RNA–Protein interactions for RNA: ENST00000527537.5

RDX-203, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,403 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-203ENST00000527537 RNF220Q5VTB9 566 aa7.43□□□□□ -1.22
RDX-203ENST00000527537 APBB1IPQ7Z5R6 666 aaPredicted RBP7.43□□□□□ -1.22
RDX-203ENST00000527537 LMNTD2Q8IXW0 634 aa7.43□□□□□ -1.22
RDX-203ENST00000527537 MLKLQ8NB16 471 aa7.43□□□□□ -1.22
RDX-203ENST00000527537 ENOX1Q8TC92 643 aaKnown RBP7.43□□□□□ -1.22
RDX-203ENST00000527537 ARPC5LQ9BPX5 153 aa7.43□□□□□ -1.22
RDX-203ENST00000527537 DMAP1Q9NPF5 467 aaPredicted RBP7.43□□□□□ -1.22
RDX-203ENST00000527537 SLC12A6Q9UHW9 1150 aa7.43□□□□□ -1.22
RDX-203ENST00000527537 LRRC42Q9Y546 428 aa7.43□□□□□ -1.22
RDX-203ENST00000527537 ZMYM6O95789 1325 aa7.43□□□□□ -1.22
RDX-203ENST00000527537 USP42Q9H9J4 1324 aaKnown RBP7.43□□□□□ -1.22
RDX-203ENST00000527537 PTPDC1A2A3K4 754 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 CTDNEP1O95476 244 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 TNFRSF8P28908 595 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 CEBPAP49715 358 aaPredicted RBP7.42□□□□□ -1.22
RDX-203ENST00000527537 GUCY1B3Q02153 619 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 PAK2Q13177 524 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 TMED1Q13445 227 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 SEPT2Q15019 361 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 IFI16Q16666 785 aaKnown RBP7.42□□□□□ -1.22
RDX-203ENST00000527537 MAEAQ7L5Y9 396 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 FOXP4Q8IVH2 680 aaPredicted RBP7.42□□□□□ -1.22
RDX-203ENST00000527537 SSH3Q8TE77 659 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 FGD4Q96M96 766 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 TRAPPC9Q96Q05 1148 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 SLF1Q9BQI6 1058 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.42□□□□□ -1.22
RDX-203ENST00000527537 TMOD4Q9NZQ9 345 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 WDR37Q9Y2I8 494 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 TMEM98Q9Y2Y6 226 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 MROH7-TTC4A0A0A0MT08 1334 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 LGR5O75473 907 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 SURF6O75683 361 aaKnown RBP7.42□□□□□ -1.22
RDX-203ENST00000527537 GYPCP04921 128 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 VIL1P09327 827 aaKnown RBP7.42□□□□□ -1.22
RDX-203ENST00000527537 SP100P23497 879 aaPredicted RBP7.42□□□□□ -1.22
RDX-203ENST00000527537 FXR1P51114 621 aaKnown RBP eCLIP7.42□□□□□ -1.22
RDX-203ENST00000527537 CUL4BQ13620 913 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 LONRF3Q496Y0 759 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 CYP26C1Q6V0L0 522 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 RNF168Q8IYW5 571 aaPredicted RBP7.42□□□□□ -1.22
RDX-203ENST00000527537 SMYD1Q8NB12 490 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 PHC3Q8NDX5 983 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 IFT43Q96FT9 208 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 TAF1DQ9H5J8 278 aaPredicted RBP7.42□□□□□ -1.22
RDX-203ENST00000527537 SNRKQ9NRH2 765 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 SAMSN1Q9NSI8 373 aaKnown RBP7.42□□□□□ -1.22
RDX-203ENST00000527537 HMG20BQ9P0W2 317 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 NRXN3Q9Y4C0 1643 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 SPATA31D1Q6ZQQ2 1576 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 IFIT3O14879 490 aaKnown RBP7.42□□□□□ -1.22
RDX-203ENST00000527537 PAEPP09466 180 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 NQO1P15559 274 aaKnown RBP7.42□□□□□ -1.22
RDX-203ENST00000527537 LTKP29376 864 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 SLC7A5Q01650 507 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 ITIH3Q06033 890 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 APTXQ7Z2E3 356 aaKnown RBP7.42□□□□□ -1.22
RDX-203ENST00000527537 CPLX4Q7Z7G2 160 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 GBP7Q8N8V2 638 aaPredicted RBP7.42□□□□□ -1.22
RDX-203ENST00000527537 DYDC1Q8WWB3 177 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 PRCCQ92733 491 aaPredicted RBP7.42□□□□□ -1.22
RDX-203ENST00000527537 KCNN1Q92952 543 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 FAM227BQ96M60 508 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 HAUS4Q9H6D7 363 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 STIM2Q9P246 746 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 REXO2Q9Y3B8 237 aaKnown RBP7.42□□□□□ -1.22
RDX-203ENST00000527537 PCDHA5Q9Y5H7 936 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 ITSN1Q15811 1721 aa7.42□□□□□ -1.22
RDX-203ENST00000527537 PALM3A6NDB9 673 aaPredicted RBP7.41□□□□□ -1.22
RDX-203ENST00000527537 F8W031 263 aaPredicted RBP7.41□□□□□ -1.22
RDX-203ENST00000527537 BACH1O14867 736 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 ALDH5A1P51649 535 aaPredicted RBP7.41□□□□□ -1.22
RDX-203ENST00000527537 BPIFB4P59827 614 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 KCNJ2P63252 427 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 MYBPC2Q14324 1141 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 OR52E8Q6IFG1 317 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 TMEM154Q6P9G4 183 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 METTL16Q86W50 562 aaKnown RBP7.41□□□□□ -1.22
RDX-203ENST00000527537 RAPGEF5Q92565 580 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 RPS6KC1Q96S38 1066 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 EYA1Q99502 592 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 TUBGCP4Q9UGJ1 667 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 HPSEQ9Y251 543 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 RIMS1Q86UR5 1692 aaKnown RBP7.41□□□□□ -1.22
RDX-203ENST00000527537 FLOT1O75955 427 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 DRD4P21917 467 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 CMPK2Q5EBM0 449 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 FKBP15Q5T1M5 1219 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 CCDC102BQ68D86 513 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 SESTD1Q86VW0 696 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 TRMT44Q8IYL2 757 aaKnown RBP7.41□□□□□ -1.22
RDX-203ENST00000527537 MREGQ8N565 214 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 USHBP1Q8N6Y0 703 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 SMCR8Q8TEV9 937 aaPredicted RBP7.41□□□□□ -1.22
RDX-203ENST00000527537 IWS1Q96ST2 819 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 MON2Q7Z3U7 1717 aa7.41□□□□□ -1.22
RDX-203ENST00000527537 PHF20L1A8MW92 1017 aa7.4□□□□□ -1.22
RDX-203ENST00000527537 F8VZ95 297 aa7.4□□□□□ -1.22
RDX-203ENST00000527537 C3P01024 1663 aa7.4□□□□□ -1.22
RDX-203ENST00000527537 PDHA1P08559 390 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms