RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 TKFCQ3LXA3 575 aa21.8■■□□□ 1.08
TOP1MT-216ENST00000522121 DCAF4Q8WV16 495 aa21.8■■□□□ 1.08
TOP1MT-216ENST00000522121 FERMT2Q96AC1 680 aa21.8■■□□□ 1.08
TOP1MT-216ENST00000522121 ZHX1Q9UKY1 873 aaPredicted RBP21.8■■□□□ 1.08
TOP1MT-216ENST00000522121 SOX1O00570 391 aaPredicted RBP21.79■■□□□ 1.08
TOP1MT-216ENST00000522121 SNAI1O95863 264 aaPredicted RBP21.79■■□□□ 1.08
TOP1MT-216ENST00000522121 PGK1P00558 417 aa21.79■■□□□ 1.08
TOP1MT-216ENST00000522121 PCP11498 1178 aaKnown RBP21.79■■□□□ 1.08
TOP1MT-216ENST00000522121 NOVP48745 357 aa21.79■■□□□ 1.08
TOP1MT-216ENST00000522121 CCDC96Q2M329 555 aa21.79■■□□□ 1.08
TOP1MT-216ENST00000522121 MFSD6Q6ZSS7 791 aa21.79■■□□□ 1.08
TOP1MT-216ENST00000522121 AGBL1Q96MI9 1066 aa21.79■■□□□ 1.08
TOP1MT-216ENST00000522121 DIAPH3Q9NSV4 1193 aa21.79■■□□□ 1.08
TOP1MT-216ENST00000522121 TCP11L1Q9NUJ3 509 aa21.79■■□□□ 1.08
TOP1MT-216ENST00000522121 PHF24Q9UPV7 400 aa21.79■■□□□ 1.08
TOP1MT-216ENST00000522121 PLXNA1Q9UIW2 1896 aa21.78■■□□□ 1.08
TOP1MT-216ENST00000522121 HIP1O00291 1037 aa21.78■■□□□ 1.08
TOP1MT-216ENST00000522121 TOP1P11387 765 aaKnown RBP21.78■■□□□ 1.08
TOP1MT-216ENST00000522121 HAND2P61296 217 aa21.78■■□□□ 1.08
TOP1MT-216ENST00000522121 ABHD16BQ9H3Z7 469 aa21.78■■□□□ 1.08
TOP1MT-216ENST00000522121 RNF41Q9H4P4 317 aaPredicted RBP21.78■■□□□ 1.08
TOP1MT-216ENST00000522121 RNF146Q9NTX7 359 aa21.78■■□□□ 1.08
TOP1MT-216ENST00000522121 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.78■■□□□ 1.08
TOP1MT-216ENST00000522121 PRR12Q9ULL5 1215 aa21.78■■□□□ 1.08
TOP1MT-216ENST00000522121 ZNF536O15090 1300 aa21.78■■□□□ 1.08
TOP1MT-216ENST00000522121 POTEB2H3BUK9 544 aa21.77■■□□□ 1.08
TOP1MT-216ENST00000522121 ALAS1P13196 640 aa21.77■■□□□ 1.08
TOP1MT-216ENST00000522121 ACVR2BQ13705 512 aa21.77■■□□□ 1.08
TOP1MT-216ENST00000522121 SNX17Q15036 470 aa21.77■■□□□ 1.08
TOP1MT-216ENST00000522121 LRIT3Q3SXY7 679 aa21.77■■□□□ 1.08
TOP1MT-216ENST00000522121 TRIM60Q495X7 471 aa21.77■■□□□ 1.08
TOP1MT-216ENST00000522121 AKNAD1Q5T1N1 836 aa21.77■■□□□ 1.08
TOP1MT-216ENST00000522121 C1orf53Q5VUE5 145 aa21.77■■□□□ 1.08
TOP1MT-216ENST00000522121 CCDC174Q6PII3 467 aa21.77■■□□□ 1.08
TOP1MT-216ENST00000522121 LRCH3Q96II8 777 aa21.77■■□□□ 1.08
TOP1MT-216ENST00000522121 TRERF1Q96PN7 1200 aa21.77■■□□□ 1.08
TOP1MT-216ENST00000522121 CWC27Q6UX04 472 aaKnown RBP21.76■■□□□ 1.07
TOP1MT-216ENST00000522121 ARMCX2Q7L311 632 aa21.76■■□□□ 1.07
TOP1MT-216ENST00000522121 LENG1Q96BZ8 264 aaPredicted RBP21.76■■□□□ 1.07
TOP1MT-216ENST00000522121 TMEM47Q9BQJ4 181 aa21.76■■□□□ 1.07
TOP1MT-216ENST00000522121 TSEN34Q9BSV6 310 aaKnown RBP21.76■■□□□ 1.07
TOP1MT-216ENST00000522121 A1CFQ9NQ94 594 aaKnown RBP21.76■■□□□ 1.07
TOP1MT-216ENST00000522121 PRDM5Q9NQX1 630 aaPredicted RBP21.76■■□□□ 1.07
TOP1MT-216ENST00000522121 SUPT16HQ9Y5B9 1047 aaKnown RBP21.76■■□□□ 1.07
TOP1MT-216ENST00000522121 ZNF213O14771 459 aa21.75■■□□□ 1.07
TOP1MT-216ENST00000522121 ADAMTS4O75173 837 aa21.75■■□□□ 1.07
TOP1MT-216ENST00000522121 DUSP11O75319 330 aaKnown RBP21.75■■□□□ 1.07
TOP1MT-216ENST00000522121 RASGRP2Q7LDG7 609 aa21.75■■□□□ 1.07
TOP1MT-216ENST00000522121 TTC14Q96N46 770 aa21.75■■□□□ 1.07
TOP1MT-216ENST00000522121 SPC25Q9HBM1 224 aa21.75■■□□□ 1.07
TOP1MT-216ENST00000522121 CCPG1Q9ULG6 757 aa21.75■■□□□ 1.07
TOP1MT-216ENST00000522121 SYNRGQ9UMZ2 1314 aa21.75■■□□□ 1.07
TOP1MT-216ENST00000522121 A0A1W2PQ45 241 aaPredicted RBP21.74■■□□□ 1.07
TOP1MT-216ENST00000522121 A0A1W2PQY0 241 aa21.74■■□□□ 1.07
TOP1MT-216ENST00000522121 ASB14A6NK59 587 aa21.74■■□□□ 1.07
TOP1MT-216ENST00000522121 SNAP25P60880 206 aa21.74■■□□□ 1.07
TOP1MT-216ENST00000522121 CNTN2Q02246 1040 aa21.74■■□□□ 1.07
TOP1MT-216ENST00000522121 GPR153Q6NV75 609 aa21.74■■□□□ 1.07
TOP1MT-216ENST00000522121 CCDC144CPQ8IYA2 1237 aa21.74■■□□□ 1.07
TOP1MT-216ENST00000522121 FAM133AQ8N9E0 248 aa21.74■■□□□ 1.07
TOP1MT-216ENST00000522121 NUP133Q8WUM0 1156 aa21.74■■□□□ 1.07
TOP1MT-216ENST00000522121 ESR2Q92731 530 aa21.74■■□□□ 1.07
TOP1MT-216ENST00000522121 FGD4Q96M96 766 aa21.74■■□□□ 1.07
TOP1MT-216ENST00000522121 MOXD2PA6NHM9 499 aa21.73■■□□□ 1.07
TOP1MT-216ENST00000522121 ICAM1P05362 532 aa21.73■■□□□ 1.07
TOP1MT-216ENST00000522121 NT5C2P49902 561 aa21.73■■□□□ 1.07
TOP1MT-216ENST00000522121 CCDC144BQ3MJ40 725 aa21.73■■□□□ 1.07
TOP1MT-216ENST00000522121 SYDE2Q5VT97 1194 aa21.73■■□□□ 1.07
TOP1MT-216ENST00000522121 BTNL9Q6UXG8 535 aa21.73■■□□□ 1.07
TOP1MT-216ENST00000522121 TBC1D10CQ8IV04 446 aa21.73■■□□□ 1.07
TOP1MT-216ENST00000522121 DNAH12Q6ZR08 3092 aa21.73■■□□□ 1.07
TOP1MT-216ENST00000522121 SLC16A2P36021 539 aa21.72■■□□□ 1.07
TOP1MT-216ENST00000522121 ACLYP53396 1101 aa21.72■■□□□ 1.07
TOP1MT-216ENST00000522121 TLE2Q04725 743 aa21.72■■□□□ 1.07
TOP1MT-216ENST00000522121 TTBK2Q6IQ55 1244 aa21.72■■□□□ 1.07
TOP1MT-216ENST00000522121 RANBP17Q9H2T7 1088 aaKnown RBP21.72■■□□□ 1.07
TOP1MT-216ENST00000522121 GPCPD1Q9NPB8 672 aa21.72■■□□□ 1.07
TOP1MT-216ENST00000522121 PDLIM7Q9NR12 457 aa21.72■■□□□ 1.07
TOP1MT-216ENST00000522121 FRMPD2Q68DX3 1309 aaPredicted RBP21.72■■□□□ 1.07
TOP1MT-216ENST00000522121 C6orf222P0C671 652 aaPredicted RBP21.71■■□□□ 1.07
TOP1MT-216ENST00000522121 KCNA10Q16322 511 aa21.71■■□□□ 1.07
TOP1MT-216ENST00000522121 CCDC178Q5BJE1 867 aa21.71■■□□□ 1.07
TOP1MT-216ENST00000522121 MUM1L1Q5H9M0 696 aa21.71■■□□□ 1.07
TOP1MT-216ENST00000522121 NSMFQ6X4W1 530 aa21.71■■□□□ 1.07
TOP1MT-216ENST00000522121 PCSK9Q8NBP7 692 aaKnown RBP21.71■■□□□ 1.07
TOP1MT-216ENST00000522121 KLHDC9Q8NEP7 349 aa21.71■■□□□ 1.07
TOP1MT-216ENST00000522121 STARD7Q9NQZ5 370 aa21.71■■□□□ 1.07
TOP1MT-216ENST00000522121 CYP39A1Q9NYL5 469 aa21.71■■□□□ 1.07
TOP1MT-216ENST00000522121 PNMA2Q9UL42 364 aa21.71■■□□□ 1.07
TOP1MT-216ENST00000522121 SMCHD1A6NHR9 2005 aa21.7■■□□□ 1.06
TOP1MT-216ENST00000522121 SOWAHBA6NEL2 793 aa21.7■■□□□ 1.06
TOP1MT-216ENST00000522121 PDHBP11177 359 aa21.7■■□□□ 1.06
TOP1MT-216ENST00000522121 CST5P28325 142 aaPredicted RBP21.7■■□□□ 1.06
TOP1MT-216ENST00000522121 IQCA1Q86XH1 822 aa21.7■■□□□ 1.06
TOP1MT-216ENST00000522121 DSCC1Q9BVC3 393 aa21.7■■□□□ 1.06
TOP1MT-216ENST00000522121 CTNNA3Q9UI47 895 aa21.7■■□□□ 1.06
TOP1MT-216ENST00000522121 NEDD4P46934 1319 aa21.7■■□□□ 1.06
TOP1MT-216ENST00000522121 PQBP1O60828 265 aaKnown RBP21.69■■□□□ 1.06
TOP1MT-216ENST00000522121 CLTBP09497 229 aa21.69■■□□□ 1.06
TOP1MT-216ENST00000522121 GJA9P57773 515 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms