RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 ITPRIPQ8IWB1 547 aa9.82□□□□□ -0.84
PVT1-213ENST00000522414 FTSJ3Q8IY81 847 aaKnown RBP9.82□□□□□ -0.84
PVT1-213ENST00000522414 RAET1EQ8TD07 263 aa9.82□□□□□ -0.84
PVT1-213ENST00000522414 PANK1Q8TE04 598 aa9.82□□□□□ -0.84
PVT1-213ENST00000522414 TGFBRAP1Q8WUH2 860 aa9.82□□□□□ -0.84
PVT1-213ENST00000522414 EAF2Q96CJ1 260 aaPredicted RBP9.82□□□□□ -0.84
PVT1-213ENST00000522414 PARK7Q99497 189 aaKnown RBP9.82□□□□□ -0.84
PVT1-213ENST00000522414 OSBPL5Q9H0X9 879 aaPredicted RBP9.82□□□□□ -0.84
PVT1-213ENST00000522414 PIH1D3Q9NQM4 214 aaKnown RBP9.82□□□□□ -0.84
PVT1-213ENST00000522414 TLR7Q9NYK1 1049 aaKnown RBP9.82□□□□□ -0.84
PVT1-213ENST00000522414 BIN2Q9UBW5 565 aaPredicted RBP9.82□□□□□ -0.84
PVT1-213ENST00000522414 MYPNQ86TC9 1320 aa9.82□□□□□ -0.84
PVT1-213ENST00000522414 MAST2Q6P0Q8 1798 aa9.81□□□□□ -0.84
PVT1-213ENST00000522414 SHISA8B8ZZ34 492 aa9.81□□□□□ -0.84
PVT1-213ENST00000522414 COL8A1P27658 744 aa9.81□□□□□ -0.84
PVT1-213ENST00000522414 GRK4P32298 578 aa9.81□□□□□ -0.84
PVT1-213ENST00000522414 CAP2P40123 477 aa9.81□□□□□ -0.84
PVT1-213ENST00000522414 PRMT2P55345 433 aa9.81□□□□□ -0.84
PVT1-213ENST00000522414 DYNLL1P63167 89 aaKnown RBP9.81□□□□□ -0.84
PVT1-213ENST00000522414 SHROOM1Q2M3G4 852 aaPredicted RBP9.81□□□□□ -0.84
PVT1-213ENST00000522414 C1orf229Q6ZS94 237 aaPredicted RBP9.81□□□□□ -0.84
PVT1-213ENST00000522414 MAPKAPK5Q8IW41 473 aa9.81□□□□□ -0.84
PVT1-213ENST00000522414 Q8N3U1 123 aa9.81□□□□□ -0.84
PVT1-213ENST00000522414 ZNF280CQ8ND82 737 aa9.81□□□□□ -0.84
PVT1-213ENST00000522414 TRERF1Q96PN7 1200 aa9.81□□□□□ -0.84
PVT1-213ENST00000522414 GRIP2Q9C0E4 1043 aa9.81□□□□□ -0.84
PVT1-213ENST00000522414 GPR108Q9NPR9 543 aa9.81□□□□□ -0.84
PVT1-213ENST00000522414 DBNLQ9UJU6 430 aaKnown RBP9.81□□□□□ -0.84
PVT1-213ENST00000522414 PALD1Q9ULE6 856 aa9.81□□□□□ -0.84
PVT1-213ENST00000522414 NOP58Q9Y2X3 529 aaKnown RBP9.81□□□□□ -0.84
PVT1-213ENST00000522414 NDUFB9Q9Y6M9 179 aa9.81□□□□□ -0.84
PVT1-213ENST00000522414 PTPRFP10586 1907 aa9.81□□□□□ -0.84
PVT1-213ENST00000522414 COL2A1P02458 1487 aaPredicted RBP9.8□□□□□ -0.84
PVT1-213ENST00000522414 PHIPQ8WWQ0 1821 aa9.8□□□□□ -0.84
PVT1-213ENST00000522414 PEX10O60683 326 aa9.8□□□□□ -0.84
PVT1-213ENST00000522414 BAG3O95817 575 aa9.8□□□□□ -0.84
PVT1-213ENST00000522414 MAP4K4O95819 1239 aaPredicted RBP9.8□□□□□ -0.84
PVT1-213ENST00000522414 CCL5P13501 91 aa9.8□□□□□ -0.84
PVT1-213ENST00000522414 ELNP15502 786 aa9.8□□□□□ -0.84
PVT1-213ENST00000522414 FLT3LGP49771 235 aa9.8□□□□□ -0.84
PVT1-213ENST00000522414 HMGCS2P54868 508 aa9.8□□□□□ -0.84
PVT1-213ENST00000522414 FCGRTP55899 365 aa9.8□□□□□ -0.84
PVT1-213ENST00000522414 SH3D19Q5HYK7 790 aa9.8□□□□□ -0.84
PVT1-213ENST00000522414 ANKRD13CQ8N6S4 541 aa9.8□□□□□ -0.84
PVT1-213ENST00000522414 SMCR8Q8TEV9 937 aaPredicted RBP9.8□□□□□ -0.84
PVT1-213ENST00000522414 BCL11AQ9H165 835 aa9.8□□□□□ -0.84
PVT1-213ENST00000522414 PI4KBQ9UBF8 816 aa9.8□□□□□ -0.84
PVT1-213ENST00000522414 SAP30BPQ9UHR5 308 aaKnown RBP9.8□□□□□ -0.84
PVT1-213ENST00000522414 H0YGN5 161 aa9.79□□□□□ -0.84
PVT1-213ENST00000522414 ADCY3O60266 1144 aa9.79□□□□□ -0.84
PVT1-213ENST00000522414 FURINP09958 794 aa9.79□□□□□ -0.84
PVT1-213ENST00000522414 CYP7A1P22680 504 aa9.79□□□□□ -0.84
PVT1-213ENST00000522414 HABP4Q5JVS0 413 aaKnown RBP9.79□□□□□ -0.84
PVT1-213ENST00000522414 FOXP4Q8IVH2 680 aaPredicted RBP9.79□□□□□ -0.84
PVT1-213ENST00000522414 SHISA4Q96DD7 197 aa9.79□□□□□ -0.84
PVT1-213ENST00000522414 ZNF512BQ96KM6 892 aaPredicted RBP9.79□□□□□ -0.84
PVT1-213ENST00000522414 NOL10Q9BSC4 688 aaKnown RBP9.79□□□□□ -0.84
PVT1-213ENST00000522414 OXCT2Q9BYC2 517 aaPredicted RBP9.79□□□□□ -0.84
PVT1-213ENST00000522414 RNF208Q9H0X6 261 aa9.79□□□□□ -0.84
PVT1-213ENST00000522414 ANTXR1Q9H6X2 564 aa9.79□□□□□ -0.84
PVT1-213ENST00000522414 AGTPBP1Q9UPW5 1226 aa9.79□□□□□ -0.84
PVT1-213ENST00000522414 EXOC6BQ9Y2D4 811 aa9.79□□□□□ -0.84
PVT1-213ENST00000522414 SLC45A1Q9Y2W3 748 aa9.79□□□□□ -0.84
PVT1-213ENST00000522414 FOCADQ5VW36 1801 aa9.79□□□□□ -0.84
PVT1-213ENST00000522414 USP17L5A8MUK1 530 aa9.78□□□□□ -0.84
PVT1-213ENST00000522414 TNPO2O14787 897 aaKnown RBP9.78□□□□□ -0.84
PVT1-213ENST00000522414 IDH1O75874 414 aaKnown RBP9.78□□□□□ -0.84
PVT1-213ENST00000522414 GJB1P08034 283 aa9.78□□□□□ -0.84
PVT1-213ENST00000522414 CEP85Q6P2H3 762 aa9.78□□□□□ -0.84
PVT1-213ENST00000522414 MIGA1Q8NAN2 632 aa9.78□□□□□ -0.84
PVT1-213ENST00000522414 DPF3Q92784 378 aa9.78□□□□□ -0.84
PVT1-213ENST00000522414 NUCKS1Q9H1E3 243 aaKnown RBP9.78□□□□□ -0.84
PVT1-213ENST00000522414 ASCC2Q9H1I8 757 aaPredicted RBP9.78□□□□□ -0.84
PVT1-213ENST00000522414 DNAJC18Q9H819 358 aa9.78□□□□□ -0.84
PVT1-213ENST00000522414 DOCK1Q14185 1865 aa9.78□□□□□ -0.84
PVT1-213ENST00000522414 DOCK3Q8IZD9 2030 aa9.77□□□□□ -0.85
PVT1-213ENST00000522414 CDK5RAP2Q96SN8 1893 aa9.77□□□□□ -0.85
PVT1-213ENST00000522414 TRIOBPQ9H2D6 2365 aa9.77□□□□□ -0.85
PVT1-213ENST00000522414 APBB1O00213 710 aa9.77□□□□□ -0.85
PVT1-213ENST00000522414 GJA8P48165 433 aa9.77□□□□□ -0.85
PVT1-213ENST00000522414 ERVK-9P63128 1117 aa9.77□□□□□ -0.85
PVT1-213ENST00000522414 METTL16Q86W50 562 aaKnown RBP9.77□□□□□ -0.85
PVT1-213ENST00000522414 CRACR2BQ8N4Y2 399 aaPredicted RBP9.77□□□□□ -0.85
PVT1-213ENST00000522414 MAGEB6Q8N7X4 407 aa9.77□□□□□ -0.85
PVT1-213ENST00000522414 P2RX7Q99572 595 aaKnown RBP9.77□□□□□ -0.85
PVT1-213ENST00000522414 TRIM34Q9BYJ4 488 aa9.77□□□□□ -0.85
PVT1-213ENST00000522414 DHX36Q9H2U1 1008 aaKnown RBP9.77□□□□□ -0.85
PVT1-213ENST00000522414 IL1RAPL2Q9NP60 686 aa9.77□□□□□ -0.85
PVT1-213ENST00000522414 HERC5Q9UII4 1024 aaKnown RBP9.77□□□□□ -0.85
PVT1-213ENST00000522414 GJD2Q9UKL4 321 aa9.77□□□□□ -0.85
PVT1-213ENST00000522414 FLT1P17948 1338 aa9.77□□□□□ -0.85
PVT1-213ENST00000522414 SIPA1L1O43166 1804 aa9.77□□□□□ -0.85
PVT1-213ENST00000522414 LOC285556D6RIA3 1793 aa9.76□□□□□ -0.85
PVT1-213ENST00000522414 SPATA31C2B4DYI2 1134 aa9.76□□□□□ -0.85
PVT1-213ENST00000522414 IGSF3O75054 1194 aa9.76□□□□□ -0.85
PVT1-213ENST00000522414 SGPL1O95470 568 aa9.76□□□□□ -0.85
PVT1-213ENST00000522414 TFRCP02786 760 aaKnown RBP9.76□□□□□ -0.85
PVT1-213ENST00000522414 INHAP05111 366 aa9.76□□□□□ -0.85
PVT1-213ENST00000522414 BACE1P56817 501 aa9.76□□□□□ -0.85
PVT1-213ENST00000522414 UBXN2AP68543 259 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms