RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 NOM1Q5C9Z4 860 aaKnown RBP8.2□□□□□ -1.1
VPS11-201ENST00000524454 TATDN1Q6P1N9 297 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 CTR9Q6PD62 1173 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 SYNE3Q6ZMZ3 975 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 FASTKD5Q7L8L6 764 aaKnown RBP8.2□□□□□ -1.1
VPS11-201ENST00000524454 BRAPQ7Z569 592 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 ACER1Q8TDN7 264 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 ERO1AQ96HE7 468 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 EHD4Q9H223 541 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 LY9Q9HBG7 655 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 AS3MTQ9HBK9 375 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.2□□□□□ -1.1
VPS11-201ENST00000524454 NEDD4P46934 1319 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 VPS37CA5D8V6 355 aaPredicted RBP8.19□□□□□ -1.1
VPS11-201ENST00000524454 GOLGA6L3A6NEY3 463 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 MINDY4BA8MYZ0 360 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 H3BQV1 296 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 ARHGAP33O14559 1287 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 CPLX1O14810 134 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 ZBTB43O43298 467 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 MAP3K7O43318 606 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 PRPF40AO75400 957 aaKnown RBP8.19□□□□□ -1.1
VPS11-201ENST00000524454 CTDNEP1O95476 244 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 MYCP01106 439 aaPredicted RBP8.19□□□□□ -1.1
VPS11-201ENST00000524454 AKR1B1P15121 316 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 IFNAR1P17181 557 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 GUCY1A2P33402 732 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 CDK8P49336 464 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 METAP2P50579 478 aaKnown RBP eCLIP8.19□□□□□ -1.1
VPS11-201ENST00000524454 BACE1P56817 501 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 LACTBP83111 547 aaPredicted RBP8.19□□□□□ -1.1
VPS11-201ENST00000524454 GABPAQ06546 454 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 PDE4BQ07343 736 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 COL9A3Q14050 684 aaPredicted RBP8.19□□□□□ -1.1
VPS11-201ENST00000524454 TMEM67Q5HYA8 995 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 C6orf132Q5T0Z8 1188 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 C12orf60Q5U649 245 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 C17orf99Q6UX52 265 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 IQCA1Q86XH1 822 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 SMCR8Q8TEV9 937 aaPredicted RBP8.19□□□□□ -1.1
VPS11-201ENST00000524454 TCEANC2Q96MN5 208 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 PARK7Q99497 189 aaKnown RBP8.19□□□□□ -1.1
VPS11-201ENST00000524454 FEZ1Q99689 392 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 UBAC1Q9BSL1 405 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 EFCC1Q9HA90 598 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 RBM27Q9P2N5 1060 aaKnown RBP8.19□□□□□ -1.1
VPS11-201ENST00000524454 AGTPBP1Q9UPW5 1226 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 MORC2Q9Y6X9 1032 aaPredicted RBP8.19□□□□□ -1.1
VPS11-201ENST00000524454 GREB1LQ9C091 1923 aaPredicted RBP8.19□□□□□ -1.1
VPS11-201ENST00000524454 MYH15Q9Y2K3 1946 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 MYH4Q9Y623 1939 aa8.19□□□□□ -1.1
VPS11-201ENST00000524454 PARP14Q460N5 1801 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 CCDC69A6NI79 296 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 USP17L10C9JJH3 530 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 IFIT3O14879 490 aaKnown RBP8.18□□□□□ -1.1
VPS11-201ENST00000524454 KDM4AO75164 1064 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 DDAH1O94760 285 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 BCRP11274 1271 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 PTPREP23469 700 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 LSM11P83369 360 aaKnown RBP eCLIP8.18□□□□□ -1.1
VPS11-201ENST00000524454 RESTQ13127 1097 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 WTAPQ15007 396 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 SH3D19Q5HYK7 790 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 FBXO46Q6PJ61 603 aaPredicted RBP8.18□□□□□ -1.1
VPS11-201ENST00000524454 CYB5R4Q7L1T6 521 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 ANKRD13CQ8N6S4 541 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 PROCA1Q8NCQ7 364 aaPredicted RBP8.18□□□□□ -1.1
VPS11-201ENST00000524454 FBXO18Q8NFZ0 1043 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 ANKS1AQ92625 1134 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 TRIM47Q96LD4 638 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 ZNF396Q96N95 335 aaPredicted RBP8.18□□□□□ -1.1
VPS11-201ENST00000524454 WDR18Q9BV38 432 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 ASCC2Q9H1I8 757 aaPredicted RBP8.18□□□□□ -1.1
VPS11-201ENST00000524454 ZCCHC17Q9NP64 241 aaKnown RBP8.18□□□□□ -1.1
VPS11-201ENST00000524454 CABP5Q9NP86 173 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 TCP11L1Q9NUJ3 509 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 RBM28Q9NW13 759 aaKnown RBP8.18□□□□□ -1.1
VPS11-201ENST00000524454 TMOD4Q9NZQ9 345 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 ZSWIM5Q9P217 1185 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 BRPF3Q9ULD4 1205 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 PTPN22Q9Y2R2 807 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 SLC12A7Q9Y666 1083 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 PTCH2Q9Y6C5 1203 aa8.18□□□□□ -1.1
VPS11-201ENST00000524454 PLXNB2O15031 1838 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 A0A1W2PRG0 241 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 B4E1Z4 1266 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 JAK2O60674 1132 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 PRDM1O75626 825 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 FMNL1O95466 1100 aaPredicted RBP8.17□□□□□ -1.1
VPS11-201ENST00000524454 PSMC4P43686 418 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 ATP2B2Q01814 1243 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 STK3Q13188 491 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 KIF22Q14807 665 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 SEC23AQ15436 765 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 NTRK3Q16288 839 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 KIAA1755Q5JYT7 1200 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 C16orf86Q6ZW13 317 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 DGKHQ86XP1 1220 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 TRIM22Q8IYM9 498 aa8.17□□□□□ -1.1
VPS11-201ENST00000524454 GPT2Q8TD30 523 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms