RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 ANTXR2P58335 489 aa8.97□□□□□ -0.97
SPIDR-223ENST00000524033 CEBPZQ03701 1054 aaKnown RBP8.97□□□□□ -0.97
SPIDR-223ENST00000524033 ELF2Q15723 593 aa8.97□□□□□ -0.97
SPIDR-223ENST00000524033 CAVIN4Q5BKX8 364 aa8.97□□□□□ -0.97
SPIDR-223ENST00000524033 METTL24Q5JXM2 366 aa8.97□□□□□ -0.97
SPIDR-223ENST00000524033 MFSD14BQ5SR56 506 aa8.97□□□□□ -0.97
SPIDR-223ENST00000524033 PPP2R2DQ66LE6 453 aa8.97□□□□□ -0.97
SPIDR-223ENST00000524033 FCHSD1Q86WN1 690 aa8.97□□□□□ -0.97
SPIDR-223ENST00000524033 XPO4Q9C0E2 1151 aaKnown RBP8.97□□□□□ -0.97
SPIDR-223ENST00000524033 NAT10Q9H0A0 1025 aaKnown RBP8.97□□□□□ -0.97
SPIDR-223ENST00000524033 TMX1Q9H3N1 280 aa8.97□□□□□ -0.97
SPIDR-223ENST00000524033 VEZTQ9HBM0 779 aa8.97□□□□□ -0.97
SPIDR-223ENST00000524033 ZNF446Q9NWS9 450 aa8.97□□□□□ -0.97
SPIDR-223ENST00000524033 ANGEL1Q9UNK9 670 aaKnown RBP8.97□□□□□ -0.97
SPIDR-223ENST00000524033 HPSEQ9Y251 543 aa8.97□□□□□ -0.97
SPIDR-223ENST00000524033 PPP2R3BQ9Y5P8 575 aa8.97□□□□□ -0.97
SPIDR-223ENST00000524033 CLIC4Q9Y696 253 aa8.97□□□□□ -0.97
SPIDR-223ENST00000524033 FAM205AQ6ZU69 1335 aa8.97□□□□□ -0.97
SPIDR-223ENST00000524033 PHLPP2Q6ZVD8 1323 aa8.97□□□□□ -0.97
SPIDR-223ENST00000524033 NID2Q14112 1375 aa8.97□□□□□ -0.97
SPIDR-223ENST00000524033 MYH6P13533 1939 aa8.96□□□□□ -0.97
SPIDR-223ENST00000524033 SPDYE5A6NIY4 337 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 KIF28PB7ZC32 967 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 EYA2O00167 538 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 GOLIM4O00461 696 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 SPTLC2O15270 562 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 PDE8BO95263 885 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 TBC1D8O95759 1140 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 CMA1P23946 247 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 ME1P48163 572 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 PTPN5P54829 565 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 CCT2P78371 535 aaKnown RBP8.96□□□□□ -0.98
SPIDR-223ENST00000524033 SREBF2Q12772 1141 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 LRRC24Q50LG9 513 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 THSD4Q6ZMP0 1018 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 FBXO33Q7Z6M2 555 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 BANK1Q8NDB2 785 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 FBXO18Q8NFZ0 1043 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 OSBP2Q969R2 916 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 PRM3Q9NNZ6 103 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 SERPINA10Q9UK55 444 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 PCDHGC3Q9UN70 934 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 TTF2Q9UNY4 1162 aaKnown RBP8.96□□□□□ -0.98
SPIDR-223ENST00000524033 FZD1Q9UP38 647 aa8.96□□□□□ -0.98
SPIDR-223ENST00000524033 A0A1B0GVL5 298 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 UNCXA6NJT0 531 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 ZFYP08048 801 aaPredicted RBP8.95□□□□□ -0.98
SPIDR-223ENST00000524033 PFKFB1P16118 471 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 INHBEP58166 350 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 GUCY1B3Q02153 619 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 MLLT1Q03111 559 aaPredicted RBP8.95□□□□□ -0.98
SPIDR-223ENST00000524033 MCM6Q14566 821 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 RASA3Q14644 834 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 PTPAQ15257 358 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 TERF2Q15554 542 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 MORN1Q5T089 497 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 NBPF12Q5TAG4 269 aaPredicted RBP8.95□□□□□ -0.98
SPIDR-223ENST00000524033 TAF3Q5VWG9 929 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 SPRYD7Q5W111 196 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 ANO1Q5XXA6 986 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 TRIM65Q6PJ69 517 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 TMC6Q7Z403 805 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 FILIP1Q7Z7B0 1213 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 ELOA2Q8IYF1 753 aaPredicted RBP8.95□□□□□ -0.98
SPIDR-223ENST00000524033 LRRN4CLQ8ND94 238 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 C8orf76Q96K31 380 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 UBXN6Q9BZV1 441 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 IFNKQ9P0W0 207 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 IQSEC3Q9UPP2 1182 aaPredicted RBP8.95□□□□□ -0.98
SPIDR-223ENST00000524033 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.95□□□□□ -0.982e-6■■■■□ 25.9
SPIDR-223ENST00000524033 TNRC18O15417 2968 aaPredicted RBP8.95□□□□□ -0.98
SPIDR-223ENST00000524033 MYH2Q9UKX2 1941 aa8.95□□□□□ -0.98
SPIDR-223ENST00000524033 THSD7BQ9C0I4 1608 aa8.94□□□□□ -0.98
SPIDR-223ENST00000524033 A0A1B0GUL7 405 aa8.94□□□□□ -0.98
SPIDR-223ENST00000524033 PRC1O43663 620 aa8.94□□□□□ -0.98
SPIDR-223ENST00000524033 PPP6R2O75170 966 aa8.94□□□□□ -0.98
SPIDR-223ENST00000524033 TADA3O75528 432 aa8.94□□□□□ -0.98
SPIDR-223ENST00000524033 WDHD1O75717 1129 aaPredicted RBP8.94□□□□□ -0.98
SPIDR-223ENST00000524033 ZNF202O95125 648 aa8.94□□□□□ -0.98
SPIDR-223ENST00000524033 ZRANB2O95218 330 aaKnown RBP eCLIP8.94□□□□□ -0.98
SPIDR-223ENST00000524033 SLC3A2P08195 630 aaKnown RBP8.94□□□□□ -0.98
SPIDR-223ENST00000524033 IFIT1P09914 478 aaKnown RBP8.94□□□□□ -0.98
SPIDR-223ENST00000524033 IREB2P48200 963 aaKnown RBP8.94□□□□□ -0.98
SPIDR-223ENST00000524033 RGS19P49795 217 aa8.94□□□□□ -0.98
SPIDR-223ENST00000524033 FGD1P98174 961 aa8.94□□□□□ -0.98
SPIDR-223ENST00000524033 FANCCQ00597 558 aa8.94□□□□□ -0.98
SPIDR-223ENST00000524033 TBX2Q13207 712 aaPredicted RBP8.94□□□□□ -0.98
SPIDR-223ENST00000524033 TNFAIP1Q13829 316 aa8.94□□□□□ -0.98
SPIDR-223ENST00000524033 SLC39A14Q15043 492 aa8.94□□□□□ -0.98
SPIDR-223ENST00000524033 STK38Q15208 465 aa8.94□□□□□ -0.98
SPIDR-223ENST00000524033 OTUD7BQ6GQQ9 843 aa8.94□□□□□ -0.98
SPIDR-223ENST00000524033 CTU1Q7Z7A3 348 aaKnown RBP8.94□□□□□ -0.98
SPIDR-223ENST00000524033 TMEM139Q8IV31 216 aa8.94□□□□□ -0.98
SPIDR-223ENST00000524033 REXO1L1PQ8IX06 675 aa8.94□□□□□ -0.98
SPIDR-223ENST00000524033 TBC1D22AQ8WUA7 517 aa8.94□□□□□ -0.98
SPIDR-223ENST00000524033 APPBP2Q92624 585 aa8.94□□□□□ -0.98
SPIDR-223ENST00000524033 ERCC4Q92889 916 aaPredicted RBP8.94□□□□□ -0.98
SPIDR-223ENST00000524033 TDRD3Q9H7E2 651 aaKnown RBP8.94□□□□□ -0.98
SPIDR-223ENST00000524033 TRMT1Q9NXH9 659 aaKnown RBP8.94□□□□□ -0.98
SPIDR-223ENST00000524033 ORC3Q9UBD5 711 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms