RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 SHROOM2Q13796 1616 aa6.94□□□□□ -1.3
NSMCE2-211ENST00000523549 TDRD9Q8NDG6 1382 aaKnown RBP6.94□□□□□ -1.3
NSMCE2-211ENST00000523549 SSU72P8A0A1W2PR75 194 aa6.93□□□□□ -1.3
NSMCE2-211ENST00000523549 EIF4A3P38919 411 aaKnown RBP6.93□□□□□ -1.3
NSMCE2-211ENST00000523549 KIR3DS1Q14943 382 aa6.93□□□□□ -1.3
NSMCE2-211ENST00000523549 OVOS1Q6IE37 1185 aa6.93□□□□□ -1.3
NSMCE2-211ENST00000523549 FCRL2Q96LA5 508 aaPredicted RBP6.93□□□□□ -1.3
NSMCE2-211ENST00000523549 VTI1BQ9UEU0 232 aa6.93□□□□□ -1.3
NSMCE2-211ENST00000523549 MINPP1Q9UNW1 487 aa6.93□□□□□ -1.3
NSMCE2-211ENST00000523549 ADAMTSL3P82987 1691 aa6.93□□□□□ -1.3
NSMCE2-211ENST00000523549 PBRM1Q86U86 1689 aa6.93□□□□□ -1.3
NSMCE2-211ENST00000523549 ABLIM1O14639 778 aa6.92□□□□□ -1.3
NSMCE2-211ENST00000523549 FKTNO75072 461 aa6.92□□□□□ -1.3
NSMCE2-211ENST00000523549 CRKP46108 304 aa6.92□□□□□ -1.3
NSMCE2-211ENST00000523549 AFF3P51826 1226 aaKnown RBP6.92□□□□□ -1.3
NSMCE2-211ENST00000523549 CDR1P51861 262 aa6.92□□□□□ -1.3
NSMCE2-211ENST00000523549 HSF5Q4G112 596 aaPredicted RBP6.92□□□□□ -1.3
NSMCE2-211ENST00000523549 CXorf38Q8TB03 319 aa6.92□□□□□ -1.3
NSMCE2-211ENST00000523549 MZB1Q8WU39 189 aa6.92□□□□□ -1.3
NSMCE2-211ENST00000523549 ZNF296Q8WUU4 475 aaPredicted RBP6.92□□□□□ -1.3
NSMCE2-211ENST00000523549 SUPT16HQ9Y5B9 1047 aaKnown RBP6.92□□□□□ -1.3
NSMCE2-211ENST00000523549 RAD54L2Q9Y4B4 1467 aa6.92□□□□□ -1.3
NSMCE2-211ENST00000523549 WTIPA6NIX2 430 aaPredicted RBP6.91□□□□□ -1.3
NSMCE2-211ENST00000523549 NFIXQ14938 502 aa6.91□□□□□ -1.3
NSMCE2-211ENST00000523549 GALNT18Q6P9A2 607 aa6.91□□□□□ -1.3
NSMCE2-211ENST00000523549 SLCO6A1Q86UG4 719 aa6.91□□□□□ -1.3
NSMCE2-211ENST00000523549 IGDCC3Q8IVU1 814 aa6.91□□□□□ -1.3
NSMCE2-211ENST00000523549 REXO1Q8N1G1 1221 aaKnown RBP6.91□□□□□ -1.3
NSMCE2-211ENST00000523549 MRS2Q9HD23 443 aa6.91□□□□□ -1.3
NSMCE2-211ENST00000523549 CHST7Q9NS84 486 aa6.91□□□□□ -1.3
NSMCE2-211ENST00000523549 WIZO95785 1651 aa6.9□□□□□ -1.3
NSMCE2-211ENST00000523549 OTOL1A6NHN0 477 aaPredicted RBP6.9□□□□□ -1.3
NSMCE2-211ENST00000523549 CLEC3AO75596 197 aa6.9□□□□□ -1.3
NSMCE2-211ENST00000523549 ZNF205O95201 554 aa6.9□□□□□ -1.3
NSMCE2-211ENST00000523549 SYN1P17600 705 aa6.9□□□□□ -1.3
NSMCE2-211ENST00000523549 BMP8BP34820 402 aa6.9□□□□□ -1.3
NSMCE2-211ENST00000523549 CTSKP43235 329 aa6.9□□□□□ -1.3
NSMCE2-211ENST00000523549 CLCQ05315 142 aa6.9□□□□□ -1.3
NSMCE2-211ENST00000523549 LAPTM5Q13571 262 aa6.9□□□□□ -1.3
NSMCE2-211ENST00000523549 CBX2Q14781 532 aaPredicted RBP6.9□□□□□ -1.3
NSMCE2-211ENST00000523549 NLRC3Q7RTR2 1065 aa6.9□□□□□ -1.3
NSMCE2-211ENST00000523549 LDHDQ86WU2 507 aa6.9□□□□□ -1.3
NSMCE2-211ENST00000523549 FAM129CQ86XR2 697 aa6.9□□□□□ -1.3
NSMCE2-211ENST00000523549 TMEM192Q8IY95 271 aa6.9□□□□□ -1.3
NSMCE2-211ENST00000523549 TMEM52Q8NDY8 209 aa6.9□□□□□ -1.3
NSMCE2-211ENST00000523549 ZNF512BQ96KM6 892 aaPredicted RBP6.9□□□□□ -1.3
NSMCE2-211ENST00000523549 ERVK13-1Q9NX77 482 aa6.9□□□□□ -1.3
NSMCE2-211ENST00000523549 ACSL6Q9UKU0 697 aa6.9□□□□□ -1.3
NSMCE2-211ENST00000523549 JAG2Q9Y219 1238 aa6.9□□□□□ -1.3
NSMCE2-211ENST00000523549 POLA1P09884 1462 aaPredicted RBP6.9□□□□□ -1.31
NSMCE2-211ENST00000523549 TNFRSF10CO14798 259 aa6.89□□□□□ -1.31
NSMCE2-211ENST00000523549 MPOP05164 745 aa6.89□□□□□ -1.31
NSMCE2-211ENST00000523549 NME1P15531 152 aaKnown RBP6.89□□□□□ -1.31
NSMCE2-211ENST00000523549 OLFML2BQ68BL8 750 aa6.89□□□□□ -1.31
NSMCE2-211ENST00000523549 ADAMTS1Q9UHI8 967 aa6.89□□□□□ -1.31
NSMCE2-211ENST00000523549 GPR55Q9Y2T6 319 aaPredicted RBP6.89□□□□□ -1.31
NSMCE2-211ENST00000523549 PCDHA5Q9Y5H7 936 aa6.89□□□□□ -1.31
NSMCE2-211ENST00000523549 MADDQ8WXG6 1647 aa6.89□□□□□ -1.31
NSMCE2-211ENST00000523549 A0A1W2PQ45 241 aaPredicted RBP6.88□□□□□ -1.31
NSMCE2-211ENST00000523549 A0A1W2PQY0 241 aa6.88□□□□□ -1.31
NSMCE2-211ENST00000523549 MEIS3P2A8K0S8 358 aa6.88□□□□□ -1.31
NSMCE2-211ENST00000523549 SASH1O94885 1247 aa6.88□□□□□ -1.31
NSMCE2-211ENST00000523549 KRTAP10-2P60368 255 aa6.88□□□□□ -1.31
NSMCE2-211ENST00000523549 CNKSR3Q6P9H4 555 aa6.88□□□□□ -1.31
NSMCE2-211ENST00000523549 AEBP1Q8IUX7 1158 aa6.88□□□□□ -1.31
NSMCE2-211ENST00000523549 ANTXR1Q9H6X2 564 aa6.88□□□□□ -1.31
NSMCE2-211ENST00000523549 TNFRSF12AQ9NP84 129 aa6.88□□□□□ -1.31
NSMCE2-211ENST00000523549 PRR13Q9NZ81 148 aa6.88□□□□□ -1.31
NSMCE2-211ENST00000523549 IRS2Q9Y4H2 1338 aa6.87□□□□□ -1.31
NSMCE2-211ENST00000523549 VAV1P15498 845 aa6.87□□□□□ -1.31
NSMCE2-211ENST00000523549 ERCC3P19447 782 aa6.87□□□□□ -1.31
NSMCE2-211ENST00000523549 ENDOUP21128 410 aaKnown RBP6.87□□□□□ -1.31
NSMCE2-211ENST00000523549 ITGAEP38570 1179 aa6.87□□□□□ -1.31
NSMCE2-211ENST00000523549 VMACQ2NL98 169 aa6.87□□□□□ -1.31
NSMCE2-211ENST00000523549 SKOR2Q2VWA4 1001 aaPredicted RBP6.87□□□□□ -1.31
NSMCE2-211ENST00000523549 GFOD1Q9NXC2 390 aa6.87□□□□□ -1.31
NSMCE2-211ENST00000523549 UBP1Q9NZI7 540 aa6.87□□□□□ -1.31
NSMCE2-211ENST00000523549 SETD1AO15047 1707 aaKnown RBP6.87□□□□□ -1.31
NSMCE2-211ENST00000523549 WDR97A6NE52 1622 aa6.87□□□□□ -1.31
NSMCE2-211ENST00000523549 PRKCAP17252 672 aa6.86□□□□□ -1.31
NSMCE2-211ENST00000523549 ARL4AP40617 200 aa6.86□□□□□ -1.31
NSMCE2-211ENST00000523549 CYP4F8P98187 520 aa6.86□□□□□ -1.31
NSMCE2-211ENST00000523549 AUHQ13825 339 aaKnown RBP6.86□□□□□ -1.31
NSMCE2-211ENST00000523549 LRRFIP1Q32MZ4 808 aaKnown RBP6.86□□□□□ -1.31
NSMCE2-211ENST00000523549 SEZ6Q53EL9 994 aa6.86□□□□□ -1.31
NSMCE2-211ENST00000523549 GK5Q6ZS86 529 aa6.86□□□□□ -1.31
NSMCE2-211ENST00000523549 SLITRK4Q8IW52 837 aa6.86□□□□□ -1.31
NSMCE2-211ENST00000523549 TP53I13Q8NBR0 393 aaPredicted RBP6.86□□□□□ -1.31
NSMCE2-211ENST00000523549 FEZF2Q8TBJ5 459 aa6.86□□□□□ -1.31
NSMCE2-211ENST00000523549 SLC9A7Q96T83 725 aa6.86□□□□□ -1.31
NSMCE2-211ENST00000523549 TAF6LQ9Y6J9 622 aa6.86□□□□□ -1.31
NSMCE2-211ENST00000523549 RIMS1Q86UR5 1692 aaKnown RBP6.86□□□□□ -1.31
NSMCE2-211ENST00000523549 ABCC8Q09428 1581 aa6.86□□□□□ -1.31
NSMCE2-211ENST00000523549 GRIN2BQ13224 1484 aa6.85□□□□□ -1.31
NSMCE2-211ENST00000523549 STRCQ7RTU9 1775 aa6.85□□□□□ -1.31
NSMCE2-211ENST00000523549 CAP1Q01518 475 aa6.85□□□□□ -1.31
NSMCE2-211ENST00000523549 TMEM62Q0P6H9 643 aa6.85□□□□□ -1.31
NSMCE2-211ENST00000523549 RAB3GAP1Q15042 981 aa6.85□□□□□ -1.31
NSMCE2-211ENST00000523549 RTP2Q5QGT7 225 aa6.85□□□□□ -1.31
NSMCE2-211ENST00000523549 LINC01356Q8N9X3 169 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms