RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 FLRT1Q9NZU1 646 aa15.15■□□□□ 0.02
CTSB-209ENST00000525315 FBXO40Q9UH90 709 aa15.15■□□□□ 0.02
CTSB-209ENST00000525315 BAZ2BQ9UIF8 2168 aaKnown RBP15.14■□□□□ 0.01
CTSB-209ENST00000525315 PRC1O43663 620 aa15.14■□□□□ 0.01
CTSB-209ENST00000525315 PARP1P09874 1014 aaKnown RBP15.14■□□□□ 0.01
CTSB-209ENST00000525315 ZKSCAN1P17029 563 aaPredicted RBP15.14■□□□□ 0.01
CTSB-209ENST00000525315 HSPA4P34932 840 aa15.14■□□□□ 0.01
CTSB-209ENST00000525315 SNAP25P60880 206 aa15.14■□□□□ 0.01
CTSB-209ENST00000525315 EXOSC10Q01780 885 aaKnown RBP15.14■□□□□ 0.01
CTSB-209ENST00000525315 CACNB2Q08289 660 aaPredicted RBP15.14■□□□□ 0.01
CTSB-209ENST00000525315 KCTD2Q14681 263 aa15.14■□□□□ 0.01
CTSB-209ENST00000525315 ZNF792Q3KQV3 632 aa15.14■□□□□ 0.01
CTSB-209ENST00000525315 TMEM67Q5HYA8 995 aa15.14■□□□□ 0.01
CTSB-209ENST00000525315 OLFML2BQ68BL8 750 aa15.14■□□□□ 0.01
CTSB-209ENST00000525315 TMTC2Q8N394 836 aa15.14■□□□□ 0.01
CTSB-209ENST00000525315 TMEM87BQ96K49 555 aa15.14■□□□□ 0.01
CTSB-209ENST00000525315 NEK1Q96PY6 1258 aa15.14■□□□□ 0.01
CTSB-209ENST00000525315 RNF208Q9H0X6 261 aa15.14■□□□□ 0.01
CTSB-209ENST00000525315 UNC93B1Q9H1C4 597 aa15.14■□□□□ 0.01
CTSB-209ENST00000525315 LY9Q9HBG7 655 aa15.14■□□□□ 0.01
CTSB-209ENST00000525315 SLC5A4Q9NY91 659 aa15.14■□□□□ 0.01
CTSB-209ENST00000525315 DIS3Q9Y2L1 958 aaKnown RBP15.14■□□□□ 0.01
CTSB-209ENST00000525315 RPTORQ8N122 1335 aa15.14■□□□□ 0.01
CTSB-209ENST00000525315 DNAJC25-GNG10A0A024R161 153 aa15.13■□□□□ 0.01
CTSB-209ENST00000525315 PALM3A6NDB9 673 aaPredicted RBP15.13■□□□□ 0.01
CTSB-209ENST00000525315 MYCP01106 439 aaPredicted RBP15.13■□□□□ 0.01
CTSB-209ENST00000525315 ICAM1P05362 532 aa15.13■□□□□ 0.01
CTSB-209ENST00000525315 GJB1P08034 283 aa15.13■□□□□ 0.01
CTSB-209ENST00000525315 EN2P19622 333 aaPredicted RBP15.13■□□□□ 0.01
CTSB-209ENST00000525315 SLC4A3P48751 1232 aa15.13■□□□□ 0.01
CTSB-209ENST00000525315 TROAPQ12815 778 aa15.13■□□□□ 0.01
CTSB-209ENST00000525315 KRT32Q14532 448 aa15.13■□□□□ 0.01
CTSB-209ENST00000525315 ADCK5Q3MIX3 580 aa15.13■□□□□ 0.01
CTSB-209ENST00000525315 CCDC174Q6PII3 467 aa15.13■□□□□ 0.01
CTSB-209ENST00000525315 USP26Q9BXU7 913 aa15.13■□□□□ 0.01
CTSB-209ENST00000525315 UBA5Q9GZZ9 404 aa15.13■□□□□ 0.01
CTSB-209ENST00000525315 PAK6Q9NQU5 681 aaPredicted RBP15.13■□□□□ 0.01
CTSB-209ENST00000525315 MAD2L2Q9UI95 211 aa15.13■□□□□ 0.01
CTSB-209ENST00000525315 WDR19Q8NEZ3 1342 aa15.13■□□□□ 0.01
CTSB-209ENST00000525315 SH2B2O14492 632 aaPredicted RBP15.12■□□□□ 0.01
CTSB-209ENST00000525315 PGK2P07205 417 aa15.12■□□□□ 0.01
CTSB-209ENST00000525315 CAPN2P17655 700 aa15.12■□□□□ 0.01
CTSB-209ENST00000525315 LIFRP42702 1097 aa15.12■□□□□ 0.01
CTSB-209ENST00000525315 GJA8P48165 433 aa15.12■□□□□ 0.01
CTSB-209ENST00000525315 GRM4Q14833 912 aa15.12■□□□□ 0.01
CTSB-209ENST00000525315 ADGRF4Q8IZF3 695 aa15.12■□□□□ 0.01
CTSB-209ENST00000525315 STAG2Q8N3U4 1231 aa15.12■□□□□ 0.01
CTSB-209ENST00000525315 MAML3Q96JK9 1138 aa15.12■□□□□ 0.01
CTSB-209ENST00000525315 TRERF1Q96PN7 1200 aa15.12■□□□□ 0.01
CTSB-209ENST00000525315 MAP3K14Q99558 947 aa15.12■□□□□ 0.01
CTSB-209ENST00000525315 HMX1Q9NP08 348 aaPredicted RBP15.12■□□□□ 0.01
CTSB-209ENST00000525315 GPHNQ9NQX3 736 aaPredicted RBP15.12■□□□□ 0.01
CTSB-209ENST00000525315 PNMA2Q9UL42 364 aa15.12■□□□□ 0.01
CTSB-209ENST00000525315 MCM3APO60318 1980 aa15.11■□□□□ 0.01
CTSB-209ENST00000525315 KLRF2D3W0D1 207 aa15.11■□□□□ 0.01
CTSB-209ENST00000525315 SGPL1O95470 568 aa15.11■□□□□ 0.01
CTSB-209ENST00000525315 ALAS1P13196 640 aa15.11■□□□□ 0.01
CTSB-209ENST00000525315 MFSD14CQ5VZR4 134 aa15.11■□□□□ 0.01
CTSB-209ENST00000525315 DHX32Q7L7V1 743 aaKnown RBP15.11■□□□□ 0.01
CTSB-209ENST00000525315 CATIPQ7Z7H3 387 aa15.11■□□□□ 0.01
CTSB-209ENST00000525315 DDX11Q96FC9 970 aa15.11■□□□□ 0.01
CTSB-209ENST00000525315 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.11■□□□□ 0.019e-6■■□□□ 13.2
CTSB-209ENST00000525315 CPVLQ9H3G5 476 aa15.11■□□□□ 0.01
CTSB-209ENST00000525315 ACAD9Q9H845 621 aa15.11■□□□□ 0.01
CTSB-209ENST00000525315 JMJD4Q9H9V9 463 aa15.11■□□□□ 0.01
CTSB-209ENST00000525315 RNF146Q9NTX7 359 aa15.11■□□□□ 0.01
CTSB-209ENST00000525315 CCPG1Q9ULG6 757 aa15.11■□□□□ 0.01
CTSB-209ENST00000525315 SNX14Q9Y5W7 946 aa15.11■□□□□ 0.01
CTSB-209ENST00000525315 LCTP09848 1927 aa15.1■□□□□ 0.01
CTSB-209ENST00000525315 HMGB1P09429 215 aaKnown RBP15.1■□□□□ 0.01
CTSB-209ENST00000525315 PRKAR2AP13861 404 aaKnown RBP15.1■□□□□ 0.01
CTSB-209ENST00000525315 MUM1L1Q5H9M0 696 aa15.1■□□□□ 0.01
CTSB-209ENST00000525315 SGMS1Q86VZ5 419 aa15.1■□□□□ 0.01
CTSB-209ENST00000525315 ANKRD35Q8N283 1001 aa15.1■□□□□ 0.01
CTSB-209ENST00000525315 MTMR8Q96EF0 704 aa15.1■□□□□ 0.01
CTSB-209ENST00000525315 CRISPLD2Q9H0B8 497 aa15.1■□□□□ 0.01
CTSB-209ENST00000525315 RIOX1Q9H6W3 641 aa15.1■□□□□ 0.01
CTSB-209ENST00000525315 HOMER2Q9NSB8 354 aa15.1■□□□□ 0.01
CTSB-209ENST00000525315 TNRC18O15417 2968 aaPredicted RBP15.09■□□□□ 0.01
CTSB-209ENST00000525315 DDAH1O94760 285 aa15.09■□□□□ 0.01
CTSB-209ENST00000525315 CCND3P30281 292 aaPredicted RBP15.09■□□□□ 0.01
CTSB-209ENST00000525315 CYP2C19P33261 490 aa15.09■□□□□ 0.01
CTSB-209ENST00000525315 MAMDC4Q6UXC1 1216 aa15.09■□□□□ 0.01
CTSB-209ENST00000525315 ZNF467Q7Z7K2 595 aaPredicted RBP15.09■□□□□ 0.01
CTSB-209ENST00000525315 ZNF654Q8IZM8 581 aa15.09■□□□□ 0.01
CTSB-209ENST00000525315 MSL3Q8N5Y2 521 aaKnown RBP15.09■□□□□ 0.01
CTSB-209ENST00000525315 U2AF1L4Q8WU68 220 aaKnown RBP15.09■□□□□ 0.01
CTSB-209ENST00000525315 TINF2Q9BSI4 451 aa15.09■□□□□ 0.01
CTSB-209ENST00000525315 LRRC2Q9BYS8 371 aa15.09■□□□□ 0.01
CTSB-209ENST00000525315 VAT1LQ9HCJ6 419 aa15.09■□□□□ 0.01
CTSB-209ENST00000525315 A1CFQ9NQ94 594 aaKnown RBP15.09■□□□□ 0.01
CTSB-209ENST00000525315 FRMPD3Q5JV73 1810 aa15.08■□□□□ 0.01
CTSB-209ENST00000525315 CCDC69A6NI79 296 aa15.08■□□□□ 0
CTSB-209ENST00000525315 SMARCA1P28370 1054 aa15.08■□□□□ 0
CTSB-209ENST00000525315 CDC37Q16543 378 aaPredicted RBP15.08■□□□□ 0
CTSB-209ENST00000525315 SLC35G1Q2M3R5 365 aa15.08■□□□□ 0
CTSB-209ENST00000525315 FAM133AQ8N9E0 248 aa15.08■□□□□ 0
CTSB-209ENST00000525315 TRPV1Q8NER1 839 aa15.08■□□□□ 0
CTSB-209ENST00000525315 CLEC4DQ8WXI8 215 aa15.08■□□□□ 0
CTSB-209ENST00000525315 SHISA4Q96DD7 197 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms