RNA–Protein interactions for RNA: ENST00000526606.1

AMBRA1-205, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 4

Gene AMBRA1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-205ENST00000526606 CCL23P55773 120 aa23.58■■□□□ 1.37
AMBRA1-205ENST00000526606 WNT8AQ9H1J5 351 aa23.58■■□□□ 1.37
AMBRA1-205ENST00000526606 HIPK3Q9H422 1215 aa23.58■■□□□ 1.37
AMBRA1-205ENST00000526606 GOPCQ9HD26 462 aa23.58■■□□□ 1.37
AMBRA1-205ENST00000526606 POU3F3P20264 500 aaPredicted RBP23.57■■□□□ 1.36
AMBRA1-205ENST00000526606 PPP2R2DQ66LE6 453 aa23.57■■□□□ 1.36
AMBRA1-205ENST00000526606 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.57■■□□□ 1.36
AMBRA1-205ENST00000526606 SLF1Q9BQI6 1058 aa23.57■■□□□ 1.36
AMBRA1-205ENST00000526606 NOC4LQ9BVI4 516 aaKnown RBP23.57■■□□□ 1.36
AMBRA1-205ENST00000526606 SPC25Q9HBM1 224 aa23.57■■□□□ 1.36
AMBRA1-205ENST00000526606 ATP8A2Q9NTI2 1148 aa23.57■■□□□ 1.36
AMBRA1-205ENST00000526606 EXOC6BQ9Y2D4 811 aa23.57■■□□□ 1.36
AMBRA1-205ENST00000526606 MTCH2Q9Y6C9 303 aa23.57■■□□□ 1.36
AMBRA1-205ENST00000526606 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.56■■□□□ 1.36
AMBRA1-205ENST00000526606 GOLIM4O00461 696 aa23.56■■□□□ 1.36
AMBRA1-205ENST00000526606 ATP2A1O14983 1001 aa23.56■■□□□ 1.36
AMBRA1-205ENST00000526606 CHGBP05060 677 aa23.56■■□□□ 1.36
AMBRA1-205ENST00000526606 CXCL17Q6UXB2 119 aa23.56■■□□□ 1.36
AMBRA1-205ENST00000526606 ARMCX2Q7L311 632 aa23.56■■□□□ 1.36
AMBRA1-205ENST00000526606 KHSRPQ92945 711 aaKnown RBP eCLIP23.56■■□□□ 1.36
AMBRA1-205ENST00000526606 TRPV6Q9H1D0 765 aa23.56■■□□□ 1.36
AMBRA1-205ENST00000526606 MTIF3Q9H2K0 278 aaKnown RBP23.56■■□□□ 1.36
AMBRA1-205ENST00000526606 PCDHA11Q9Y5I1 949 aa23.56■■□□□ 1.36
AMBRA1-205ENST00000526606 TLL1O43897 1013 aa23.55■■□□□ 1.36
AMBRA1-205ENST00000526606 RAD21O60216 631 aa23.55■■□□□ 1.36
AMBRA1-205ENST00000526606 MBD4O95243 580 aa23.55■■□□□ 1.36
AMBRA1-205ENST00000526606 PTGS1P23219 599 aa23.55■■□□□ 1.36
AMBRA1-205ENST00000526606 IL1RAPL2Q9NP60 686 aa23.55■■□□□ 1.36
AMBRA1-205ENST00000526606 C11orf16Q9NQ32 467 aa23.55■■□□□ 1.36
AMBRA1-205ENST00000526606 SLC4A7Q9Y6M7 1214 aa23.55■■□□□ 1.36
AMBRA1-205ENST00000526606 SLC4A3P48751 1232 aa23.54■■□□□ 1.36
AMBRA1-205ENST00000526606 AAK1Q2M2I8 961 aa23.54■■□□□ 1.36
AMBRA1-205ENST00000526606 KRT40Q6A162 431 aa23.54■■□□□ 1.36
AMBRA1-205ENST00000526606 CCDC144CPQ8IYA2 1237 aa23.54■■□□□ 1.36
AMBRA1-205ENST00000526606 CPXCR1Q8N123 301 aa23.54■■□□□ 1.36
AMBRA1-205ENST00000526606 GREB1LQ9C091 1923 aaPredicted RBP23.53■■□□□ 1.36
AMBRA1-205ENST00000526606 EPOPA6NHQ4 379 aa23.53■■□□□ 1.36
AMBRA1-205ENST00000526606 ITGA7Q13683 1181 aa23.53■■□□□ 1.36
AMBRA1-205ENST00000526606 ZKSCAN2Q63HK3 967 aa23.53■■□□□ 1.36
AMBRA1-205ENST00000526606 CEP85Q6P2H3 762 aa23.53■■□□□ 1.36
AMBRA1-205ENST00000526606 PRPF38AQ8NAV1 312 aaKnown RBP23.53■■□□□ 1.36
AMBRA1-205ENST00000526606 AGBL1Q96MI9 1066 aa23.53■■□□□ 1.36
AMBRA1-205ENST00000526606 DNAJC2Q99543 621 aaKnown RBP23.53■■□□□ 1.36
AMBRA1-205ENST00000526606 RAVER2Q9HCJ3 691 aaKnown RBP23.53■■□□□ 1.36
AMBRA1-205ENST00000526606 GNEQ9Y223 722 aaKnown RBP23.53■■□□□ 1.36
AMBRA1-205ENST00000526606 MUC6Q6W4X9 2439 aa23.53■■□□□ 1.36
AMBRA1-205ENST00000526606 F5H6K3 240 aa23.52■■□□□ 1.36
AMBRA1-205ENST00000526606 B4GALT4O60513 344 aa23.52■■□□□ 1.36
AMBRA1-205ENST00000526606 ADD2P35612 726 aa23.52■■□□□ 1.36
AMBRA1-205ENST00000526606 CNTN2Q02246 1040 aa23.52■■□□□ 1.36
AMBRA1-205ENST00000526606 KLRC3Q07444 240 aa23.52■■□□□ 1.36
AMBRA1-205ENST00000526606 SKIV2LQ15477 1246 aaKnown RBP23.52■■□□□ 1.36
AMBRA1-205ENST00000526606 CTR9Q6PD62 1173 aa23.52■■□□□ 1.36
AMBRA1-205ENST00000526606 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.52■■□□□ 1.36
AMBRA1-205ENST00000526606 SCLYQ96I15 445 aa23.52■■□□□ 1.36
AMBRA1-205ENST00000526606 NDUFB10O96000 172 aa23.51■■□□□ 1.35
AMBRA1-205ENST00000526606 RLBP1P12271 317 aa23.51■■□□□ 1.35
AMBRA1-205ENST00000526606 TTLL4Q14679 1199 aa23.51■■□□□ 1.35
AMBRA1-205ENST00000526606 ANKRD35Q8N283 1001 aa23.51■■□□□ 1.35
AMBRA1-205ENST00000526606 SLC38A10Q9HBR0 1119 aa23.51■■□□□ 1.35
AMBRA1-205ENST00000526606 HCN4Q9Y3Q4 1203 aa23.51■■□□□ 1.35
AMBRA1-205ENST00000526606 ZBED9Q6R2W3 1325 aa23.51■■□□□ 1.35
AMBRA1-205ENST00000526606 ARHGEF15O94989 841 aa23.5■■□□□ 1.35
AMBRA1-205ENST00000526606 ATP2A2P16615 1042 aaKnown RBP23.5■■□□□ 1.35
AMBRA1-205ENST00000526606 TNFAIP2Q03169 654 aa23.5■■□□□ 1.35
AMBRA1-205ENST00000526606 TMEM31Q5JXX7 168 aa23.5■■□□□ 1.35
AMBRA1-205ENST00000526606 TMEM63BQ5T3F8 832 aa23.5■■□□□ 1.35
AMBRA1-205ENST00000526606 ERC1Q8IUD2 1116 aa23.5■■□□□ 1.35
AMBRA1-205ENST00000526606 RHPN1Q8TCX5 695 aa23.5■■□□□ 1.35
AMBRA1-205ENST00000526606 CERS4Q9HA82 394 aa23.5■■□□□ 1.35
AMBRA1-205ENST00000526606 DDX49Q9Y6V7 483 aaKnown RBP23.5■■□□□ 1.35
AMBRA1-205ENST00000526606 ZBED4O75132 1171 aa23.49■■□□□ 1.35
AMBRA1-205ENST00000526606 CABYRO75952 493 aa23.49■■□□□ 1.35
AMBRA1-205ENST00000526606 CA3P07451 260 aa23.49■■□□□ 1.35
AMBRA1-205ENST00000526606 PSMC6P62333 389 aa23.49■■□□□ 1.35
AMBRA1-205ENST00000526606 FSCN1Q16658 493 aaKnown RBP23.49■■□□□ 1.35
AMBRA1-205ENST00000526606 RPUSD2Q8IZ73 545 aaKnown RBP23.49■■□□□ 1.35
AMBRA1-205ENST00000526606 FAM133AQ8N9E0 248 aa23.49■■□□□ 1.35
AMBRA1-205ENST00000526606 NYAP2Q9P242 653 aa23.49■■□□□ 1.35
AMBRA1-205ENST00000526606 SOWAHBA6NEL2 793 aa23.48■■□□□ 1.35
AMBRA1-205ENST00000526606 GPR37L1O60883 481 aa23.48■■□□□ 1.35
AMBRA1-205ENST00000526606 RASA1P20936 1047 aa23.48■■□□□ 1.35
AMBRA1-205ENST00000526606 CHST13Q8NET6 341 aa23.48■■□□□ 1.35
AMBRA1-205ENST00000526606 WDFY4Q6ZS81 3184 aa23.48■■□□□ 1.35
AMBRA1-205ENST00000526606 LRRC37A2A6NM11 1700 aa23.47■■□□□ 1.35
AMBRA1-205ENST00000526606 ZBBXA8MT70 800 aa23.47■■□□□ 1.35
AMBRA1-205ENST00000526606 SMPD1P17405 629 aa23.47■■□□□ 1.35
AMBRA1-205ENST00000526606 TMEM67Q5HYA8 995 aa23.47■■□□□ 1.35
AMBRA1-205ENST00000526606 KIFC2Q96AC6 838 aa23.47■■□□□ 1.35
AMBRA1-205ENST00000526606 CD320Q9NPF0 282 aa23.47■■□□□ 1.35
AMBRA1-205ENST00000526606 PDGFCQ9NRA1 345 aa23.47■■□□□ 1.35
AMBRA1-205ENST00000526606 COG5Q9UP83 839 aa23.47■■□□□ 1.35
AMBRA1-205ENST00000526606 BRWD1Q9NSI6 2320 aa23.47■■□□□ 1.35
AMBRA1-205ENST00000526606 DYNC1LI2O43237 492 aaPredicted RBP23.46■■□□□ 1.35
AMBRA1-205ENST00000526606 SCN5AQ14524 2016 aa23.46■■□□□ 1.35
AMBRA1-205ENST00000526606 NOL8Q76FK4 1167 aaKnown RBP23.46■■□□□ 1.35
AMBRA1-205ENST00000526606 TLK2Q86UE8 772 aa23.46■■□□□ 1.35
AMBRA1-205ENST00000526606 PAG1Q9NWQ8 432 aa23.46■■□□□ 1.35
AMBRA1-205ENST00000526606 FBXO40Q9UH90 709 aa23.46■■□□□ 1.35
AMBRA1-205ENST00000526606 SLC4A4Q9Y6R1 1079 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms