RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 CTAGE5O15320 804 aa15.02■□□□□ -0
CCDC90B-205ENST00000525916 CD4P01730 458 aa15.02■□□□□ -0
CCDC90B-205ENST00000525916 FGBP02675 491 aa15.02■□□□□ -0
CCDC90B-205ENST00000525916 RABGGTBP53611 331 aa15.02■□□□□ -0
CCDC90B-205ENST00000525916 OTOP2Q7RTS6 562 aa15.02■□□□□ -0
CCDC90B-205ENST00000525916 ZNF467Q7Z7K2 595 aaPredicted RBP15.02■□□□□ -0
CCDC90B-205ENST00000525916 ERC1Q8IUD2 1116 aa15.02■□□□□ -0
CCDC90B-205ENST00000525916 MTIF3Q9H2K0 278 aaKnown RBP15.02■□□□□ -0
CCDC90B-205ENST00000525916 COL4A4P53420 1690 aaPredicted RBP15.02□□□□□ -0.01
CCDC90B-205ENST00000525916 TANC1Q9C0D5 1861 aa15.01□□□□□ -0.01
CCDC90B-205ENST00000525916 CHGBP05060 677 aa15.01□□□□□ -0.01
CCDC90B-205ENST00000525916 RLBP1P12271 317 aa15.01□□□□□ -0.01
CCDC90B-205ENST00000525916 BMP1P13497 986 aa15.01□□□□□ -0.01
CCDC90B-205ENST00000525916 MYOGP15173 224 aa15.01□□□□□ -0.01
CCDC90B-205ENST00000525916 KCNQ1P51787 676 aa15.01□□□□□ -0.01
CCDC90B-205ENST00000525916 BEX3Q00994 111 aa15.01□□□□□ -0.01
CCDC90B-205ENST00000525916 PPP2R2DQ66LE6 453 aa15.01□□□□□ -0.01
CCDC90B-205ENST00000525916 ARMCX2Q7L311 632 aa15.01□□□□□ -0.01
CCDC90B-205ENST00000525916 AMOTL1Q8IY63 956 aa15.01□□□□□ -0.01
CCDC90B-205ENST00000525916 FTSJ3Q8IY81 847 aaKnown RBP15.01□□□□□ -0.01
CCDC90B-205ENST00000525916 CPXCR1Q8N123 301 aa15.01□□□□□ -0.01
CCDC90B-205ENST00000525916 TSPYL2Q9H2G4 693 aaPredicted RBP15.01□□□□□ -0.01
CCDC90B-205ENST00000525916 ABHD16BQ9H3Z7 469 aa15.01□□□□□ -0.01
CCDC90B-205ENST00000525916 HIPK3Q9H422 1215 aa15.01□□□□□ -0.01
CCDC90B-205ENST00000525916 HOXD11P31277 338 aaPredicted RBP15□□□□□ -0.01
CCDC90B-205ENST00000525916 ADD2P35612 726 aa15□□□□□ -0.01
CCDC90B-205ENST00000525916 CCL23P55773 120 aa15□□□□□ -0.01
CCDC90B-205ENST00000525916 RHPN1Q8TCX5 695 aa15□□□□□ -0.01
CCDC90B-205ENST00000525916 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15□□□□□ -0.01
CCDC90B-205ENST00000525916 GNL3Q9BVP2 549 aaKnown RBP eCLIP15□□□□□ -0.01
CCDC90B-205ENST00000525916 C1QTNF1Q9BXJ1 281 aa15□□□□□ -0.01
CCDC90B-205ENST00000525916 KATNBL1Q9H079 304 aa15□□□□□ -0.01
CCDC90B-205ENST00000525916 BCL11AQ9H165 835 aa15□□□□□ -0.01
CCDC90B-205ENST00000525916 TRIP12Q14669 1992 aaPredicted RBP15□□□□□ -0.01
CCDC90B-205ENST00000525916 ASTN1O14525 1302 aa14.99□□□□□ -0.01
CCDC90B-205ENST00000525916 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.99□□□□□ -0.01
CCDC90B-205ENST00000525916 CTR9Q6PD62 1173 aa14.99□□□□□ -0.01
CCDC90B-205ENST00000525916 CXCL17Q6UXB2 119 aa14.99□□□□□ -0.01
CCDC90B-205ENST00000525916 CCDC144CPQ8IYA2 1237 aa14.99□□□□□ -0.01
CCDC90B-205ENST00000525916 ANKRD35Q8N283 1001 aa14.99□□□□□ -0.01
CCDC90B-205ENST00000525916 WNT8AQ9H1J5 351 aa14.99□□□□□ -0.01
CCDC90B-205ENST00000525916 RAVER2Q9HCJ3 691 aaKnown RBP14.99□□□□□ -0.01
CCDC90B-205ENST00000525916 RCAN3Q9UKA8 241 aa14.99□□□□□ -0.01
CCDC90B-205ENST00000525916 TET1Q8NFU7 2136 aa14.99□□□□□ -0.01
CCDC90B-205ENST00000525916 ATP2A1O14983 1001 aa14.98□□□□□ -0.01
CCDC90B-205ENST00000525916 NDUFB10O96000 172 aa14.98□□□□□ -0.01
CCDC90B-205ENST00000525916 PTGS1P23219 599 aa14.98□□□□□ -0.01
CCDC90B-205ENST00000525916 SKIV2LQ15477 1246 aaKnown RBP14.98□□□□□ -0.01
CCDC90B-205ENST00000525916 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.98□□□□□ -0.01
CCDC90B-205ENST00000525916 PRPF38AQ8NAV1 312 aaKnown RBP14.98□□□□□ -0.01
CCDC90B-205ENST00000525916 SLC43A3Q8NBI5 491 aa14.98□□□□□ -0.01
CCDC90B-205ENST00000525916 DDRGK1Q96HY6 314 aa14.98□□□□□ -0.01
CCDC90B-205ENST00000525916 NOC4LQ9BVI4 516 aaKnown RBP14.98□□□□□ -0.01
CCDC90B-205ENST00000525916 PAG1Q9NWQ8 432 aa14.98□□□□□ -0.01
CCDC90B-205ENST00000525916 CTDP1Q9Y5B0 961 aaPredicted RBP14.98□□□□□ -0.01
CCDC90B-205ENST00000525916 SLC4A7Q9Y6M7 1214 aa14.98□□□□□ -0.01
CCDC90B-205ENST00000525916 SLC4A4Q9Y6R1 1079 aa14.98□□□□□ -0.01
CCDC90B-205ENST00000525916 GRIN2DO15399 1336 aa14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 ZBBXA8MT70 800 aa14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 F5H6K3 240 aa14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 RFXAPO00287 272 aa14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 B4GALT4O60513 344 aa14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 ZBED4O75132 1171 aa14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 NKX3-2P78367 333 aa14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 CNTN2Q02246 1040 aa14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 KLRC3Q07444 240 aa14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 ITGA7Q13683 1181 aa14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 AAK1Q2M2I8 961 aa14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 NOL8Q76FK4 1167 aaKnown RBP14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 STK11IPQ8N1F8 1099 aa14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 CLASRPQ8N2M8 674 aaKnown RBP14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 KIFC2Q96AC6 838 aa14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 SCLYQ96I15 445 aa14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 TRPV6Q9H1D0 765 aa14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 BOLA2Q9H3K6 86 aa14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 EPHX3Q9H6B9 360 aa14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 HOMER2Q9NSB8 354 aa14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 PCDHA11Q9Y5I1 949 aa14.97□□□□□ -0.01
CCDC90B-205ENST00000525916 IFIT2P09913 472 aaKnown RBP14.96□□□□□ -0.01
CCDC90B-205ENST00000525916 RASA1P20936 1047 aa14.96□□□□□ -0.01
CCDC90B-205ENST00000525916 TNFAIP2Q03169 654 aa14.96□□□□□ -0.01
CCDC90B-205ENST00000525916 HSP90AB4PQ58FF6 505 aa14.96□□□□□ -0.01
CCDC90B-205ENST00000525916 TLK2Q86UE8 772 aa14.96□□□□□ -0.01
CCDC90B-205ENST00000525916 VWCEQ96DN2 955 aa14.96□□□□□ -0.01
CCDC90B-205ENST00000525916 LRFN3Q9BTN0 628 aa14.96□□□□□ -0.01
CCDC90B-205ENST00000525916 SLC38A10Q9HBR0 1119 aa14.96□□□□□ -0.01
CCDC90B-205ENST00000525916 BRWD1Q9NSI6 2320 aa14.96□□□□□ -0.01
CCDC90B-205ENST00000525916 NYAP2Q9P242 653 aa14.96□□□□□ -0.01
CCDC90B-205ENST00000525916 GNEQ9Y223 722 aaKnown RBP14.96□□□□□ -0.01
CCDC90B-205ENST00000525916 SCN10AQ9Y5Y9 1956 aa14.95□□□□□ -0.02
CCDC90B-205ENST00000525916 ERC2O15083 957 aa14.95□□□□□ -0.02
CCDC90B-205ENST00000525916 ATP2A2P16615 1042 aaKnown RBP14.95□□□□□ -0.02
CCDC90B-205ENST00000525916 PSMC6P62333 389 aa14.95□□□□□ -0.02
CCDC90B-205ENST00000525916 FSCN1Q16658 493 aaKnown RBP14.95□□□□□ -0.02
CCDC90B-205ENST00000525916 KRT40Q6A162 431 aa14.95□□□□□ -0.02
CCDC90B-205ENST00000525916 CHST13Q8NET6 341 aa14.95□□□□□ -0.02
CCDC90B-205ENST00000525916 KIF1BPQ96EK5 621 aa14.95□□□□□ -0.02
CCDC90B-205ENST00000525916 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.95□□□□□ -0.02
CCDC90B-205ENST00000525916 CERS4Q9HA82 394 aa14.95□□□□□ -0.02
CCDC90B-205ENST00000525916 ARPP21Q9UBL0 812 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms