RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 FPGSQ05932 587 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 CACNB2Q08289 660 aaPredicted RBP4.79□□□□□ -1.64
NPM1-210ENST00000523339 CAVIN4Q5BKX8 364 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 PRRT2Q7Z6L0 340 aaPredicted RBP4.79□□□□□ -1.64
NPM1-210ENST00000523339 SCYL3Q8IZE3 742 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 ZNF295-AS1Q8N0V1 137 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 ARRDC4Q8NCT1 418 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 TBC1D22AQ8WUA7 517 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 METTL22Q9BUU2 404 aaPredicted RBP4.79□□□□□ -1.64
NPM1-210ENST00000523339 CHMP4AQ9BY43 222 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 KRTAP9-2Q9BYQ4 174 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 PHAXQ9H814 394 aaKnown RBP4.79□□□□□ -1.64
NPM1-210ENST00000523339 SLC28A3Q9HAS3 691 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.79□□□□□ -1.643e-11■■□□□ 11.4
NPM1-210ENST00000523339 CXXC1Q9P0U4 656 aaPredicted RBP4.79□□□□□ -1.64
NPM1-210ENST00000523339 IQSEC3Q9UPP2 1182 aaPredicted RBP4.79□□□□□ -1.64
NPM1-210ENST00000523339 AGTPBP1Q9UPW5 1226 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 MAP3K2Q9Y2U5 619 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 COL4A1P02462 1669 aa4.79□□□□□ -1.64
NPM1-210ENST00000523339 LAMA2P24043 3122 aaKnown RBP4.79□□□□□ -1.64
NPM1-210ENST00000523339 ELL2O00472 640 aaPredicted RBP4.78□□□□□ -1.64
NPM1-210ENST00000523339 PQBP1O60828 265 aaKnown RBP4.78□□□□□ -1.64
NPM1-210ENST00000523339 PTPRAP18433 802 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 GYG1P46976 350 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 KCNQ1P51787 676 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 ATP2B2Q01814 1243 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 TFF2Q03403 129 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 CCDC57Q2TAC2 916 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 TRIM60Q495X7 471 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 NOL9Q5SY16 702 aaKnown RBP4.78□□□□□ -1.64
NPM1-210ENST00000523339 GJC2Q5T442 439 aaPredicted RBP4.78□□□□□ -1.64
NPM1-210ENST00000523339 DUSP27Q5VZP5 1158 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 DIEXFQ68CQ4 756 aaKnown RBP4.78□□□□□ -1.64
NPM1-210ENST00000523339 LDHAL6AQ6ZMR3 332 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 GOLGA6L1Q8N7Z2 621 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 GPRC5AQ8NFJ5 357 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 FAM151AQ8WW52 585 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 FERMT2Q96AC1 680 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 PAGR1Q9BTK6 254 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 STK31Q9BXU1 1019 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 MTIF3Q9H2K0 278 aaKnown RBP4.78□□□□□ -1.64
NPM1-210ENST00000523339 CRISPLD1Q9H336 500 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 MYH16Q9H6N6 1097 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 TMEM39AQ9NV64 488 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 TMOD4Q9NZQ9 345 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 DDX20Q9UHI6 824 aaKnown RBP4.78□□□□□ -1.64
NPM1-210ENST00000523339 GDF2Q9UK05 429 aaPredicted RBP4.78□□□□□ -1.64
NPM1-210ENST00000523339 ATXN7L1Q9ULK2 861 aaPredicted RBP4.78□□□□□ -1.64
NPM1-210ENST00000523339 PHF24Q9UPV7 400 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 TACC3Q9Y6A5 838 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 NDUFB9Q9Y6M9 179 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 IVNS1ABPQ9Y6Y0 642 aa4.78□□□□□ -1.64
NPM1-210ENST00000523339 COL2A1P02458 1487 aaPredicted RBP4.77□□□□□ -1.65
NPM1-210ENST00000523339 KRTAP9-6A0A140TA67 174 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 PRR33A8MZF0 331 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 CLTBP09497 229 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 XRCC5P13010 732 aaKnown RBP4.77□□□□□ -1.65
NPM1-210ENST00000523339 ATP4AP20648 1035 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 MAPK4P31152 587 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 HMGCS2P54868 508 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 HDLBPQ00341 1268 aaKnown RBP4.77□□□□□ -1.65
NPM1-210ENST00000523339 TNP2Q05952 138 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 MOGSQ13724 837 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 DOC2BQ14184 412 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 RAB30Q15771 203 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 CWF19L2Q2TBE0 894 aaKnown RBP4.77□□□□□ -1.65
NPM1-210ENST00000523339 GNASQ5JWF2 1037 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 TREML2Q5T2D2 321 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 FKBP1CQ5VVH2 108 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 SLC39A5Q6ZMH5 540 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 FCHSD1Q86WN1 690 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 RNF135Q8IUD6 432 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 RHBDD1Q8TEB9 315 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 LPAR1Q92633 364 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 ZDHHC15Q96MV8 337 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 APBA2Q99767 749 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 USP40Q9NVE5 1235 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 AFG3L2Q9Y4W6 797 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 PCDHGC4Q9Y5F7 938 aa4.77□□□□□ -1.65
NPM1-210ENST00000523339 DDX60LQ5H9U9 1706 aaKnown RBP4.77□□□□□ -1.65
NPM1-210ENST00000523339 PI4KAP2A4QPH2 592 aa4.76□□□□□ -1.65
NPM1-210ENST00000523339 TMEM229AB2RXF0 380 aa4.76□□□□□ -1.65
NPM1-210ENST00000523339 CTNND1O60716 968 aaKnown RBP4.76□□□□□ -1.65
NPM1-210ENST00000523339 MAPTP10636 758 aaKnown RBP4.76□□□□□ -1.65
NPM1-210ENST00000523339 ALADP13716 330 aa4.76□□□□□ -1.65
NPM1-210ENST00000523339 ADCYAP1R1P41586 468 aa4.76□□□□□ -1.65
NPM1-210ENST00000523339 PLA2G4AP47712 749 aa4.76□□□□□ -1.65
NPM1-210ENST00000523339 DGKGP49619 791 aa4.76□□□□□ -1.65
NPM1-210ENST00000523339 CCNA1P78396 465 aa4.76□□□□□ -1.65
NPM1-210ENST00000523339 NHLH1Q02575 133 aa4.76□□□□□ -1.65
NPM1-210ENST00000523339 TLE2Q04725 743 aa4.76□□□□□ -1.65
NPM1-210ENST00000523339 SPP2Q13103 211 aa4.76□□□□□ -1.65
NPM1-210ENST00000523339 USP4Q13107 963 aa4.76□□□□□ -1.65
NPM1-210ENST00000523339 PICALMQ13492 652 aa4.76□□□□□ -1.65
NPM1-210ENST00000523339 LBRQ14739 615 aaKnown RBP4.76□□□□□ -1.65
NPM1-210ENST00000523339 CCL14Q16627 93 aa4.76□□□□□ -1.65
NPM1-210ENST00000523339 OXLD1Q5BKU9 147 aa4.76□□□□□ -1.65
NPM1-210ENST00000523339 EFHC2Q5JST6 749 aa4.76□□□□□ -1.65
NPM1-210ENST00000523339 MAP3K21Q5TCX8 1036 aa4.76□□□□□ -1.65
NPM1-210ENST00000523339 CCDC30Q5VVM6 783 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms