RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 FAM13BQ9NYF5 915 aa23.72■■□□□ 1.39
SQLE-206ENST00000523430 DICER1Q9UPY3 1922 aaKnown RBP23.72■■□□□ 1.39
SQLE-206ENST00000523430 ATAD5Q96QE3 1844 aa23.72■■□□□ 1.39
SQLE-206ENST00000523430 LMNB1P20700 586 aa23.71■■□□□ 1.39
SQLE-206ENST00000523430 CAP2P40123 477 aa23.71■■□□□ 1.39
SQLE-206ENST00000523430 MAP3K10Q02779 954 aa23.71■■□□□ 1.39
SQLE-206ENST00000523430 CCDC173Q0VFZ6 552 aa23.71■■□□□ 1.39
SQLE-206ENST00000523430 CDC37Q16543 378 aaPredicted RBP23.71■■□□□ 1.39
SQLE-206ENST00000523430 QRICH1Q2TAL8 776 aa23.71■■□□□ 1.39
SQLE-206ENST00000523430 KIAA1755Q5JYT7 1200 aa23.71■■□□□ 1.39
SQLE-206ENST00000523430 BIN2Q9UBW5 565 aaPredicted RBP23.71■■□□□ 1.39
SQLE-206ENST00000523430 SYNPO2Q9UMS6 1093 aa23.71■■□□□ 1.39
SQLE-206ENST00000523430 VWA3AA6NCI4 1184 aa23.7■■□□□ 1.39
SQLE-206ENST00000523430 IL17AQ16552 155 aa23.7■■□□□ 1.39
SQLE-206ENST00000523430 LONRF3Q496Y0 759 aa23.7■■□□□ 1.39
SQLE-206ENST00000523430 JAKMIP3Q5VZ66 844 aa23.7■■□□□ 1.39
SQLE-206ENST00000523430 BMP3P12645 472 aa23.7■■□□□ 1.38
SQLE-206ENST00000523430 NONOQ15233 471 aaKnown RBP eCLIP23.7■■□□□ 1.38
SQLE-206ENST00000523430 STX1AQ16623 288 aa23.7■■□□□ 1.38
SQLE-206ENST00000523430 C11orf57Q6ZUT1 292 aaPredicted RBP23.7■■□□□ 1.38
SQLE-206ENST00000523430 CCDC84Q86UT8 332 aaPredicted RBP23.7■■□□□ 1.38
SQLE-206ENST00000523430 C4orf32Q8N8J7 132 aa23.7■■□□□ 1.38
SQLE-206ENST00000523430 TMX2Q9Y320 296 aa23.7■■□□□ 1.38
SQLE-206ENST00000523430 SNAP25P60880 206 aa23.69■■□□□ 1.38
SQLE-206ENST00000523430 UVSSAQ2YD98 709 aa23.69■■□□□ 1.38
SQLE-206ENST00000523430 KRBA2Q6ZNG9 492 aa23.69■■□□□ 1.38
SQLE-206ENST00000523430 TRPM4Q8TD43 1214 aa23.69■■□□□ 1.38
SQLE-206ENST00000523430 SYMPKQ92797 1274 aaKnown RBP23.69■■□□□ 1.38
SQLE-206ENST00000523430 EPSTI1Q96J88 318 aa23.69■■□□□ 1.38
SQLE-206ENST00000523430 PPP1R9BQ96SB3 815 aa23.69■■□□□ 1.38
SQLE-206ENST00000523430 CBX8Q9HC52 389 aa23.69■■□□□ 1.38
SQLE-206ENST00000523430 KIAA1468Q9P260 1216 aa23.69■■□□□ 1.38
SQLE-206ENST00000523430 PHF20L1A8MW92 1017 aa23.68■■□□□ 1.38
SQLE-206ENST00000523430 TMEM232C9JQI7 657 aa23.68■■□□□ 1.38
SQLE-206ENST00000523430 POLR2DO15514 142 aaKnown RBP23.68■■□□□ 1.38
SQLE-206ENST00000523430 LUZP1Q86V48 1076 aa23.68■■□□□ 1.38
SQLE-206ENST00000523430 GLIS2Q9BZE0 524 aaPredicted RBP23.68■■□□□ 1.38
SQLE-206ENST00000523430 SBF1O95248 1867 aa23.68■■□□□ 1.38
SQLE-206ENST00000523430 IKQ13123 557 aaPredicted RBP23.68■■□□□ 1.38
SQLE-206ENST00000523430 UBE2SQ16763 222 aa23.68■■□□□ 1.38
SQLE-206ENST00000523430 SYDE2Q5VT97 1194 aa23.68■■□□□ 1.38
SQLE-206ENST00000523430 CNNM3Q8NE01 707 aa23.68■■□□□ 1.38
SQLE-206ENST00000523430 DEFB129Q9H1M3 183 aa23.68■■□□□ 1.38
SQLE-206ENST00000523430 RIC8AQ9NPQ8 531 aa23.68■■□□□ 1.38
SQLE-206ENST00000523430 A0A087X0B3 334 aa23.67■■□□□ 1.38
SQLE-206ENST00000523430 ZYXQ15942 572 aaKnown RBP23.67■■□□□ 1.38
SQLE-206ENST00000523430 PDILTQ8N807 584 aa23.67■■□□□ 1.38
SQLE-206ENST00000523430 TBCKQ8TEA7 893 aa23.67■■□□□ 1.38
SQLE-206ENST00000523430 TMEM60Q9H2L4 133 aa23.67■■□□□ 1.38
SQLE-206ENST00000523430 GOPCQ9HD26 462 aa23.67■■□□□ 1.38
SQLE-206ENST00000523430 GPRC5DQ9NZD1 345 aa23.67■■□□□ 1.38
SQLE-206ENST00000523430 USP25Q9UHP3 1055 aa23.67■■□□□ 1.38
SQLE-206ENST00000523430 H7C1D1 291 aa23.66■■□□□ 1.38
SQLE-206ENST00000523430 PNOCQ13519 176 aa23.66■■□□□ 1.38
SQLE-206ENST00000523430 LETM2Q2VYF4 491 aa23.66■■□□□ 1.38
SQLE-206ENST00000523430 NEK8Q86SG6 692 aa23.66■■□□□ 1.38
SQLE-206ENST00000523430 GPC2Q8N158 579 aa23.66■■□□□ 1.38
SQLE-206ENST00000523430 FOXN1O15353 648 aa23.66■■□□□ 1.38
SQLE-206ENST00000523430 ZNF165P49910 485 aa23.66■■□□□ 1.38
SQLE-206ENST00000523430 FAM83BQ5T0W9 1011 aa23.66■■□□□ 1.38
SQLE-206ENST00000523430 ANGEL2Q5VTE6 544 aaKnown RBP23.66■■□□□ 1.38
SQLE-206ENST00000523430 CUL5Q93034 780 aa23.66■■□□□ 1.38
SQLE-206ENST00000523430 PDLIM2Q96JY6 352 aa23.66■■□□□ 1.38
SQLE-206ENST00000523430 SERTAD1Q9UHV2 236 aa23.66■■□□□ 1.38
SQLE-206ENST00000523430 ACTN4O43707 911 aaKnown RBP23.65■■□□□ 1.38
SQLE-206ENST00000523430 CCNT1O60563 726 aaKnown RBP23.65■■□□□ 1.38
SQLE-206ENST00000523430 ASNSP08243 561 aa23.65■■□□□ 1.38
SQLE-206ENST00000523430 TAL1P17542 331 aaPredicted RBP23.65■■□□□ 1.38
SQLE-206ENST00000523430 CLK2P49760 499 aaKnown RBP23.65■■□□□ 1.38
SQLE-206ENST00000523430 ARL6IP4Q66PJ3 421 aaKnown RBP23.65■■□□□ 1.38
SQLE-206ENST00000523430 BTNL9Q6UXG8 535 aa23.65■■□□□ 1.38
SQLE-206ENST00000523430 SYT17Q9BSW7 474 aa23.65■■□□□ 1.38
SQLE-206ENST00000523430 ANO10Q9NW15 660 aa23.65■■□□□ 1.38
SQLE-206ENST00000523430 PCDHA1Q9Y5I3 950 aa23.65■■□□□ 1.38
SQLE-206ENST00000523430 BIN1O00499 593 aa23.64■■□□□ 1.38
SQLE-206ENST00000523430 NBPF12Q5TAG4 269 aaPredicted RBP23.64■■□□□ 1.38
SQLE-206ENST00000523430 VCPKMTQ9H867 229 aa23.64■■□□□ 1.38
SQLE-206ENST00000523430 SRCAPQ6ZRS2 3230 aa23.64■■□□□ 1.37
SQLE-206ENST00000523430 DPCR1Q3MIW9 517 aa23.64■■□□□ 1.37
SQLE-206ENST00000523430 DHX58Q96C10 678 aa23.64■■□□□ 1.37
SQLE-206ENST00000523430 PRR12Q9ULL5 1215 aa23.64■■□□□ 1.37
SQLE-206ENST00000523430 YBX3P16989 372 aaKnown RBP eCLIP23.63■■□□□ 1.372e-8■□□□□ 10.4
SQLE-206ENST00000523430 EPS15P42566 896 aa23.63■■□□□ 1.37
SQLE-206ENST00000523430 STAT2P52630 851 aa23.63■■□□□ 1.37
SQLE-206ENST00000523430 GRAMD1CQ8IYS0 662 aa23.63■■□□□ 1.37
SQLE-206ENST00000523430 PSTPIP2Q9H939 334 aa23.63■■□□□ 1.37
SQLE-206ENST00000523430 AP5Z1O43299 807 aa23.62■■□□□ 1.37
SQLE-206ENST00000523430 PRR29P0C7W0 189 aa23.62■■□□□ 1.37
SQLE-206ENST00000523430 ZNF341Q9BYN7 854 aa23.62■■□□□ 1.37
SQLE-206ENST00000523430 SH2D4AQ9H788 454 aa23.62■■□□□ 1.37
SQLE-206ENST00000523430 GGA3Q9NZ52 723 aa23.62■■□□□ 1.37
SQLE-206ENST00000523430 TUBE1Q9UJT0 475 aa23.62■■□□□ 1.37
SQLE-206ENST00000523430 NEMFO60524 1076 aa23.62■■□□□ 1.37
SQLE-206ENST00000523430 CAVIN2O95810 425 aa23.62■■□□□ 1.37
SQLE-206ENST00000523430 MDM2Q00987 491 aaPredicted RBP23.62■■□□□ 1.37
SQLE-206ENST00000523430 USH1GQ495M9 461 aa23.62■■□□□ 1.37
SQLE-206ENST00000523430 AMNQ9BXJ7 453 aa23.62■■□□□ 1.37
SQLE-206ENST00000523430 EDIL3O43854 480 aa23.61■■□□□ 1.37
SQLE-206ENST00000523430 MRPL12P52815 198 aaKnown RBP23.61■■□□□ 1.37
SQLE-206ENST00000523430 POSTNQ15063 836 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms