RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 CTDP1Q9Y5B0 961 aaPredicted RBP22.34■■□□□ 1.17
CAPN1-206ENST00000526966 SPTBN5Q9NRC6 3674 aaKnown RBP22.34■■□□□ 1.17
CAPN1-206ENST00000526966 TTC28Q96AY4 2481 aa22.33■■□□□ 1.17
CAPN1-206ENST00000526966 SLC4A3P48751 1232 aa22.33■■□□□ 1.17
CAPN1-206ENST00000526966 ANKRD35Q8N283 1001 aa22.33■■□□□ 1.17
CAPN1-206ENST00000526966 KATNBL1Q9H079 304 aa22.33■■□□□ 1.17
CAPN1-206ENST00000526966 MROH7Q68CQ1 1323 aa22.32■■□□□ 1.16
CAPN1-206ENST00000526966 APPP05067 770 aa22.32■■□□□ 1.16
CAPN1-206ENST00000526966 FDX1P10109 184 aa22.32■■□□□ 1.16
CAPN1-206ENST00000526966 BMP3P12645 472 aa22.32■■□□□ 1.16
CAPN1-206ENST00000526966 CDK7P50613 346 aa22.32■■□□□ 1.16
CAPN1-206ENST00000526966 GJA9P57773 515 aa22.32■■□□□ 1.16
CAPN1-206ENST00000526966 IRX5P78411 483 aaPredicted RBP22.32■■□□□ 1.16
CAPN1-206ENST00000526966 LRRFIP1Q32MZ4 808 aaKnown RBP22.32■■□□□ 1.16
CAPN1-206ENST00000526966 CCDC144BQ3MJ40 725 aa22.32■■□□□ 1.16
CAPN1-206ENST00000526966 ARMCX2Q7L311 632 aa22.32■■□□□ 1.16
CAPN1-206ENST00000526966 PCSK9Q8NBP7 692 aaKnown RBP22.32■■□□□ 1.16
CAPN1-206ENST00000526966 GLT1D1Q96MS3 346 aa22.32■■□□□ 1.16
CAPN1-206ENST00000526966 TTC41PQ6P2S7 1318 aa22.31■■□□□ 1.16
CAPN1-206ENST00000526966 LCTP09848 1927 aa22.31■■□□□ 1.16
CAPN1-206ENST00000526966 TIMP1P01033 207 aa22.31■■□□□ 1.16
CAPN1-206ENST00000526966 ASGR1P07306 291 aa22.31■■□□□ 1.16
CAPN1-206ENST00000526966 C6orf222P0C671 652 aaPredicted RBP22.31■■□□□ 1.16
CAPN1-206ENST00000526966 NKX3-2P78367 333 aa22.31■■□□□ 1.16
CAPN1-206ENST00000526966 SLFN13Q68D06 897 aa22.31■■□□□ 1.16
CAPN1-206ENST00000526966 SEC62Q99442 399 aaKnown RBP22.31■■□□□ 1.16
CAPN1-206ENST00000526966 NACAP1Q9BZK3 213 aa22.31■■□□□ 1.16
CAPN1-206ENST00000526966 MYO9BQ13459 2157 aa22.31■■□□□ 1.16
CAPN1-206ENST00000526966 TSPY3P0CV98 308 aa22.3■■□□□ 1.16
CAPN1-206ENST00000526966 TSPY8P0CW00 308 aa22.3■■□□□ 1.16
CAPN1-206ENST00000526966 PDE4BQ07343 736 aa22.3■■□□□ 1.16
CAPN1-206ENST00000526966 CCDC144CPQ8IYA2 1237 aa22.3■■□□□ 1.16
CAPN1-206ENST00000526966 FAM133AQ8N9E0 248 aa22.3■■□□□ 1.16
CAPN1-206ENST00000526966 PI4K2BQ8TCG2 481 aa22.3■■□□□ 1.16
CAPN1-206ENST00000526966 GMCL1Q96IK5 515 aa22.3■■□□□ 1.16
CAPN1-206ENST00000526966 SPC25Q9HBM1 224 aa22.3■■□□□ 1.16
CAPN1-206ENST00000526966 ZNF536O15090 1300 aa22.3■■□□□ 1.16
CAPN1-206ENST00000526966 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.29■■□□□ 1.16
CAPN1-206ENST00000526966 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.29■■□□□ 1.16
CAPN1-206ENST00000526966 CTAGE5O15320 804 aa22.29■■□□□ 1.16
CAPN1-206ENST00000526966 FOSL2P15408 326 aa22.29■■□□□ 1.16
CAPN1-206ENST00000526966 STAT2P52630 851 aa22.29■■□□□ 1.16
CAPN1-206ENST00000526966 MFSD5Q6N075 450 aa22.29■■□□□ 1.16
CAPN1-206ENST00000526966 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.29■■□□□ 1.16
CAPN1-206ENST00000526966 ACAD9Q9H845 621 aa22.29■■□□□ 1.16
CAPN1-206ENST00000526966 A0A0U1RQG5 324 aaPredicted RBP22.28■■□□□ 1.16
CAPN1-206ENST00000526966 TMEM232C9JQI7 657 aa22.28■■□□□ 1.16
CAPN1-206ENST00000526966 ARVCFO00192 962 aa22.28■■□□□ 1.16
CAPN1-206ENST00000526966 DNAJB2P25686 324 aa22.28■■□□□ 1.16
CAPN1-206ENST00000526966 TFAP4Q01664 338 aa22.28■■□□□ 1.16
CAPN1-206ENST00000526966 CNTN2Q02246 1040 aa22.28■■□□□ 1.16
CAPN1-206ENST00000526966 PPARAQ07869 468 aa22.28■■□□□ 1.16
CAPN1-206ENST00000526966 ZMYM1Q5SVZ6 1142 aa22.28■■□□□ 1.16
CAPN1-206ENST00000526966 FAM160B2Q86V87 743 aa22.28■■□□□ 1.16
CAPN1-206ENST00000526966 FAM126BQ8IXS8 530 aa22.28■■□□□ 1.16
CAPN1-206ENST00000526966 NAPBQ9H115 298 aa22.28■■□□□ 1.16
CAPN1-206ENST00000526966 A1CFQ9NQ94 594 aaKnown RBP22.28■■□□□ 1.16
CAPN1-206ENST00000526966 HOMER2Q9NSB8 354 aa22.28■■□□□ 1.16
CAPN1-206ENST00000526966 CHD9Q3L8U1 2897 aa22.28■■□□□ 1.16
CAPN1-206ENST00000526966 ERC2O15083 957 aa22.27■■□□□ 1.16
CAPN1-206ENST00000526966 PLA2G6O60733 806 aa22.27■■□□□ 1.16
CAPN1-206ENST00000526966 SLC3A2P08195 630 aaKnown RBP22.27■■□□□ 1.16
CAPN1-206ENST00000526966 GNASQ5JWF2 1037 aa22.27■■□□□ 1.16
CAPN1-206ENST00000526966 CHURC1Q8WUH1 139 aa22.27■■□□□ 1.16
CAPN1-206ENST00000526966 RNF146Q9NTX7 359 aa22.27■■□□□ 1.16
CAPN1-206ENST00000526966 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.27■■□□□ 1.16
CAPN1-206ENST00000526966 FOXP2O15409 715 aa22.26■■□□□ 1.15
CAPN1-206ENST00000526966 PPIGQ13427 754 aaKnown RBP eCLIP22.26■■□□□ 1.152e-6■■■□□ 17.2
CAPN1-206ENST00000526966 TKFCQ3LXA3 575 aa22.26■■□□□ 1.15
CAPN1-206ENST00000526966 RASIP1Q5U651 963 aa22.26■■□□□ 1.15
CAPN1-206ENST00000526966 C16orf59Q7L2K0 433 aa22.26■■□□□ 1.15
CAPN1-206ENST00000526966 STAG1Q8WVM7 1258 aa22.26■■□□□ 1.15
CAPN1-206ENST00000526966 AGBL1Q96MI9 1066 aa22.26■■□□□ 1.15
CAPN1-206ENST00000526966 FSD1Q9BTV5 496 aa22.26■■□□□ 1.15
CAPN1-206ENST00000526966 ASTN1O14525 1302 aa22.26■■□□□ 1.15
CAPN1-206ENST00000526966 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.25■■□□□ 1.15
CAPN1-206ENST00000526966 SOWAHBA6NEL2 793 aa22.25■■□□□ 1.15
CAPN1-206ENST00000526966 SLC1A4P43007 532 aa22.25■■□□□ 1.15
CAPN1-206ENST00000526966 GRIN2CQ14957 1233 aa22.25■■□□□ 1.15
CAPN1-206ENST00000526966 PPP4R3BQ5MIZ7 849 aa22.25■■□□□ 1.15
CAPN1-206ENST00000526966 TMEM240Q5SV17 173 aa22.25■■□□□ 1.15
CAPN1-206ENST00000526966 OTUD7AQ8TE49 926 aaPredicted RBP22.25■■□□□ 1.15
CAPN1-206ENST00000526966 GNEQ9Y223 722 aaKnown RBP22.25■■□□□ 1.15
CAPN1-206ENST00000526966 GBF1Q92538 1859 aa22.25■■□□□ 1.15
CAPN1-206ENST00000526966 CD4P01730 458 aa22.24■■□□□ 1.15
CAPN1-206ENST00000526966 MCCP23508 829 aa22.24■■□□□ 1.15
CAPN1-206ENST00000526966 TNFAIP2Q03169 654 aa22.24■■□□□ 1.15
CAPN1-206ENST00000526966 CCDC174Q6PII3 467 aa22.24■■□□□ 1.15
CAPN1-206ENST00000526966 VTI1AQ96AJ9 217 aa22.24■■□□□ 1.15
CAPN1-206ENST00000526966 ASB14A6NK59 587 aa22.23■■□□□ 1.15
CAPN1-206ENST00000526966 TLR3O15455 904 aaKnown RBP22.23■■□□□ 1.15
CAPN1-206ENST00000526966 CSF2RAP15509 400 aa22.23■■□□□ 1.15
CAPN1-206ENST00000526966 BEX3Q00994 111 aa22.23■■□□□ 1.15
CAPN1-206ENST00000526966 TMEM199Q8N511 208 aa22.23■■□□□ 1.15
CAPN1-206ENST00000526966 SLC43A3Q8NBI5 491 aa22.23■■□□□ 1.15
CAPN1-206ENST00000526966 TIFAQ96CG3 184 aa22.23■■□□□ 1.15
CAPN1-206ENST00000526966 TRERF1Q96PN7 1200 aa22.23■■□□□ 1.15
CAPN1-206ENST00000526966 ZNF576Q9H609 170 aa22.23■■□□□ 1.15
CAPN1-206ENST00000526966 IL17RBQ9NRM6 502 aa22.23■■□□□ 1.15
CAPN1-206ENST00000526966 ISY1Q9ULR0 285 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms