ENST00000527699 GSG1L2A8MUP6 293 aa11.84□□□□□ -0.51
CAPN1-210ENST00000527699 F5H6K3 240 aa11.84□□□□□ -0.51
CAPN1-210ENST00000527699 DCXO43602 365 aa11.84□□□□□ -0.51
CAPN1-210ENST00000527699 SNAI1O95863 264 aaPredicted RBP11.84□□□□□ -0.51
CAPN1-210ENST00000527699 NDUFB10O96000 172 aa11.84□□□□□ -0.51
CAPN1-210ENST00000527699 PTGS1P23219 599 aa11.84□□□□□ -0.51
CAPN1-210ENST00000527699 KLRC3Q07444 240 aa11.84□□□□□ -0.51
CAPN1-210ENST00000527699 KCNA10Q16322 511 aa11.84□□□□□ -0.51
CAPN1-210ENST00000527699 KRT40Q6A162 431 aa11.84□□□□□ -0.51
CAPN1-210ENST00000527699 ZSCAN25Q6NSZ9 544 aa11.84□□□□□ -0.51
CAPN1-210ENST00000527699 HFE2Q6ZVN8 426 aa11.84□□□□□ -0.51
CAPN1-210ENST00000527699 PRSS33Q8NF86 280 aa11.84□□□□□ -0.51
CAPN1-210ENST00000527699 SEC62Q99442 399 aaKnown RBP11.84□□□□□ -0.51
CAPN1-210ENST00000527699 MTIF3Q9H2K0 278 aaKnown RBP11.84□□□□□ -0.51
CAPN1-210ENST00000527699 CERS4Q9HA82 394 aa11.84□□□□□ -0.51
CAPN1-210ENST00000527699 RCAN3Q9UKA8 241 aa11.84□□□□□ -0.51
CAPN1-210ENST00000527699 ADAMTS5Q9UNA0 930 aa11.84□□□□□ -0.51
CAPN1-210ENST00000527699 CNPY2Q9Y2B0 182 aa11.84□□□□□ -0.51
CAPN1-210ENST00000527699 BRWD1Q9NSI6 2320 aa11.84□□□□□ -0.51
CAPN1-210ENST00000527699 ZNFX1Q9P2E3 1918 aaKnown RBP11.84□□□□□ -0.51
CAPN1-210ENST00000527699 SYNRGQ9UMZ2 1314 aa11.84□□□□□ -0.51
CAPN1-210ENST00000527699 DCDC2CA8MYV0 355 aa11.83□□□□□ -0.52
CAPN1-210ENST00000527699 ADCY6O43306 1168 aa11.83□□□□□ -0.52
CAPN1-210ENST00000527699 AKR1A1P14550 325 aa11.83□□□□□ -0.52
CAPN1-210ENST00000527699 TDO2P48775 406 aa11.83□□□□□ -0.52
CAPN1-210ENST00000527699 RABGGTBP53611 331 aa11.83□□□□□ -0.52
CAPN1-210ENST00000527699 C1orf53Q5VUE5 145 aa11.83□□□□□ -0.52
CAPN1-210ENST00000527699 PSRC1Q6PGN9 363 aaPredicted RBP11.83□□□□□ -0.52
CAPN1-210ENST00000527699 ZNF365Q70YC5 407 aa11.83□□□□□ -0.52
CAPN1-210ENST00000527699 EPB41L4AQ9HCS5 686 aaPredicted RBP11.83□□□□□ -0.52
CAPN1-210ENST00000527699 STARD7Q9NQZ5 370 aa11.83□□□□□ -0.52
CAPN1-210ENST00000527699 ECHDC1Q9NTX5 307 aa11.83□□□□□ -0.52
CAPN1-210ENST00000527699 ARPP21Q9UBL0 812 aaPredicted RBP11.83□□□□□ -0.52
CAPN1-210ENST00000527699 FAM184BQ9ULE4 1060 aa11.83□□□□□ -0.52
CAPN1-210ENST00000527699 PARP14Q460N5 1801 aa11.82□□□□□ -0.52
CAPN1-210ENST00000527699 RNF113AO15541 343 aaKnown RBP11.82□□□□□ -0.52
CAPN1-210ENST00000527699 ZBED4O75132 1171 aa11.82□□□□□ -0.52
CAPN1-210ENST00000527699 TIMP1P01033 207 aa11.82□□□□□ -0.52
CAPN1-210ENST00000527699 C6orf222P0C671 652 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-210ENST00000527699 ID4P47928 161 aa11.82□□□□□ -0.52
CAPN1-210ENST00000527699 ACLYP53396 1101 aa11.82□□□□□ -0.52
CAPN1-210ENST00000527699 FAAP100Q0VG06 881 aa11.82□□□□□ -0.52
CAPN1-210ENST00000527699 FAM178BQ8IXR5 827 aa11.82□□□□□ -0.52
CAPN1-210ENST00000527699 ZNF444Q8N0Y2 327 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-210ENST00000527699 ANKRD35Q8N283 1001 aa11.82□□□□□ -0.52
CAPN1-210ENST00000527699 PPP1R12CQ9BZL4 782 aa11.82□□□□□ -0.52
CAPN1-210ENST00000527699 INCENPQ9NQS7 918 aa11.82□□□□□ -0.52
CAPN1-210ENST00000527699 EPG5Q9HCE0 2579 aa11.82□□□□□ -0.52
CAPN1-210ENST00000527699 SMCHD1A6NHR9 2005 aa11.82□□□□□ -0.52
CAPN1-210ENST00000527699 GPAA1O43292 621 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms