RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 SGMS1Q86VZ5 419 aa14.65□□□□□ -0.06
VEGFA-225ENST00000523950 CHMP4CQ96CF2 233 aa14.65□□□□□ -0.06
VEGFA-225ENST00000523950 USP26Q9BXU7 913 aa14.65□□□□□ -0.06
VEGFA-225ENST00000523950 BIN2Q9UBW5 565 aaPredicted RBP14.65□□□□□ -0.06
VEGFA-225ENST00000523950 DIS3Q9Y2L1 958 aaKnown RBP14.65□□□□□ -0.06
VEGFA-225ENST00000523950 MYH6P13533 1939 aa14.64□□□□□ -0.07
VEGFA-225ENST00000523950 PALM3A6NDB9 673 aaPredicted RBP14.64□□□□□ -0.07
VEGFA-225ENST00000523950 CCDC69A6NI79 296 aa14.64□□□□□ -0.07
VEGFA-225ENST00000523950 INHAP05111 366 aa14.64□□□□□ -0.07
VEGFA-225ENST00000523950 GOLGA8HP0CJ92 632 aa14.64□□□□□ -0.07
VEGFA-225ENST00000523950 CALM1P0DP23 149 aa14.64□□□□□ -0.07
VEGFA-225ENST00000523950 CALM2P0DP24 149 aa14.64□□□□□ -0.07
VEGFA-225ENST00000523950 CALM3P0DP25 149 aa14.64□□□□□ -0.07
VEGFA-225ENST00000523950 ELNP15502 786 aa14.64□□□□□ -0.07
VEGFA-225ENST00000523950 KIF5BP33176 963 aa14.64□□□□□ -0.07
VEGFA-225ENST00000523950 EXOSC10Q01780 885 aaKnown RBP14.64□□□□□ -0.07
VEGFA-225ENST00000523950 ADCK5Q3MIX3 580 aa14.64□□□□□ -0.07
VEGFA-225ENST00000523950 OLFML2BQ68BL8 750 aa14.64□□□□□ -0.07
VEGFA-225ENST00000523950 ZNF654Q8IZM8 581 aa14.64□□□□□ -0.07
VEGFA-225ENST00000523950 TRIB2Q92519 343 aa14.64□□□□□ -0.07
VEGFA-225ENST00000523950 TMEM106CQ9BVX2 250 aa14.64□□□□□ -0.07
VEGFA-225ENST00000523950 MAF1Q9H063 256 aa14.64□□□□□ -0.07
VEGFA-225ENST00000523950 ACAD9Q9H845 621 aa14.64□□□□□ -0.07
VEGFA-225ENST00000523950 CCPG1Q9ULG6 757 aa14.64□□□□□ -0.07
VEGFA-225ENST00000523950 RIPK3Q9Y572 518 aa14.64□□□□□ -0.07
VEGFA-225ENST00000523950 SNX14Q9Y5W7 946 aa14.64□□□□□ -0.07
VEGFA-225ENST00000523950 KLRF2D3W0D1 207 aa14.63□□□□□ -0.07
VEGFA-225ENST00000523950 MFSD14CQ5VZR4 134 aa14.63□□□□□ -0.07
VEGFA-225ENST00000523950 CCDC174Q6PII3 467 aa14.63□□□□□ -0.07
VEGFA-225ENST00000523950 BLOC1S2Q6QNY1 142 aa14.63□□□□□ -0.07
VEGFA-225ENST00000523950 NFXL1Q6ZNB6 911 aa14.63□□□□□ -0.07
VEGFA-225ENST00000523950 CTCFLQ8NI51 663 aaPredicted RBP14.63□□□□□ -0.07
VEGFA-225ENST00000523950 AGBL1Q96MI9 1066 aa14.63□□□□□ -0.07
VEGFA-225ENST00000523950 RNF146Q9NTX7 359 aa14.63□□□□□ -0.07
VEGFA-225ENST00000523950 MAD2L2Q9UI95 211 aa14.63□□□□□ -0.07
VEGFA-225ENST00000523950 ALAS1P13196 640 aa14.62□□□□□ -0.07
VEGFA-225ENST00000523950 SMARCA1P28370 1054 aa14.62□□□□□ -0.07
VEGFA-225ENST00000523950 GNAQP50148 359 aa14.62□□□□□ -0.07
VEGFA-225ENST00000523950 TRAF1Q13077 416 aa14.62□□□□□ -0.07
VEGFA-225ENST00000523950 CDC37Q16543 378 aaPredicted RBP14.62□□□□□ -0.07
VEGFA-225ENST00000523950 MAP3K21Q5TCX8 1036 aa14.62□□□□□ -0.07
VEGFA-225ENST00000523950 SYNE3Q6ZMZ3 975 aa14.62□□□□□ -0.07
VEGFA-225ENST00000523950 ADGRF4Q8IZF3 695 aa14.62□□□□□ -0.07
VEGFA-225ENST00000523950 ANKRD35Q8N283 1001 aa14.62□□□□□ -0.07
VEGFA-225ENST00000523950 FBXL16Q8N461 479 aa14.62□□□□□ -0.07
VEGFA-225ENST00000523950 MSL3Q8N5Y2 521 aaKnown RBP14.62□□□□□ -0.07
VEGFA-225ENST00000523950 NPLOC4Q8TAT6 608 aa14.62□□□□□ -0.07
VEGFA-225ENST00000523950 DDX11Q96FC9 970 aa14.62□□□□□ -0.07
VEGFA-225ENST00000523950 JAKMIP1Q96N16 626 aaKnown RBP14.62□□□□□ -0.07
VEGFA-225ENST00000523950 TRERF1Q96PN7 1200 aa14.62□□□□□ -0.07
VEGFA-225ENST00000523950 LZTS2Q9BRK4 669 aa14.62□□□□□ -0.07
VEGFA-225ENST00000523950 UBA5Q9GZZ9 404 aa14.62□□□□□ -0.07
VEGFA-225ENST00000523950 SENP2Q9HC62 589 aa14.62□□□□□ -0.07
VEGFA-225ENST00000523950 SLC12A7Q9Y666 1083 aa14.62□□□□□ -0.07
VEGFA-225ENST00000523950 PFASO15067 1338 aa14.62□□□□□ -0.07
VEGFA-225ENST00000523950 RPTORQ8N122 1335 aa14.62□□□□□ -0.07
VEGFA-225ENST00000523950 HTTP42858 3142 aa14.61□□□□□ -0.07
VEGFA-225ENST00000523950 DNAJC25-GNG10A0A024R161 153 aa14.61□□□□□ -0.07
VEGFA-225ENST00000523950 DHX16O60231 1041 aaKnown RBP14.61□□□□□ -0.07
VEGFA-225ENST00000523950 COBLO75128 1261 aa14.61□□□□□ -0.07
VEGFA-225ENST00000523950 IGHA2P01877 340 aa14.61□□□□□ -0.07
VEGFA-225ENST00000523950 CCL5P13501 91 aa14.61□□□□□ -0.07
VEGFA-225ENST00000523950 SLC4A3P48751 1232 aa14.61□□□□□ -0.07
VEGFA-225ENST00000523950 RCAN1P53805 252 aa14.61□□□□□ -0.07
VEGFA-225ENST00000523950 ANAPC15P60006 121 aa14.61□□□□□ -0.07
VEGFA-225ENST00000523950 ZNF792Q3KQV3 632 aa14.61□□□□□ -0.07
VEGFA-225ENST00000523950 ZNF467Q7Z7K2 595 aaPredicted RBP14.61□□□□□ -0.07
VEGFA-225ENST00000523950 STAG2Q8N3U4 1231 aa14.61□□□□□ -0.07
VEGFA-225ENST00000523950 NUP133Q8WUM0 1156 aa14.61□□□□□ -0.07
VEGFA-225ENST00000523950 MTMR8Q96EF0 704 aa14.61□□□□□ -0.07
VEGFA-225ENST00000523950 MAML3Q96JK9 1138 aa14.61□□□□□ -0.07
VEGFA-225ENST00000523950 TM6SF1Q9BZW5 370 aa14.61□□□□□ -0.07
VEGFA-225ENST00000523950 RIOX1Q9H6W3 641 aa14.61□□□□□ -0.07
VEGFA-225ENST00000523950 HMX1Q9NP08 348 aaPredicted RBP14.61□□□□□ -0.07
VEGFA-225ENST00000523950 CAPN15O75808 1086 aa14.6□□□□□ -0.07
VEGFA-225ENST00000523950 GJB1P08034 283 aa14.6□□□□□ -0.07
VEGFA-225ENST00000523950 RPS6KB1P23443 525 aa14.6□□□□□ -0.07
VEGFA-225ENST00000523950 SNAP25P60880 206 aa14.6□□□□□ -0.07
VEGFA-225ENST00000523950 COL9A3Q14050 684 aaPredicted RBP14.6□□□□□ -0.07
VEGFA-225ENST00000523950 MTFR1Q15390 333 aa14.6□□□□□ -0.07
VEGFA-225ENST00000523950 CCL14Q16627 93 aa14.6□□□□□ -0.07
VEGFA-225ENST00000523950 SPZ1Q9BXG8 430 aa14.6□□□□□ -0.07
VEGFA-225ENST00000523950 LRRC2Q9BYS8 371 aa14.6□□□□□ -0.07
VEGFA-225ENST00000523950 RNF208Q9H0X6 261 aa14.6□□□□□ -0.07
VEGFA-225ENST00000523950 JMJD4Q9H9V9 463 aa14.6□□□□□ -0.07
VEGFA-225ENST00000523950 PAK6Q9NQU5 681 aaPredicted RBP14.6□□□□□ -0.07
VEGFA-225ENST00000523950 GPHNQ9NQX3 736 aaPredicted RBP14.6□□□□□ -0.07
VEGFA-225ENST00000523950 HOMER2Q9NSB8 354 aa14.6□□□□□ -0.07
VEGFA-225ENST00000523950 NRBP1Q9UHY1 535 aa14.6□□□□□ -0.07
VEGFA-225ENST00000523950 ABCB11O95342 1321 aa14.6□□□□□ -0.07
VEGFA-225ENST00000523950 ZBTB5O15062 677 aa14.59□□□□□ -0.07
VEGFA-225ENST00000523950 PRKAR2AP13861 404 aaKnown RBP14.59□□□□□ -0.07
VEGFA-225ENST00000523950 CASTP20810 708 aaKnown RBP14.59□□□□□ -0.07
VEGFA-225ENST00000523950 RGS19P49795 217 aa14.59□□□□□ -0.07
VEGFA-225ENST00000523950 SOX10P56693 466 aa14.59□□□□□ -0.07
VEGFA-225ENST00000523950 FGD1P98174 961 aa14.59□□□□□ -0.07
VEGFA-225ENST00000523950 PPP2R5BQ15173 497 aa14.59□□□□□ -0.07
VEGFA-225ENST00000523950 QRICH1Q2TAL8 776 aa14.59□□□□□ -0.07
VEGFA-225ENST00000523950 APOA5Q6Q788 366 aa14.59□□□□□ -0.07
VEGFA-225ENST00000523950 FBXO11Q86XK2 927 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms