RNA–Protein interactions for RNA: ENST00000522403.6

ARFGAP1-215, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 5

Gene ARFGAP1, Length 995 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-215	ENST00000522403	ZNF236	Q9UL36	1845 aa		18.85	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	KIAA0100	Q14667	2235 aa	Known RBP	18.85	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	PLXNA1	Q9UIW2	1896 aa		18.84	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	POTEF	A5A3E0	1075 aa		18.84	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	FCER1A	P12319	257 aa		18.84	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	ALAS1	P13196	640 aa		18.84	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	EXOSC10	Q01780	885 aa	Known RBP	18.84	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	GRM4	Q14833	912 aa		18.84	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	MUM1L1	Q5H9M0	696 aa		18.84	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	GPATCH4	Q5T3I0	446 aa	Known RBP	18.84	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	NFXL1	Q6ZNB6	911 aa		18.84	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	NBPF11	Q86T75	865 aa		18.84	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	ADGRF4	Q8IZF3	695 aa		18.84	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	PXYLP1	Q8TE99	480 aa		18.84	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	NUP133	Q8WUM0	1156 aa		18.84	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	TMEM87B	Q96K49	555 aa		18.84	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	APBA2	Q99767	749 aa		18.84	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	UNC93B1	Q9H1C4	597 aa		18.84	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	RNF146	Q9NTX7	359 aa		18.84	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	GTF3C3	Q9Y5Q9	886 aa		18.84	■□□□□ 0.61
ARFGAP1-215	ENST00000522403	MYH6	P13533	1939 aa		18.83	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	OAZ1	P54368	228 aa		18.83	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	TROAP	Q12815	778 aa		18.83	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	ASPRV1	Q53RT3	343 aa		18.83	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	DHX32	Q7L7V1	743 aa	Known RBP	18.83	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	DPP9	Q86TI2	863 aa		18.83	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	CCDC144CP	Q8IYA2	1237 aa		18.83	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	ZNF654	Q8IZM8	581 aa		18.83	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	CCPG1	Q9ULG6	757 aa		18.83	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	PALM3	A6NDB9	673 aa	Predicted RBP	18.82	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	KLRF2	D3W0D1	207 aa		18.82	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	STRN	O43815	780 aa		18.82	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	DHX16	O60231	1041 aa	Known RBP	18.82	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	FDX1	P10109	184 aa		18.82	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	XRCC5	P13010	732 aa	Known RBP	18.82	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	CCL5	P13501	91 aa		18.82	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	KRT32	Q14532	448 aa		18.82	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	KCTD2	Q14681	263 aa		18.82	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	CATIP	Q7Z7H3	387 aa		18.82	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	TRERF1	Q96PN7	1200 aa		18.82	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	JMJD4	Q9H9V9	463 aa		18.82	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	CCDC69	A6NI79	296 aa		18.81	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	HMGCR	P04035	888 aa		18.81	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	ICAM1	P05362	532 aa		18.81	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	CYP2C19	P33261	490 aa		18.81	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	CDC37	Q16543	378 aa	Predicted RBP	18.81	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	BRPF3	Q9ULD4	1205 aa		18.81	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	HOXC6	P09630	235 aa		18.8	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	COPB2	P35606	906 aa		18.8	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	UBXN2A	P68543	259 aa		18.8	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	QRICH1	Q2TAL8	776 aa		18.8	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	USH1G	Q495M9	461 aa		18.8	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	BLOC1S2	Q6QNY1	142 aa		18.8	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	ABRA	Q8N0Z2	381 aa		18.8	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	CMTR1	Q8N1G2	835 aa	Known RBP	18.8	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	CHST13	Q8NET6	341 aa		18.8	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	PIBF1	Q8WXW3	757 aa		18.8	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	DDX11	Q96FC9	970 aa		18.8	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	PURB	Q96QR8	312 aa	Known RBP	18.8	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	MTA3	Q9BTC8	594 aa		18.8	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	RNF208	Q9H0X6	261 aa		18.8	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	LCT	P09848	1927 aa		18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	NFIB	O00712	420 aa		18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	CYTH3	O43739	400 aa		18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	PLEKHA8P1	O95397	391 aa		18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	PRKAR2A	P13861	404 aa	Known RBP	18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	EN2	P19622	333 aa	Predicted RBP	18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	CAST	P20810	708 aa	Known RBP	18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	LIFR	P42702	1097 aa		18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	CNTN2	Q02246	1040 aa		18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	CACNB2	Q08289	660 aa	Predicted RBP	18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	ZNF792	Q3KQV3	632 aa		18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	C8orf34	Q49A92	452 aa		18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	ANKRD35	Q8N283	1001 aa		18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	MAML3	Q96JK9	1138 aa		18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	FGD4	Q96M96	766 aa		18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	ACAD9	Q9H845	621 aa		18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	A1CF	Q9NQ94	594 aa	Known RBP	18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	DDX49	Q9Y6V7	483 aa	Known RBP	18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	CENPF	P49454	3210 aa		18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	MCM3AP	O60318	1980 aa		18.79	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	PPP1R11	O60927	126 aa	Predicted RBP	18.78	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	DDAH1	O94760	285 aa		18.78	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	RPS6KB1	P23443	525 aa		18.78	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	CCND3	P30281	292 aa	Predicted RBP	18.78	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	PRAMEF19	Q5SWL8	479 aa		18.78	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	NSMF	Q6X4W1	530 aa		18.78	■□□□□ 0.6
ARFGAP1-215	ENST00000522403		Q6ZUG5	572 aa		18.78	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	MICU3	Q86XE3	530 aa		18.78	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	HOMER1	Q86YM7	354 aa		18.78	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	TRPV1	Q8NER1	839 aa		18.78	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	CLEC4D	Q8WXI8	215 aa		18.78	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	TMEM106C	Q9BVX2	250 aa		18.78	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	RBBP6	Q7Z6E9	1792 aa	Known RBP	18.78	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	WDR19	Q8NEZ3	1342 aa		18.77	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	DNAJC25-GNG10	A0A024R161	153 aa		18.77	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	EPB41L2	O43491	1005 aa	Known RBP	18.77	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	IGHA2	P01877	340 aa		18.77	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	APOBR	Q0VD83	1088 aa		18.77	■□□□□ 0.6
ARFGAP1-215	ENST00000522403	TKFC	Q3LXA3	575 aa		18.77	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms