RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 VPS53Q5VIR6 699 aa26.5■■□□□ 1.83
TRAPPC4-208ENST00000527680 RCSD1Q6JBY9 416 aa26.5■■□□□ 1.83
TRAPPC4-208ENST00000527680 KCTD1Q719H9 257 aa26.5■■□□□ 1.83
TRAPPC4-208ENST00000527680 VTI1AQ96AJ9 217 aa26.5■■□□□ 1.83
TRAPPC4-208ENST00000527680 AGBL1Q96MI9 1066 aa26.5■■□□□ 1.83
TRAPPC4-208ENST00000527680 ACAD9Q9H845 621 aa26.5■■□□□ 1.83
TRAPPC4-208ENST00000527680 SPC25Q9HBM1 224 aa26.5■■□□□ 1.83
TRAPPC4-208ENST00000527680 SALL3Q9BXA9 1300 aa26.49■■□□□ 1.83
TRAPPC4-208ENST00000527680 SYNRGQ9UMZ2 1314 aa26.49■■□□□ 1.83
TRAPPC4-208ENST00000527680 POTEB2H3BUK9 544 aa26.49■■□□□ 1.83
TRAPPC4-208ENST00000527680 DUSP11O75319 330 aaKnown RBP26.49■■□□□ 1.83
TRAPPC4-208ENST00000527680 KCNA10Q16322 511 aa26.49■■□□□ 1.83
TRAPPC4-208ENST00000527680 IL17RBQ9NRM6 502 aa26.49■■□□□ 1.83
TRAPPC4-208ENST00000527680 TMEM39AQ9NV64 488 aa26.49■■□□□ 1.83
TRAPPC4-208ENST00000527680 STXBP5LQ9Y2K9 1186 aa26.49■■□□□ 1.83
TRAPPC4-208ENST00000527680 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.49■■□□□ 1.83
TRAPPC4-208ENST00000527680 C6orf222P0C671 652 aaPredicted RBP26.48■■□□□ 1.83
TRAPPC4-208ENST00000527680 ALAS1P13196 640 aa26.48■■□□□ 1.83
TRAPPC4-208ENST00000527680 RAG1P15918 1043 aa26.48■■□□□ 1.83
TRAPPC4-208ENST00000527680 CNTN2Q02246 1040 aa26.48■■□□□ 1.83
TRAPPC4-208ENST00000527680 HDAC1Q13547 482 aaPredicted RBP26.48■■□□□ 1.83
TRAPPC4-208ENST00000527680 CCDC144BQ3MJ40 725 aa26.48■■□□□ 1.83
TRAPPC4-208ENST00000527680 CCDC174Q6PII3 467 aa26.48■■□□□ 1.83
TRAPPC4-208ENST00000527680 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.48■■□□□ 1.83
TRAPPC4-208ENST00000527680 ARMCX2Q7L311 632 aa26.48■■□□□ 1.83
TRAPPC4-208ENST00000527680 FAM161BQ96MY7 647 aa26.48■■□□□ 1.83
TRAPPC4-208ENST00000527680 TRERF1Q96PN7 1200 aa26.48■■□□□ 1.83
TRAPPC4-208ENST00000527680 RNF146Q9NTX7 359 aa26.48■■□□□ 1.83
TRAPPC4-208ENST00000527680 MOXD2PA6NHM9 499 aa26.47■■□□□ 1.83
TRAPPC4-208ENST00000527680 DCDC2CA8MYV0 355 aa26.47■■□□□ 1.83
TRAPPC4-208ENST00000527680 TRIM6-TRIM34B2RNG4 842 aa26.47■■□□□ 1.83
TRAPPC4-208ENST00000527680 FOXP2O15409 715 aa26.47■■□□□ 1.83
TRAPPC4-208ENST00000527680 SNAP25P60880 206 aa26.47■■□□□ 1.83
TRAPPC4-208ENST00000527680 MCMDC2Q4G0Z9 681 aa26.47■■□□□ 1.83
TRAPPC4-208ENST00000527680 RRP12Q5JTH9 1297 aaKnown RBP26.47■■□□□ 1.83
TRAPPC4-208ENST00000527680 C9orf50Q5SZB4 431 aa26.47■■□□□ 1.83
TRAPPC4-208ENST00000527680 NOL8Q76FK4 1167 aaKnown RBP26.47■■□□□ 1.83
TRAPPC4-208ENST00000527680 CCDC144CPQ8IYA2 1237 aa26.47■■□□□ 1.83
TRAPPC4-208ENST00000527680 KLHDC9Q8NEP7 349 aa26.47■■□□□ 1.83
TRAPPC4-208ENST00000527680 ANAPC4Q9UJX5 808 aa26.47■■□□□ 1.83
TRAPPC4-208ENST00000527680 MCM3APO60318 1980 aa26.46■■□□□ 1.83
TRAPPC4-208ENST00000527680 CCDC96Q2M329 555 aa26.46■■□□□ 1.83
TRAPPC4-208ENST00000527680 TKFCQ3LXA3 575 aa26.46■■□□□ 1.83
TRAPPC4-208ENST00000527680 PCSK9Q8NBP7 692 aaKnown RBP26.46■■□□□ 1.83
TRAPPC4-208ENST00000527680 FAM227BQ96M60 508 aa26.46■■□□□ 1.83
TRAPPC4-208ENST00000527680 GLT1D1Q96MS3 346 aa26.46■■□□□ 1.83
TRAPPC4-208ENST00000527680 LTBP2Q14767 1821 aa26.46■■□□□ 1.83
TRAPPC4-208ENST00000527680 PLA2G6O60733 806 aa26.45■■□□□ 1.82
TRAPPC4-208ENST00000527680 ALX1Q15699 326 aa26.45■■□□□ 1.82
TRAPPC4-208ENST00000527680 GNASQ5JWF2 1037 aa26.45■■□□□ 1.82
TRAPPC4-208ENST00000527680 FAM109BQ6ICB4 259 aaPredicted RBP26.45■■□□□ 1.82
TRAPPC4-208ENST00000527680 RILPL2Q969X0 211 aa26.45■■□□□ 1.82
TRAPPC4-208ENST00000527680 FGD4Q96M96 766 aa26.45■■□□□ 1.82
TRAPPC4-208ENST00000527680 LNPKQ9C0E8 428 aa26.45■■□□□ 1.82
TRAPPC4-208ENST00000527680 PRR12Q9ULL5 1215 aa26.45■■□□□ 1.82
TRAPPC4-208ENST00000527680 ZNF536O15090 1300 aa26.44■■□□□ 1.82
TRAPPC4-208ENST00000527680 DLL1O00548 723 aa26.44■■□□□ 1.82
TRAPPC4-208ENST00000527680 ORC4O43929 436 aa26.44■■□□□ 1.82
TRAPPC4-208ENST00000527680 FGAP02671 866 aa26.44■■□□□ 1.82
TRAPPC4-208ENST00000527680 ZNF697Q5TEC3 545 aa26.44■■□□□ 1.82
TRAPPC4-208ENST00000527680 YTHDC1Q96MU7 727 aaKnown RBP26.44■■□□□ 1.82
TRAPPC4-208ENST00000527680 A1CFQ9NQ94 594 aaKnown RBP26.44■■□□□ 1.82
TRAPPC4-208ENST00000527680 COL6A3P12111 3177 aa26.43■■□□□ 1.82
TRAPPC4-208ENST00000527680 MYADML2A6NDP7 307 aa26.43■■□□□ 1.82
TRAPPC4-208ENST00000527680 ASB14A6NK59 587 aa26.43■■□□□ 1.82
TRAPPC4-208ENST00000527680 KIAA0355O15063 1070 aa26.43■■□□□ 1.82
TRAPPC4-208ENST00000527680 ASGR1P07306 291 aa26.43■■□□□ 1.82
TRAPPC4-208ENST00000527680 ITGB8P26012 769 aa26.43■■□□□ 1.82
TRAPPC4-208ENST00000527680 IRX5P78411 483 aaPredicted RBP26.43■■□□□ 1.82
TRAPPC4-208ENST00000527680 B4GALNT3Q6L9W6 998 aa26.43■■□□□ 1.82
TRAPPC4-208ENST00000527680 FAM133AQ8N9E0 248 aa26.43■■□□□ 1.82
TRAPPC4-208ENST00000527680 TOX2Q96NM4 488 aa26.43■■□□□ 1.82
TRAPPC4-208ENST00000527680 A0A0D9SFI3 127 aa26.42■■□□□ 1.82
TRAPPC4-208ENST00000527680 TNFAIP2Q03169 654 aa26.42■■□□□ 1.82
TRAPPC4-208ENST00000527680 FAAP100Q0VG06 881 aa26.42■■□□□ 1.82
TRAPPC4-208ENST00000527680 CCSAPQ6IQ19 270 aaPredicted RBP26.42■■□□□ 1.82
TRAPPC4-208ENST00000527680 ANKRD33Q7Z3H0 272 aa26.42■■□□□ 1.82
TRAPPC4-208ENST00000527680 CCPG1Q9ULG6 757 aa26.42■■□□□ 1.82
TRAPPC4-208ENST00000527680 ELP1O95163 1332 aa26.41■■□□□ 1.82
TRAPPC4-208ENST00000527680 ADCY6O43306 1168 aa26.41■■□□□ 1.82
TRAPPC4-208ENST00000527680 HSPD1P10809 573 aaKnown RBP26.41■■□□□ 1.82
TRAPPC4-208ENST00000527680 GJA9P57773 515 aa26.41■■□□□ 1.82
TRAPPC4-208ENST00000527680 NMIQ13287 307 aaPredicted RBP26.41■■□□□ 1.82
TRAPPC4-208ENST00000527680 NSMFQ6X4W1 530 aa26.41■■□□□ 1.82
TRAPPC4-208ENST00000527680 RASGRP2Q7LDG7 609 aa26.41■■□□□ 1.82
TRAPPC4-208ENST00000527680 DCAF4Q8WV16 495 aa26.41■■□□□ 1.82
TRAPPC4-208ENST00000527680 RWDD1Q9H446 243 aaPredicted RBP26.41■■□□□ 1.82
TRAPPC4-208ENST00000527680 SOWAHBA6NEL2 793 aa26.4■■□□□ 1.82
TRAPPC4-208ENST00000527680 FGRP09769 529 aa26.4■■□□□ 1.82
TRAPPC4-208ENST00000527680 CST5P28325 142 aaPredicted RBP26.4■■□□□ 1.82
TRAPPC4-208ENST00000527680 SLC16A2P36021 539 aa26.4■■□□□ 1.82
TRAPPC4-208ENST00000527680 HAND2P61296 217 aa26.4■■□□□ 1.82
TRAPPC4-208ENST00000527680 FPGSQ05932 587 aa26.4■■□□□ 1.82
TRAPPC4-208ENST00000527680 MUM1L1Q5H9M0 696 aa26.4■■□□□ 1.82
TRAPPC4-208ENST00000527680 TTBK2Q6IQ55 1244 aa26.4■■□□□ 1.82
TRAPPC4-208ENST00000527680 MROH7Q68CQ1 1323 aa26.39■■□□□ 1.82
TRAPPC4-208ENST00000527680 TOP1P11387 765 aaKnown RBP26.39■■□□□ 1.82
TRAPPC4-208ENST00000527680 TICAM2Q86XR7 235 aa26.39■■□□□ 1.82
TRAPPC4-208ENST00000527680 RNPC3Q96LT9 517 aaKnown RBP26.39■■□□□ 1.82
TRAPPC4-208ENST00000527680 TMEM47Q9BQJ4 181 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms