RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 GRIK5Q16478 980 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 FILIP1LQ4L180 1135 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 MUM1L1Q5H9M0 696 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 RASGRP2Q7LDG7 609 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 FAM217BQ9NTX9 383 aaPredicted RBP11.07□□□□□ -0.64
USP35-201ENST00000526425 NUP188Q5SRE5 1749 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 SCG2P13521 617 aa11.06□□□□□ -0.64
USP35-201ENST00000526425 HSP90B2PQ58FF3 399 aa11.06□□□□□ -0.64
USP35-201ENST00000526425 SYMPKQ92797 1274 aaKnown RBP11.06□□□□□ -0.64
USP35-201ENST00000526425 ARPP21Q9UBL0 812 aaPredicted RBP11.06□□□□□ -0.64
USP35-201ENST00000526425 TJP1Q07157 1748 aa11.06□□□□□ -0.64
USP35-201ENST00000526425 TPD52L2O43399 206 aaKnown RBP11.06□□□□□ -0.64
USP35-201ENST00000526425 TNNI2P48788 182 aa11.06□□□□□ -0.64
USP35-201ENST00000526425 TMEM165Q9HC07 324 aa11.06□□□□□ -0.64
USP35-201ENST00000526425 CD209Q9NNX6 404 aa11.06□□□□□ -0.64
USP35-201ENST00000526425 ATP8A2Q9NTI2 1148 aa11.06□□□□□ -0.64
USP35-201ENST00000526425 FHOD1Q9Y613 1164 aa11.06□□□□□ -0.64
USP35-201ENST00000526425 ENGASEQ8NFI3 743 aa11.06□□□□□ -0.64
USP35-201ENST00000526425 TBC1D22AQ8WUA7 517 aa11.06□□□□□ -0.64
USP35-201ENST00000526425 ZBTB10Q96DT7 871 aa11.06□□□□□ -0.64
USP35-201ENST00000526425 MASTLQ96GX5 879 aa11.06□□□□□ -0.64
USP35-201ENST00000526425 CRAMP1Q96RY5 1269 aa11.06□□□□□ -0.64
USP35-201ENST00000526425 RIOK1Q9BRS2 568 aaKnown RBP11.06□□□□□ -0.64
USP35-201ENST00000526425 TRIM6Q9C030 488 aaPredicted RBP11.06□□□□□ -0.64
USP35-201ENST00000526425 PNPLA7Q6ZV29 1317 aa11.06□□□□□ -0.64
USP35-201ENST00000526425 KLRF2D3W0D1 207 aa11.05□□□□□ -0.64
USP35-201ENST00000526425 KIF2AO00139 706 aaPredicted RBP11.05□□□□□ -0.64
USP35-201ENST00000526425 VEGFAP15692 232 aaPredicted RBP11.05□□□□□ -0.64
USP35-201ENST00000526425 TM4SF1P30408 202 aa11.05□□□□□ -0.64
USP35-201ENST00000526425 IQCB1Q15051 598 aa11.05□□□□□ -0.64
USP35-201ENST00000526425 NTRK3Q16288 839 aa11.05□□□□□ -0.64
USP35-201ENST00000526425 CCDC178Q5BJE1 867 aa11.05□□□□□ -0.64
USP35-201ENST00000526425 POTEAQ6S8J7 498 aa11.05□□□□□ -0.64
USP35-201ENST00000526425 SRBD1Q8N5C6 995 aaKnown RBP11.05□□□□□ -0.64
USP35-201ENST00000526425 LRRN4CLQ8ND94 238 aa11.05□□□□□ -0.64
USP35-201ENST00000526425 CTNND2Q9UQB3 1225 aa11.05□□□□□ -0.64
USP35-201ENST00000526425 SALL1Q9NSC2 1324 aa11.05□□□□□ -0.64
USP35-201ENST00000526425 PLCD1P51178 756 aa11.05□□□□□ -0.64
USP35-201ENST00000526425 ADKP55263 362 aaKnown RBP11.05□□□□□ -0.64
USP35-201ENST00000526425 KARSQ15046 597 aaKnown RBP11.05□□□□□ -0.64
USP35-201ENST00000526425 TSR1Q2NL82 804 aaKnown RBP11.05□□□□□ -0.64
USP35-201ENST00000526425 LRRC8AQ8IWT6 810 aa11.05□□□□□ -0.64
USP35-201ENST00000526425 DHX40Q8IX18 779 aaKnown RBP11.05□□□□□ -0.64
USP35-201ENST00000526425 RNF26Q9BY78 433 aaPredicted RBP11.05□□□□□ -0.64
USP35-201ENST00000526425 VPS16Q9H269 839 aa11.05□□□□□ -0.64
USP35-201ENST00000526425 DNAI1Q9UI46 699 aa11.05□□□□□ -0.64
USP35-201ENST00000526425 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.05□□□□□ -0.64
USP35-201ENST00000526425 PARP1P09874 1014 aaKnown RBP11.05□□□□□ -0.64
USP35-201ENST00000526425 CCDC47Q96A33 483 aaKnown RBP11.05□□□□□ -0.64
USP35-201ENST00000526425 N4BP3O15049 544 aa11.04□□□□□ -0.64
USP35-201ENST00000526425 PLCG2P16885 1265 aa11.04□□□□□ -0.64
USP35-201ENST00000526425 GSDMDP57764 484 aa11.04□□□□□ -0.64
USP35-201ENST00000526425 PPARDQ03181 441 aa11.04□□□□□ -0.64
USP35-201ENST00000526425 SLC15A2Q16348 729 aa11.04□□□□□ -0.64
USP35-201ENST00000526425 DEFB132Q7Z7B7 95 aa11.04□□□□□ -0.64
USP35-201ENST00000526425 OTUD6BQ8N6M0 293 aa11.04□□□□□ -0.64
USP35-201ENST00000526425 TBC1D16Q8TBP0 767 aa11.04□□□□□ -0.64
USP35-201ENST00000526425 TMEM232C9JQI7 657 aa11.04□□□□□ -0.64
USP35-201ENST00000526425 CCNT1O60563 726 aaKnown RBP11.04□□□□□ -0.64
USP35-201ENST00000526425 DTHD1Q6ZMT9 781 aa11.04□□□□□ -0.64
USP35-201ENST00000526425 FOXP1Q9H334 677 aaPredicted RBP11.04□□□□□ -0.64
USP35-201ENST00000526425 USP40Q9NVE5 1235 aa11.04□□□□□ -0.64
USP35-201ENST00000526425 TXKP42681 527 aa11.04□□□□□ -0.64
USP35-201ENST00000526425 ACTN3Q08043 901 aaPredicted RBP11.04□□□□□ -0.64
USP35-201ENST00000526425 EARS2Q5JPH6 523 aaKnown RBP11.04□□□□□ -0.64
USP35-201ENST00000526425 NOC3LQ8WTT2 800 aaKnown RBP11.04□□□□□ -0.64
USP35-201ENST00000526425 CNKSR1Q969H4 720 aa11.04□□□□□ -0.64
USP35-201ENST00000526425 SPATS2LQ9NUQ6 558 aaKnown RBP11.04□□□□□ -0.64
USP35-201ENST00000526425 PP2D1A8MPX8 630 aa11.03□□□□□ -0.64
USP35-201ENST00000526425 PPP6R2O75170 966 aa11.03□□□□□ -0.64
USP35-201ENST00000526425 SLURP2P0DP57 97 aa11.03□□□□□ -0.64
USP35-201ENST00000526425 SLC16A2P36021 539 aa11.03□□□□□ -0.64
USP35-201ENST00000526425 TMTC3Q6ZXV5 915 aa11.03□□□□□ -0.64
USP35-201ENST00000526425 FMNL3Q8IVF7 1028 aa11.03□□□□□ -0.64
USP35-201ENST00000526425 SP8Q8IXZ3 490 aa11.03□□□□□ -0.64
USP35-201ENST00000526425 RPUSD2Q8IZ73 545 aaKnown RBP11.03□□□□□ -0.64
USP35-201ENST00000526425 KIF9Q9HAQ2 790 aa11.03□□□□□ -0.64
USP35-201ENST00000526425 SAMSN1Q9NSI8 373 aaKnown RBP11.03□□□□□ -0.64
USP35-201ENST00000526425 TCP11L1Q9NUJ3 509 aa11.03□□□□□ -0.64
USP35-201ENST00000526425 ODF2LQ9ULJ1 636 aa11.03□□□□□ -0.64
USP35-201ENST00000526425 BTAF1O14981 1849 aa11.03□□□□□ -0.64
USP35-201ENST00000526425 KRT18P05783 430 aaKnown RBP11.03□□□□□ -0.64
USP35-201ENST00000526425 CALML3P27482 149 aa11.03□□□□□ -0.64
USP35-201ENST00000526425 ENOX2Q16206 610 aaKnown RBP11.03□□□□□ -0.64
USP35-201ENST00000526425 TADA2BQ86TJ2 420 aa11.03□□□□□ -0.64
USP35-201ENST00000526425 METTL16Q86W50 562 aaKnown RBP11.03□□□□□ -0.64
USP35-201ENST00000526425 BLIDQ8IZY5 108 aa11.03□□□□□ -0.64
USP35-201ENST00000526425 IQUBQ8NA54 791 aa11.03□□□□□ -0.64
USP35-201ENST00000526425 DPF2Q92785 391 aa11.03□□□□□ -0.64
USP35-201ENST00000526425 RRP36Q96EU6 259 aaKnown RBP11.03□□□□□ -0.64
USP35-201ENST00000526425 MAGEC2Q9UBF1 373 aaPredicted RBP11.03□□□□□ -0.64
USP35-201ENST00000526425 GBP2P32456 591 aaPredicted RBP11.03□□□□□ -0.64
USP35-201ENST00000526425 TOB1P50616 345 aaPredicted RBP11.03□□□□□ -0.64
USP35-201ENST00000526425 ZYXQ15942 572 aaKnown RBP11.03□□□□□ -0.64
USP35-201ENST00000526425 NUP88Q99567 741 aaPredicted RBP11.03□□□□□ -0.64
USP35-201ENST00000526425 ARFGAP3Q9NP61 516 aa11.03□□□□□ -0.64
USP35-201ENST00000526425 MAN1B1Q9UKM7 699 aa11.03□□□□□ -0.64
USP35-201ENST00000526425 ATP6V0A2Q9Y487 856 aa11.03□□□□□ -0.64
USP35-201ENST00000526425 GNAQP50148 359 aa11.02□□□□□ -0.64
USP35-201ENST00000526425 ASIC1P78348 528 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms