RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 MSL3Q8N5Y2 521 aaKnown RBP13.15□□□□□ -0.3
TRAPPC4-204ENST00000524797 AGBL1Q96MI9 1066 aa13.15□□□□□ -0.3
TRAPPC4-204ENST00000524797 FRMPD2Q68DX3 1309 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC4-204ENST00000524797 BRCA2P51587 3418 aa13.14□□□□□ -0.31
TRAPPC4-204ENST00000524797 SLC34A2O95436 690 aa13.14□□□□□ -0.31
TRAPPC4-204ENST00000524797 TAL1P17542 331 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC4-204ENST00000524797 SYDE2Q5VT97 1194 aa13.14□□□□□ -0.31
TRAPPC4-204ENST00000524797 ANO1Q5XXA6 986 aa13.14□□□□□ -0.31
TRAPPC4-204ENST00000524797 RUFY2Q8WXA3 655 aa13.14□□□□□ -0.31
TRAPPC4-204ENST00000524797 FGD4Q96M96 766 aa13.14□□□□□ -0.31
TRAPPC4-204ENST00000524797 ZKSCAN3Q9BRR0 538 aa13.14□□□□□ -0.31
TRAPPC4-204ENST00000524797 ACAD9Q9H845 621 aa13.14□□□□□ -0.31
TRAPPC4-204ENST00000524797 GPCPD1Q9NPB8 672 aa13.14□□□□□ -0.31
TRAPPC4-204ENST00000524797 HOMER2Q9NSB8 354 aa13.14□□□□□ -0.31
TRAPPC4-204ENST00000524797 RNF146Q9NTX7 359 aa13.14□□□□□ -0.31
TRAPPC4-204ENST00000524797 MYH6P13533 1939 aa13.14□□□□□ -0.31
TRAPPC4-204ENST00000524797 SYNGAP1Q96PV0 1343 aa13.14□□□□□ -0.31
TRAPPC4-204ENST00000524797 B4E1Z4 1266 aa13.13□□□□□ -0.31
TRAPPC4-204ENST00000524797 DNM1LO00429 736 aa13.13□□□□□ -0.31
TRAPPC4-204ENST00000524797 KDM4AO75164 1064 aa13.13□□□□□ -0.31
TRAPPC4-204ENST00000524797 ZNF865P0CJ78 1059 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC4-204ENST00000524797 PDHBP11177 359 aa13.13□□□□□ -0.31
TRAPPC4-204ENST00000524797 SLC16A2P36021 539 aa13.13□□□□□ -0.31
TRAPPC4-204ENST00000524797 CCDC178Q5BJE1 867 aa13.13□□□□□ -0.31
TRAPPC4-204ENST00000524797 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
TRAPPC4-204ENST00000524797 ZNF467Q7Z7K2 595 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC4-204ENST00000524797 ANKRD35Q8N283 1001 aa13.13□□□□□ -0.31
TRAPPC4-204ENST00000524797 RANBP17Q9H2T7 1088 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-204ENST00000524797 ALAS1P13196 640 aa13.13□□□□□ -0.31
TRAPPC4-204ENST00000524797 LRRC26Q2I0M4 334 aa13.13□□□□□ -0.31
TRAPPC4-204ENST00000524797 GJC2Q5T442 439 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC4-204ENST00000524797 MAMDC4Q6UXC1 1216 aa13.13□□□□□ -0.31
TRAPPC4-204ENST00000524797 DGKHQ86XP1 1220 aa13.13□□□□□ -0.31
TRAPPC4-204ENST00000524797 ARRDC4Q8NCT1 418 aa13.13□□□□□ -0.31
TRAPPC4-204ENST00000524797 ANKS1AQ92625 1134 aa13.13□□□□□ -0.31
TRAPPC4-204ENST00000524797 TRERF1Q96PN7 1200 aa13.13□□□□□ -0.31
TRAPPC4-204ENST00000524797 SNAI1O95863 264 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-204ENST00000524797 SNHG28P0DPA3 235 aa13.12□□□□□ -0.31
TRAPPC4-204ENST00000524797 PTH1RQ03431 593 aa13.12□□□□□ -0.31
TRAPPC4-204ENST00000524797 ZNF543Q08ER8 600 aa13.12□□□□□ -0.31
TRAPPC4-204ENST00000524797 KRT23Q9C075 422 aa13.12□□□□□ -0.31
TRAPPC4-204ENST00000524797 A1CFQ9NQ94 594 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-204ENST00000524797 CCPG1Q9ULG6 757 aa13.12□□□□□ -0.31
TRAPPC4-204ENST00000524797 ICAM1P05362 532 aa13.11□□□□□ -0.31
TRAPPC4-204ENST00000524797 MUM1L1Q5H9M0 696 aa13.11□□□□□ -0.31
TRAPPC4-204ENST00000524797 IQCA1Q86XH1 822 aa13.11□□□□□ -0.31
TRAPPC4-204ENST00000524797 FAM133AQ8N9E0 248 aa13.11□□□□□ -0.31
TRAPPC4-204ENST00000524797 ZSCAN10Q96SZ4 725 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC4-204ENST00000524797 SENP6Q9GZR1 1112 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC4-204ENST00000524797 PRO3102Q9H379 93 aa13.11□□□□□ -0.31
TRAPPC4-204ENST00000524797 CNNM2Q9H8M5 875 aa13.11□□□□□ -0.31
TRAPPC4-204ENST00000524797 ZMYND8Q9ULU4 1186 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC4-204ENST00000524797 CNPY2Q9Y2B0 182 aa13.11□□□□□ -0.31
TRAPPC4-204ENST00000524797 KBTBD13C9JR72 458 aa13.11□□□□□ -0.31
TRAPPC4-204ENST00000524797 POTEB2H3BUK9 544 aa13.11□□□□□ -0.31
TRAPPC4-204ENST00000524797 SGSM2O43147 1006 aa13.11□□□□□ -0.31
TRAPPC4-204ENST00000524797 RARBP10826 455 aa13.11□□□□□ -0.31
TRAPPC4-204ENST00000524797 AKR1A1P14550 325 aa13.11□□□□□ -0.31
TRAPPC4-204ENST00000524797 CNTN2Q02246 1040 aa13.11□□□□□ -0.31
TRAPPC4-204ENST00000524797 LRRC41Q15345 812 aa13.11□□□□□ -0.31
TRAPPC4-204ENST00000524797 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC4-204ENST00000524797 ZSWIM5Q9P217 1185 aa13.11□□□□□ -0.31
TRAPPC4-204ENST00000524797 MKI67P46013 3256 aaKnown RBP13.1□□□□□ -0.31
TRAPPC4-204ENST00000524797 SOWAHBA6NEL2 793 aa13.1□□□□□ -0.31
TRAPPC4-204ENST00000524797 ENAHQ8N8S7 591 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC4-204ENST00000524797 PNMA1Q8ND90 353 aa13.1□□□□□ -0.31
TRAPPC4-204ENST00000524797 KAT14Q9H8E8 782 aa13.1□□□□□ -0.31
TRAPPC4-204ENST00000524797 XPNPEP3Q9NQH7 507 aa13.1□□□□□ -0.31
TRAPPC4-204ENST00000524797 RBM27Q9P2N5 1060 aaKnown RBP13.1□□□□□ -0.31
TRAPPC4-204ENST00000524797 ZHX1Q9UKY1 873 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC4-204ENST00000524797 U3KPZ7 1027 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC4-204ENST00000524797 TNKSO95271 1327 aa13.1□□□□□ -0.31
TRAPPC4-204ENST00000524797 LTBP2Q14767 1821 aa13.1□□□□□ -0.31
TRAPPC4-204ENST00000524797 GPATCH4Q5T3I0 446 aaKnown RBP13.09□□□□□ -0.31
TRAPPC4-204ENST00000524797 CYB5R4Q7L1T6 521 aa13.09□□□□□ -0.31
TRAPPC4-204ENST00000524797 CENPQQ7L2Z9 268 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC4-204ENST00000524797 ARMCX2Q7L311 632 aa13.09□□□□□ -0.31
TRAPPC4-204ENST00000524797 LENG1Q96BZ8 264 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC4-204ENST00000524797 FAM184BQ9ULE4 1060 aa13.09□□□□□ -0.31
TRAPPC4-204ENST00000524797 MYCNP04198 464 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC4-204ENST00000524797 GOLGA8HP0CJ92 632 aa13.09□□□□□ -0.31
TRAPPC4-204ENST00000524797 SYN1P17600 705 aa13.09□□□□□ -0.31
TRAPPC4-204ENST00000524797 ACVR2BQ13705 512 aa13.09□□□□□ -0.31
TRAPPC4-204ENST00000524797 KATNBL1Q9H079 304 aa13.09□□□□□ -0.31
TRAPPC4-204ENST00000524797 CYP39A1Q9NYL5 469 aa13.09□□□□□ -0.31
TRAPPC4-204ENST00000524797 PHF24Q9UPV7 400 aa13.09□□□□□ -0.31
TRAPPC4-204ENST00000524797 TRIOBPQ9H2D6 2365 aa13.08□□□□□ -0.32
TRAPPC4-204ENST00000524797 PGK1P00558 417 aa13.08□□□□□ -0.32
TRAPPC4-204ENST00000524797 CYP21A2P08686 494 aa13.08□□□□□ -0.32
TRAPPC4-204ENST00000524797 ADCYAP1R1P41586 468 aa13.08□□□□□ -0.32
TRAPPC4-204ENST00000524797 ATN1P54259 1190 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC4-204ENST00000524797 RTP1P59025 263 aa13.08□□□□□ -0.32
TRAPPC4-204ENST00000524797 SEC23AQ15436 765 aa13.08□□□□□ -0.32
TRAPPC4-204ENST00000524797 NSMFQ6X4W1 530 aa13.08□□□□□ -0.32
TRAPPC4-204ENST00000524797 CCDC144CPQ8IYA2 1237 aa13.08□□□□□ -0.32
TRAPPC4-204ENST00000524797 UBAC1Q9BSL1 405 aa13.08□□□□□ -0.32
TRAPPC4-204ENST00000524797 CPVLQ9H3G5 476 aa13.08□□□□□ -0.32
TRAPPC4-204ENST00000524797 ABHD16BQ9H3Z7 469 aa13.08□□□□□ -0.32
TRAPPC4-204ENST00000524797 PNMA2Q9UL42 364 aa13.08□□□□□ -0.32
TRAPPC4-204ENST00000524797 ASTN1O14525 1302 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms