RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 BACH2Q9BYV9 841 aa13.13□□□□□ -0.31
CTSB-214ENST00000527243 RNF208Q9H0X6 261 aa13.13□□□□□ -0.31
CTSB-214ENST00000527243 RPTORQ8N122 1335 aa13.13□□□□□ -0.31
CTSB-214ENST00000527243 IFIT3O14879 490 aaKnown RBP13.12□□□□□ -0.31
CTSB-214ENST00000527243 ICAM1P05362 532 aa13.12□□□□□ -0.31
CTSB-214ENST00000527243 PGK2P07205 417 aa13.12□□□□□ -0.31
CTSB-214ENST00000527243 GOLGA8HP0CJ92 632 aa13.12□□□□□ -0.31
CTSB-214ENST00000527243 PRKAR2AP13861 404 aaKnown RBP13.12□□□□□ -0.31
CTSB-214ENST00000527243 TROAPQ12815 778 aa13.12□□□□□ -0.31
CTSB-214ENST00000527243 IKQ13123 557 aaPredicted RBP13.12□□□□□ -0.31
CTSB-214ENST00000527243 SLC35G1Q2M3R5 365 aa13.12□□□□□ -0.31
CTSB-214ENST00000527243 TKFCQ3LXA3 575 aa13.12□□□□□ -0.31
CTSB-214ENST00000527243 CHST3Q7LGC8 479 aa13.12□□□□□ -0.31
CTSB-214ENST00000527243 UBE2Q1Q7Z7E8 422 aa13.12□□□□□ -0.31
CTSB-214ENST00000527243 DPP9Q86TI2 863 aa13.12□□□□□ -0.31
CTSB-214ENST00000527243 U2AF1L4Q8WU68 220 aaKnown RBP13.12□□□□□ -0.31
CTSB-214ENST00000527243 MAML3Q96JK9 1138 aa13.12□□□□□ -0.31
CTSB-214ENST00000527243 CRISPLD2Q9H0B8 497 aa13.12□□□□□ -0.31
CTSB-214ENST00000527243 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.12□□□□□ -0.315e-6■■□□□ 12.5
CTSB-214ENST00000527243 LY9Q9HBG7 655 aa13.12□□□□□ -0.31
CTSB-214ENST00000527243 GPHNQ9NQX3 736 aaPredicted RBP13.12□□□□□ -0.31
CTSB-214ENST00000527243 FBXO40Q9UH90 709 aa13.12□□□□□ -0.31
CTSB-214ENST00000527243 ISY1Q9ULR0 285 aaKnown RBP13.12□□□□□ -0.31
CTSB-214ENST00000527243 DIS3Q9Y2L1 958 aaKnown RBP13.12□□□□□ -0.31
CTSB-214ENST00000527243 MKI67P46013 3256 aaKnown RBP13.12□□□□□ -0.31
CTSB-214ENST00000527243 WDR19Q8NEZ3 1342 aa13.12□□□□□ -0.31
CTSB-214ENST00000527243 PALM3A6NDB9 673 aaPredicted RBP13.11□□□□□ -0.31
CTSB-214ENST00000527243 SH2B2O14492 632 aaPredicted RBP13.11□□□□□ -0.31
CTSB-214ENST00000527243 EPB41L2O43491 1005 aaKnown RBP13.11□□□□□ -0.31
CTSB-214ENST00000527243 PRC1O43663 620 aa13.11□□□□□ -0.31
CTSB-214ENST00000527243 SGPL1O95470 568 aa13.11□□□□□ -0.31
CTSB-214ENST00000527243 HSPA4P34932 840 aa13.11□□□□□ -0.31
CTSB-214ENST00000527243 KCTD2Q14681 263 aa13.11□□□□□ -0.31
CTSB-214ENST00000527243 WTAPQ15007 396 aa13.11□□□□□ -0.31
CTSB-214ENST00000527243 TMEM67Q5HYA8 995 aa13.11□□□□□ -0.31
CTSB-214ENST00000527243 RNF20Q5VTR2 975 aa13.11□□□□□ -0.31
CTSB-214ENST00000527243 STAG2Q8N3U4 1231 aa13.11□□□□□ -0.31
CTSB-214ENST00000527243 TRPV1Q8NER1 839 aa13.11□□□□□ -0.31
CTSB-214ENST00000527243 MTMR8Q96EF0 704 aa13.11□□□□□ -0.31
CTSB-214ENST00000527243 UBA5Q9GZZ9 404 aa13.11□□□□□ -0.31
CTSB-214ENST00000527243 CPVLQ9H3G5 476 aa13.11□□□□□ -0.31
CTSB-214ENST00000527243 RNF146Q9NTX7 359 aa13.11□□□□□ -0.31
CTSB-214ENST00000527243 MAD2L2Q9UI95 211 aa13.11□□□□□ -0.31
CTSB-214ENST00000527243 CTDP1Q9Y5B0 961 aaPredicted RBP13.11□□□□□ -0.31
CTSB-214ENST00000527243 PARP1P09874 1014 aaKnown RBP13.1□□□□□ -0.31
CTSB-214ENST00000527243 CYBAP13498 195 aa13.1□□□□□ -0.31
CTSB-214ENST00000527243 TAL1P17542 331 aaPredicted RBP13.1□□□□□ -0.31
CTSB-214ENST00000527243 CAPN2P17655 700 aa13.1□□□□□ -0.31
CTSB-214ENST00000527243 CCND3P30281 292 aaPredicted RBP13.1□□□□□ -0.31
CTSB-214ENST00000527243 CYP2C19P33261 490 aa13.1□□□□□ -0.31
CTSB-214ENST00000527243 MCM5P33992 734 aa13.1□□□□□ -0.31
CTSB-214ENST00000527243 LIFRP42702 1097 aa13.1□□□□□ -0.31
CTSB-214ENST00000527243 EXOSC10Q01780 885 aaKnown RBP13.1□□□□□ -0.31
CTSB-214ENST00000527243 GRM4Q14833 912 aa13.1□□□□□ -0.31
CTSB-214ENST00000527243 SART3Q15020 963 aaKnown RBP13.1□□□□□ -0.31
CTSB-214ENST00000527243 ADCK5Q3MIX3 580 aa13.1□□□□□ -0.31
CTSB-214ENST00000527243 MUM1L1Q5H9M0 696 aa13.1□□□□□ -0.31
CTSB-214ENST00000527243 MFSD14CQ5VZR4 134 aa13.1□□□□□ -0.31
CTSB-214ENST00000527243 CCDC174Q6PII3 467 aa13.1□□□□□ -0.31
CTSB-214ENST00000527243 FAM133AQ8N9E0 248 aa13.1□□□□□ -0.31
CTSB-214ENST00000527243 TMEM87BQ96K49 555 aa13.1□□□□□ -0.31
CTSB-214ENST00000527243 DEFB118Q96PH6 123 aa13.1□□□□□ -0.31
CTSB-214ENST00000527243 ACAD9Q9H845 621 aa13.1□□□□□ -0.31
CTSB-214ENST00000527243 HMX1Q9NP08 348 aaPredicted RBP13.1□□□□□ -0.31
CTSB-214ENST00000527243 A1CFQ9NQ94 594 aaKnown RBP13.1□□□□□ -0.31
CTSB-214ENST00000527243 SLC5A4Q9NY91 659 aa13.1□□□□□ -0.31
CTSB-214ENST00000527243 REC8O95072 547 aa13.09□□□□□ -0.31
CTSB-214ENST00000527243 ALAS1P13196 640 aa13.09□□□□□ -0.31
CTSB-214ENST00000527243 MLLT1Q03111 559 aaPredicted RBP13.09□□□□□ -0.31
CTSB-214ENST00000527243 LHX8Q68G74 356 aa13.09□□□□□ -0.31
CTSB-214ENST00000527243 MAMDC4Q6UXC1 1216 aa13.09□□□□□ -0.31
CTSB-214ENST00000527243 ZNF467Q7Z7K2 595 aaPredicted RBP13.09□□□□□ -0.31
CTSB-214ENST00000527243 ADGRF4Q8IZF3 695 aa13.09□□□□□ -0.31
CTSB-214ENST00000527243 CLEC4DQ8WXI8 215 aa13.09□□□□□ -0.31
CTSB-214ENST00000527243 TRERF1Q96PN7 1200 aa13.09□□□□□ -0.31
CTSB-214ENST00000527243 NEK1Q96PY6 1258 aa13.09□□□□□ -0.31
CTSB-214ENST00000527243 MAP3K14Q99558 947 aa13.09□□□□□ -0.31
CTSB-214ENST00000527243 JMJD4Q9H9V9 463 aa13.09□□□□□ -0.31
CTSB-214ENST00000527243 HOMER2Q9NSB8 354 aa13.09□□□□□ -0.31
CTSB-214ENST00000527243 NRBP1Q9UHY1 535 aa13.09□□□□□ -0.31
CTSB-214ENST00000527243 OGDHLQ9ULD0 1010 aa13.09□□□□□ -0.31
CTSB-214ENST00000527243 CCPG1Q9ULG6 757 aa13.09□□□□□ -0.31
CTSB-214ENST00000527243 PDE4DIPQ5VU43 2346 aa13.08□□□□□ -0.31
CTSB-214ENST00000527243 SMCHD1A6NHR9 2005 aa13.08□□□□□ -0.31
CTSB-214ENST00000527243 ERICH2A1L162 156 aa13.08□□□□□ -0.32
CTSB-214ENST00000527243 KLRF2D3W0D1 207 aa13.08□□□□□ -0.32
CTSB-214ENST00000527243 MNX1P50219 401 aaPredicted RBP13.08□□□□□ -0.32
CTSB-214ENST00000527243 CNTN2Q02246 1040 aa13.08□□□□□ -0.32
CTSB-214ENST00000527243 SGMS1Q86VZ5 419 aa13.08□□□□□ -0.32
CTSB-214ENST00000527243 ZNF654Q8IZM8 581 aa13.08□□□□□ -0.32
CTSB-214ENST00000527243 MSL3Q8N5Y2 521 aaKnown RBP13.08□□□□□ -0.32
CTSB-214ENST00000527243 DDX11Q96FC9 970 aa13.08□□□□□ -0.32
CTSB-214ENST00000527243 TINF2Q9BSI4 451 aa13.08□□□□□ -0.32
CTSB-214ENST00000527243 USP26Q9BXU7 913 aa13.08□□□□□ -0.32
CTSB-214ENST00000527243 RIOX1Q9H6W3 641 aa13.08□□□□□ -0.32
CTSB-214ENST00000527243 PNMA2Q9UL42 364 aa13.08□□□□□ -0.32
CTSB-214ENST00000527243 SNX14Q9Y5W7 946 aa13.08□□□□□ -0.32
CTSB-214ENST00000527243 ASTN1O14525 1302 aa13.08□□□□□ -0.32
CTSB-214ENST00000527243 ZNFX1Q9P2E3 1918 aaKnown RBP13.07□□□□□ -0.32
CTSB-214ENST00000527243 TNRC18O15417 2968 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms