RNA–Protein interactions for RNA: ENST00000524554.5

CAPN11-202, Transcript of calpain 11, humanhuman

TSL 2

Gene CAPN11, Length 1,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-202ENST00000524554 CDK5RAP2Q96SN8 1893 aa11.47□□□□□ -0.57
CAPN11-202ENST00000524554 ZMYM6O95789 1325 aa11.46□□□□□ -0.57
CAPN11-202ENST00000524554 MINDY4BA8MYZ0 360 aa11.46□□□□□ -0.57
CAPN11-202ENST00000524554 PATL2C9JE40 543 aaKnown RBP11.46□□□□□ -0.57
CAPN11-202ENST00000524554 E7EWF7 191 aa11.46□□□□□ -0.57
CAPN11-202ENST00000524554 F5H6K3 240 aa11.46□□□□□ -0.57
CAPN11-202ENST00000524554 FGAP02671 866 aa11.46□□□□□ -0.57
CAPN11-202ENST00000524554 APPP05067 770 aa11.46□□□□□ -0.57
CAPN11-202ENST00000524554 CPA1P15085 419 aa11.46□□□□□ -0.57
CAPN11-202ENST00000524554 ADCYAP1R1P41586 468 aa11.46□□□□□ -0.57
CAPN11-202ENST00000524554 KLRC3Q07444 240 aa11.46□□□□□ -0.57
CAPN11-202ENST00000524554 TRDNQ13061 729 aa11.46□□□□□ -0.57
CAPN11-202ENST00000524554 LRRC41Q15345 812 aa11.46□□□□□ -0.57
CAPN11-202ENST00000524554 SLC17A8Q8NDX2 589 aa11.46□□□□□ -0.57
CAPN11-202ENST00000524554 NACAP1Q9BZK3 213 aa11.46□□□□□ -0.57
CAPN11-202ENST00000524554 EPB41L4AQ9HCS5 686 aaPredicted RBP11.46□□□□□ -0.57
CAPN11-202ENST00000524554 SLC5A4Q9NY91 659 aa11.46□□□□□ -0.57
CAPN11-202ENST00000524554 NYAP2Q9P242 653 aa11.46□□□□□ -0.57
CAPN11-202ENST00000524554 ARPP21Q9UBL0 812 aaPredicted RBP11.46□□□□□ -0.57
CAPN11-202ENST00000524554 CLIP2Q9UDT6 1046 aa11.46□□□□□ -0.57
CAPN11-202ENST00000524554 RIPK3Q9Y572 518 aa11.46□□□□□ -0.57
CAPN11-202ENST00000524554 LAMA4Q16363 1823 aa11.46□□□□□ -0.57
CAPN11-202ENST00000524554 FOCADQ5VW36 1801 aa11.46□□□□□ -0.57
CAPN11-202ENST00000524554 COL6A3P12111 3177 aa11.46□□□□□ -0.58
CAPN11-202ENST00000524554 IGKV6D-41A0A0C4DH26 115 aa11.45□□□□□ -0.58
CAPN11-202ENST00000524554 POTEB2H3BUK9 544 aa11.45□□□□□ -0.58
CAPN11-202ENST00000524554 RAD21O60216 631 aa11.45□□□□□ -0.58
CAPN11-202ENST00000524554 GSE1Q14687 1217 aa11.45□□□□□ -0.58
CAPN11-202ENST00000524554 SKOR2Q2VWA4 1001 aaPredicted RBP11.45□□□□□ -0.58
CAPN11-202ENST00000524554 FAM47AQ5JRC9 791 aa11.45□□□□□ -0.58
CAPN11-202ENST00000524554 RALYLQ86SE5 291 aaKnown RBP11.45□□□□□ -0.58
CAPN11-202ENST00000524554 NCOA7Q8NI08 942 aa11.45□□□□□ -0.58
CAPN11-202ENST00000524554 FERMT2Q96AC1 680 aa11.45□□□□□ -0.58
CAPN11-202ENST00000524554 MMP19Q99542 508 aa11.45□□□□□ -0.58
CAPN11-202ENST00000524554 TINF2Q9BSI4 451 aa11.45□□□□□ -0.58
CAPN11-202ENST00000524554 MKNK2Q9HBH9 465 aa11.45□□□□□ -0.58
CAPN11-202ENST00000524554 GOPCQ9HD26 462 aa11.45□□□□□ -0.58
CAPN11-202ENST00000524554 DIS3Q9Y2L1 958 aaKnown RBP11.45□□□□□ -0.58
CAPN11-202ENST00000524554 DNAH12Q6ZR08 3092 aa11.45□□□□□ -0.58
CAPN11-202ENST00000524554 NDUFB10O96000 172 aa11.45□□□□□ -0.58
CAPN11-202ENST00000524554 MYCNP04198 464 aaPredicted RBP11.45□□□□□ -0.58
CAPN11-202ENST00000524554 ZNF865P0CJ78 1059 aaPredicted RBP11.45□□□□□ -0.58
CAPN11-202ENST00000524554 Q6ZUG5 572 aa11.45□□□□□ -0.58
CAPN11-202ENST00000524554 SH3RF1Q7Z6J0 888 aa11.45□□□□□ -0.58
CAPN11-202ENST00000524554 FBXL16Q8N461 479 aa11.45□□□□□ -0.58
CAPN11-202ENST00000524554 MKL1Q969V6 931 aa11.45□□□□□ -0.58
CAPN11-202ENST00000524554 NAPBQ9H115 298 aa11.45□□□□□ -0.58
CAPN11-202ENST00000524554 ATP11BQ9Y2G3 1177 aa11.45□□□□□ -0.58
CAPN11-202ENST00000524554 MYH1P12882 1939 aa11.44□□□□□ -0.58
CAPN11-202ENST00000524554 WDR19Q8NEZ3 1342 aa11.44□□□□□ -0.58
CAPN11-202ENST00000524554 TRIM43BA6NCK2 446 aa11.44□□□□□ -0.58
CAPN11-202ENST00000524554 PRDM1O75626 825 aa11.44□□□□□ -0.58
CAPN11-202ENST00000524554 SNAI1O95863 264 aaPredicted RBP11.44□□□□□ -0.58
CAPN11-202ENST00000524554 PGK1P00558 417 aa11.44□□□□□ -0.58
CAPN11-202ENST00000524554 PDCP20941 246 aa11.44□□□□□ -0.58
CAPN11-202ENST00000524554 MCM5P33992 734 aa11.44□□□□□ -0.58
CAPN11-202ENST00000524554 KCTD2Q14681 263 aa11.44□□□□□ -0.58
CAPN11-202ENST00000524554 SNX17Q15036 470 aa11.44□□□□□ -0.58
CAPN11-202ENST00000524554 ME3Q16798 604 aa11.44□□□□□ -0.58
CAPN11-202ENST00000524554 TRIM60Q495X7 471 aa11.44□□□□□ -0.58
CAPN11-202ENST00000524554 CCDC83Q8IWF9 413 aa11.44□□□□□ -0.58
CAPN11-202ENST00000524554 IFNL3Q8IZI9 196 aa11.44□□□□□ -0.58
CAPN11-202ENST00000524554 PRPF38AQ8NAV1 312 aaKnown RBP11.44□□□□□ -0.58
CAPN11-202ENST00000524554 TRIM43Q96BQ3 446 aaPredicted RBP11.44□□□□□ -0.58
CAPN11-202ENST00000524554 LBHD1Q9BQE6 289 aaPredicted RBP11.44□□□□□ -0.58
CAPN11-202ENST00000524554 MTMR4Q9NYA4 1195 aa11.44□□□□□ -0.58
CAPN11-202ENST00000524554 NRBP1Q9UHY1 535 aa11.44□□□□□ -0.58
CAPN11-202ENST00000524554 TPCN1Q9ULQ1 816 aa11.44□□□□□ -0.58
CAPN11-202ENST00000524554 DNAJC25-GNG10A0A024R161 153 aa11.43□□□□□ -0.58
CAPN11-202ENST00000524554 KBTBD13C9JR72 458 aa11.43□□□□□ -0.58
CAPN11-202ENST00000524554 ITGB8P26012 769 aa11.43□□□□□ -0.58
CAPN11-202ENST00000524554 EXOSC10Q01780 885 aaKnown RBP11.43□□□□□ -0.58
CAPN11-202ENST00000524554 TOB2Q14106 344 aaPredicted RBP11.43□□□□□ -0.58
CAPN11-202ENST00000524554 SHHQ15465 462 aa11.43□□□□□ -0.58
CAPN11-202ENST00000524554 C1orf53Q5VUE5 145 aa11.43□□□□□ -0.58
CAPN11-202ENST00000524554 STOX1Q6ZVD7 989 aa11.43□□□□□ -0.58
CAPN11-202ENST00000524554 ZNF444Q8N0Y2 327 aaPredicted RBP11.43□□□□□ -0.58
CAPN11-202ENST00000524554 CEP95Q96GE4 821 aa11.43□□□□□ -0.58
CAPN11-202ENST00000524554 SLF1Q9BQI6 1058 aa11.43□□□□□ -0.58
CAPN11-202ENST00000524554 KIF3AQ9Y496 699 aa11.43□□□□□ -0.58
CAPN11-202ENST00000524554 ATP6V1DQ9Y5K8 247 aa11.43□□□□□ -0.58
CAPN11-202ENST00000524554 TAF6LQ9Y6J9 622 aa11.43□□□□□ -0.58
CAPN11-202ENST00000524554 DDX60LQ5H9U9 1706 aaKnown RBP11.43□□□□□ -0.58
CAPN11-202ENST00000524554 A0A0C4DFX4 3053 aa11.43□□□□□ -0.58
CAPN11-202ENST00000524554 ATP2A1O14983 1001 aa11.42□□□□□ -0.58
CAPN11-202ENST00000524554 BAG4O95429 457 aaKnown RBP11.42□□□□□ -0.58
CAPN11-202ENST00000524554 BRD1O95696 1058 aa11.42□□□□□ -0.58
CAPN11-202ENST00000524554 TLE2Q04725 743 aa11.42□□□□□ -0.58
CAPN11-202ENST00000524554 C9orf50Q5SZB4 431 aa11.42□□□□□ -0.58
CAPN11-202ENST00000524554 CPXCR1Q8N123 301 aa11.42□□□□□ -0.58
CAPN11-202ENST00000524554 BADQ92934 168 aa11.42□□□□□ -0.58
CAPN11-202ENST00000524554 LENG1Q96BZ8 264 aaPredicted RBP11.42□□□□□ -0.58
CAPN11-202ENST00000524554 ZNF274Q96GC6 653 aaPredicted RBP11.42□□□□□ -0.58
CAPN11-202ENST00000524554 LARP6Q9BRS8 491 aaKnown RBP11.42□□□□□ -0.58
CAPN11-202ENST00000524554 LLPHQ9BRT6 129 aaKnown RBP11.42□□□□□ -0.58
CAPN11-202ENST00000524554 TEX13BQ9BXU2 312 aa11.42□□□□□ -0.58
CAPN11-202ENST00000524554 AGXT2Q9BYV1 514 aa11.42□□□□□ -0.58
CAPN11-202ENST00000524554 CNNM2Q9H8M5 875 aa11.42□□□□□ -0.58
CAPN11-202ENST00000524554 RAVER2Q9HCJ3 691 aaKnown RBP11.42□□□□□ -0.58
CAPN11-202ENST00000524554 XPNPEP3Q9NQH7 507 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms