RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 CCDC174Q6PII3 467 aa7.85□□□□□ -1.15
CD44-221ENST00000526000 ARMCX2Q7L311 632 aa7.85□□□□□ -1.15
CD44-221ENST00000526000 OTOP2Q7RTS6 562 aa7.85□□□□□ -1.15
CD44-221ENST00000526000 ANKRD33Q7Z3H0 272 aa7.85□□□□□ -1.15
CD44-221ENST00000526000 MICALL1Q8N3F8 863 aa7.85□□□□□ -1.15
CD44-221ENST00000526000 CEP95Q96GE4 821 aa7.85□□□□□ -1.15
CD44-221ENST00000526000 FGD4Q96M96 766 aa7.85□□□□□ -1.15
CD44-221ENST00000526000 TOX2Q96NM4 488 aa7.85□□□□□ -1.15
CD44-221ENST00000526000 PBX4Q9BYU1 374 aa7.85□□□□□ -1.15
CD44-221ENST00000526000 LRRCC1Q9C099 1032 aa7.85□□□□□ -1.15
CD44-221ENST00000526000 TRPV6Q9H1D0 765 aa7.85□□□□□ -1.15
CD44-221ENST00000526000 EPB41L4AQ9HCS5 686 aaPredicted RBP7.85□□□□□ -1.15
CD44-221ENST00000526000 CXXC1Q9P0U4 656 aaPredicted RBP7.85□□□□□ -1.15
CD44-221ENST00000526000 TBX21Q9UL17 535 aa7.85□□□□□ -1.15
CD44-221ENST00000526000 DDX19BQ9UMR2 479 aa7.85□□□□□ -1.15
CD44-221ENST00000526000 MYO9BQ13459 2157 aa7.85□□□□□ -1.15
CD44-221ENST00000526000 A0A0U1RQG5 324 aaPredicted RBP7.84□□□□□ -1.15
CD44-221ENST00000526000 SOWAHBA6NEL2 793 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 MOXD2PA6NHM9 499 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 PATL2C9JE40 543 aaKnown RBP7.84□□□□□ -1.15
CD44-221ENST00000526000 RFXAPO00287 272 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 GPAA1O43292 621 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 FGBP02675 491 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 TSPY3P0CV98 308 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 TSPY8P0CW00 308 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 BMP3P12645 472 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 MYOGP15173 224 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 COPB2P35606 906 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 GJA9P57773 515 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 CHMP4BP1P59074 171 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 TNFAIP2Q03169 654 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 CTDSPL2Q05D32 466 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 PPIGQ13427 754 aaKnown RBP eCLIP7.84□□□□□ -1.15
CD44-221ENST00000526000 ADGRE1Q14246 886 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 SBK1Q52WX2 424 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 MAMDC4Q6UXC1 1216 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 KCTD1Q719H9 257 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 IFNL3Q8IZI9 196 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 TMEM199Q8N511 208 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 PCSK9Q8NBP7 692 aaKnown RBP7.84□□□□□ -1.15
CD44-221ENST00000526000 SYMPKQ92797 1274 aaKnown RBP7.84□□□□□ -1.15
CD44-221ENST00000526000 TRERF1Q96PN7 1200 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 GAS2L1Q99501 681 aaPredicted RBP7.84□□□□□ -1.15
CD44-221ENST00000526000 AP5M1Q9H0R1 490 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 ABHD16BQ9H3Z7 469 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 CERS4Q9HA82 394 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 SLC38A10Q9HBR0 1119 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 ECHDC1Q9NTX5 307 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 MTMR4Q9NYA4 1195 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 ARPP21Q9UBL0 812 aaPredicted RBP7.84□□□□□ -1.15
CD44-221ENST00000526000 MSRAQ9UJ68 235 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 FEM1BQ9UK73 627 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 MAST2Q6P0Q8 1798 aa7.84□□□□□ -1.15
CD44-221ENST00000526000 ASTN1O14525 1302 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 ELP1O95163 1332 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 SYNGAP1Q96PV0 1343 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 FOCADQ5VW36 1801 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 IGKV6D-41A0A0C4DH26 115 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 ZBBXA8MT70 800 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 CTAGE5O15320 804 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 TLR3O15455 904 aaKnown RBP7.83□□□□□ -1.16
CD44-221ENST00000526000 NMT2O60551 498 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 TTLL1O95922 423 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 SMPD1P17405 629 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 COL9A1P20849 921 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 MUM1L1Q5H9M0 696 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 TJAP1Q5JTD0 557 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 NSMFQ6X4W1 530 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 KIAA1211Q6ZU35 1233 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 RASGRP2Q7LDG7 609 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 FAM126BQ8IXS8 530 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 KBTBD3Q8NAB2 608 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 CHST13Q8NET6 341 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 OTUD7AQ8TE49 926 aaPredicted RBP7.83□□□□□ -1.16
CD44-221ENST00000526000 APPBP2Q92624 585 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 SCLYQ96I15 445 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 RNF146Q9NTX7 359 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 RCAN3Q9UKA8 241 aa7.83□□□□□ -1.16
CD44-221ENST00000526000 YBX2Q9Y2T7 364 aaKnown RBP7.83□□□□□ -1.16
CD44-221ENST00000526000 ZNFX1Q9P2E3 1918 aaKnown RBP7.83□□□□□ -1.16
CD44-221ENST00000526000 GRIN2DO15399 1336 aa7.82□□□□□ -1.16
CD44-221ENST00000526000 RLFQ13129 1914 aa7.82□□□□□ -1.16
CD44-221ENST00000526000 TNFRSF10AO00220 468 aa7.82□□□□□ -1.16
CD44-221ENST00000526000 CYP2C9P11712 490 aa7.82□□□□□ -1.16
CD44-221ENST00000526000 SLC16A2P36021 539 aa7.82□□□□□ -1.16
CD44-221ENST00000526000 SLC1A4P43007 532 aa7.82□□□□□ -1.16
CD44-221ENST00000526000 ITGA7Q13683 1181 aa7.82□□□□□ -1.16
CD44-221ENST00000526000 SKIV2LQ15477 1246 aaKnown RBP7.82□□□□□ -1.16
CD44-221ENST00000526000 TTBK2Q6IQ55 1244 aa7.82□□□□□ -1.16
CD44-221ENST00000526000 DEFB128Q7Z7B8 93 aa7.82□□□□□ -1.16
CD44-221ENST00000526000 FBXO16Q8IX29 292 aaPredicted RBP7.82□□□□□ -1.16
CD44-221ENST00000526000 MSL3Q8N5Y2 521 aaKnown RBP7.82□□□□□ -1.16
CD44-221ENST00000526000 FAM133AQ8N9E0 248 aa7.82□□□□□ -1.16
CD44-221ENST00000526000 NEDD1Q8NHV4 660 aa7.82□□□□□ -1.16
CD44-221ENST00000526000 CHURC1Q8WUH1 139 aa7.82□□□□□ -1.16
CD44-221ENST00000526000 STAG1Q8WVM7 1258 aa7.82□□□□□ -1.16
CD44-221ENST00000526000 MKL1Q969V6 931 aa7.82□□□□□ -1.16
CD44-221ENST00000526000 YTHDC1Q96MU7 727 aaKnown RBP7.82□□□□□ -1.16
CD44-221ENST00000526000 NECAB3Q96P71 396 aaPredicted RBP7.82□□□□□ -1.16
CD44-221ENST00000526000 KATNBL1Q9H079 304 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms