RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 CHKAP35790 457 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 CAP2P40123 477 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 PEX19P40855 299 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 NRLP54845 237 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 PSMC1P62191 440 aaKnown RBP5.28□□□□□ -1.56
CD44-213ENST00000525209 KRT83P78385 493 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 TRIM61Q5EBN2 209 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 TLDC1Q6P9B6 456 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 VHLLQ6RSH7 139 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 UBE2Q1Q7Z7E8 422 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 CATIPQ7Z7H3 387 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 C11orf74Q86VG3 221 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 SCUBE1Q8IWY4 988 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 NBPF15Q8N660 670 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 ZNF713Q8N859 430 aaPredicted RBP5.28□□□□□ -1.56
CD44-213ENST00000525209 LSMEM1Q8N8F7 131 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 IRF7Q92985 503 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 TRIM63Q969Q1 353 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 L3MBTL2Q969R5 705 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 HVCN1Q96D96 273 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 WDR12Q9GZL7 423 aaKnown RBP5.28□□□□□ -1.56
CD44-213ENST00000525209 UNC45AQ9H3U1 944 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 TRIM39Q9HCM9 518 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 ARHGEF4Q9NR80 690 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 DZANK1Q9NVP4 752 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 DNM3Q9UQ16 869 aa5.28□□□□□ -1.56
CD44-213ENST00000525209 MAGED1Q9Y5V3 778 aaPredicted RBP5.28□□□□□ -1.56
CD44-213ENST00000525209 FIGNL2A6NMB9 653 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 CHL1O00533 1208 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 NCAM2O15394 837 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 KPNA6O60684 536 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 PPFIA3O75145 1194 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 GFPT2O94808 682 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 CD4P01730 458 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 RAC2P15153 192 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 VCAM1P19320 739 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 GUCY2CP25092 1073 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 HOXD12P35452 270 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 IARSP41252 1262 aaKnown RBP5.27□□□□□ -1.57
CD44-213ENST00000525209 PLA2G4AP47712 749 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 INSM1Q01101 510 aaPredicted RBP5.27□□□□□ -1.57
CD44-213ENST00000525209 PPFIA1Q13136 1202 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 PCBP2Q15366 365 aaKnown RBP eCLIP5.27□□□□□ -1.57
CD44-213ENST00000525209 B3GNT9Q6UX72 402 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 DTHD1Q6ZMT9 781 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 SPOCD1Q6ZMY3 1216 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 LRRC69Q6ZNQ3 347 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 C4orf50Q6ZRC1 276 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 FASTKD5Q7L8L6 764 aaKnown RBP5.27□□□□□ -1.57
CD44-213ENST00000525209 LCA5Q86VQ0 697 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 CMTR2Q8IYT2 770 aaKnown RBP5.27□□□□□ -1.57
CD44-213ENST00000525209 ZNF295-AS1Q8N0V1 137 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 CEP120Q8N960 986 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 C1orf127Q8N9H9 656 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 KCT2Q8NC54 265 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 APPL2Q8NEU8 664 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 NSUN6Q8TEA1 469 aaKnown RBP5.27□□□□□ -1.57
CD44-213ENST00000525209 HSPBAP1Q96EW2 488 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 XAGE2Q96GT9 111 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 CCDC138Q96M89 665 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 TM9SF2Q99805 663 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 MYLK2Q9H1R3 596 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 EFCC1Q9HA90 598 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 ATP6V0A4Q9HBG4 840 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 ABCB6Q9NP58 842 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 PDLIM7Q9NR12 457 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 TMPRSS4Q9NRS4 437 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 ANKEF1Q9NU02 776 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 NKIRAS2Q9NYR9 191 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 TNPO3Q9Y5L0 923 aaKnown RBP5.27□□□□□ -1.57
CD44-213ENST00000525209 SLC12A7Q9Y666 1083 aa5.27□□□□□ -1.57
CD44-213ENST00000525209 SOS2Q07890 1332 aaPredicted RBP5.26□□□□□ -1.57
CD44-213ENST00000525209 TRAV20A0A0B4J274 112 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 SMTNL1A8MU46 457 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 C19orf81C9J6K1 198 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 UBAP1LF5GYI3 381 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 TGFBR3LH3BV60 316 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 EYA2O00167 538 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 ENC1O14682 589 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 AREL1O15033 823 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 ATE1O95260 518 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 MT-CO1P00395 513 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 CPP00450 1065 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 ASLP04424 464 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 HSPA6P17066 643 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 ZNF131P52739 623 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 ERVK-21P61565 698 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 KRT85P78386 507 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 BTKQ06187 659 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 ZNF460Q14592 562 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 TRIP4Q15650 581 aaPredicted RBP5.26□□□□□ -1.57
CD44-213ENST00000525209 NBPF9Q3BBW0 867 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 DNAJC21Q5F1R6 531 aaKnown RBP5.26□□□□□ -1.57
CD44-213ENST00000525209 YOD1Q5VVQ6 348 aaPredicted RBP5.26□□□□□ -1.57
CD44-213ENST00000525209 CYP26C1Q6V0L0 522 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 CCDC129Q6ZRS4 1044 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 CYP2U1Q7Z449 544 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 SRGAP1Q7Z6B7 1085 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 ANKRD18AQ8IVF6 992 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 BRSK2Q8IWQ3 736 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms