RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 TINF2Q9BSI4 451 aa21.01■□□□□ 0.95
TRAPPC9-211ENST00000521700 HOMER2Q9NSB8 354 aa21.01■□□□□ 0.95
TRAPPC9-211ENST00000521700 U3KPZ7 1027 aaPredicted RBP21.01■□□□□ 0.95
TRAPPC9-211ENST00000521700 MSCO60682 206 aa21■□□□□ 0.95
TRAPPC9-211ENST00000521700 ZNF543Q08ER8 600 aa21■□□□□ 0.95
TRAPPC9-211ENST00000521700 SYDE2Q5VT97 1194 aa21■□□□□ 0.95
TRAPPC9-211ENST00000521700 ANKRD35Q8N283 1001 aa21■□□□□ 0.95
TRAPPC9-211ENST00000521700 ENAHQ8N8S7 591 aaPredicted RBP21■□□□□ 0.95
TRAPPC9-211ENST00000521700 RANBP17Q9H2T7 1088 aaKnown RBP21■□□□□ 0.95
TRAPPC9-211ENST00000521700 SEPT4O43236 478 aa20.99■□□□□ 0.95
TRAPPC9-211ENST00000521700 TKFCQ3LXA3 575 aa20.99■□□□□ 0.95
TRAPPC9-211ENST00000521700 MAP4K1Q92918 833 aa20.99■□□□□ 0.95
TRAPPC9-211ENST00000521700 TRERF1Q96PN7 1200 aa20.99■□□□□ 0.95
TRAPPC9-211ENST00000521700 C11orf49Q9H6J7 331 aa20.99■□□□□ 0.95
TRAPPC9-211ENST00000521700 ACAD9Q9H845 621 aa20.99■□□□□ 0.95
TRAPPC9-211ENST00000521700 RNF146Q9NTX7 359 aa20.99■□□□□ 0.95
TRAPPC9-211ENST00000521700 TAF6LQ9Y6J9 622 aa20.99■□□□□ 0.95
TRAPPC9-211ENST00000521700 TNKSO95271 1327 aa20.99■□□□□ 0.95
TRAPPC9-211ENST00000521700 FRMPD3Q5JV73 1810 aa20.99■□□□□ 0.95
TRAPPC9-211ENST00000521700 H0YGN5 161 aa20.98■□□□□ 0.95
TRAPPC9-211ENST00000521700 ALAS1P13196 640 aa20.98■□□□□ 0.95
TRAPPC9-211ENST00000521700 BMP2KLQ5H9B9 411 aa20.98■□□□□ 0.95
TRAPPC9-211ENST00000521700 ANO1Q5XXA6 986 aa20.98■□□□□ 0.95
TRAPPC9-211ENST00000521700 CYB5R4Q7L1T6 521 aa20.98■□□□□ 0.95
TRAPPC9-211ENST00000521700 PNMA1Q8ND90 353 aa20.98■□□□□ 0.95
TRAPPC9-211ENST00000521700 KAT14Q9H8E8 782 aa20.98■□□□□ 0.95
TRAPPC9-211ENST00000521700 NRBP1Q9UHY1 535 aa20.98■□□□□ 0.95
TRAPPC9-211ENST00000521700 SMCHD1A6NHR9 2005 aa20.98■□□□□ 0.95
TRAPPC9-211ENST00000521700 ICAM1P05362 532 aa20.97■□□□□ 0.95
TRAPPC9-211ENST00000521700 COL6A1P12109 1028 aa20.97■□□□□ 0.95
TRAPPC9-211ENST00000521700 TAL1P17542 331 aaPredicted RBP20.97■□□□□ 0.95
TRAPPC9-211ENST00000521700 MAMDC4Q6UXC1 1216 aa20.97■□□□□ 0.95
TRAPPC9-211ENST00000521700 MSL3Q8N5Y2 521 aaKnown RBP20.97■□□□□ 0.95
TRAPPC9-211ENST00000521700 CCDC136Q96JN2 1154 aa20.97■□□□□ 0.95
TRAPPC9-211ENST00000521700 FGD4Q96M96 766 aa20.97■□□□□ 0.95
TRAPPC9-211ENST00000521700 UBAC1Q9BSL1 405 aa20.97■□□□□ 0.95
TRAPPC9-211ENST00000521700 CCPG1Q9ULG6 757 aa20.97■□□□□ 0.95
TRAPPC9-211ENST00000521700 GOLGA8HP0CJ92 632 aa20.96■□□□□ 0.95
TRAPPC9-211ENST00000521700 TRDNQ13061 729 aa20.96■□□□□ 0.95
TRAPPC9-211ENST00000521700 MUM1L1Q5H9M0 696 aa20.96■□□□□ 0.95
TRAPPC9-211ENST00000521700 GPATCH4Q5T3I0 446 aaKnown RBP20.96■□□□□ 0.95
TRAPPC9-211ENST00000521700 ZNF467Q7Z7K2 595 aaPredicted RBP20.96■□□□□ 0.95
TRAPPC9-211ENST00000521700 ESYT1Q9BSJ8 1104 aa20.96■□□□□ 0.95
TRAPPC9-211ENST00000521700 A1CFQ9NQ94 594 aaKnown RBP20.96■□□□□ 0.95
TRAPPC9-211ENST00000521700 RBM8AQ9Y5S9 174 aaKnown RBP20.96■□□□□ 0.95
TRAPPC9-211ENST00000521700 PFASO15067 1338 aa20.96■□□□□ 0.95
TRAPPC9-211ENST00000521700 ALPK3Q96L96 1907 aa20.96■□□□□ 0.95
TRAPPC9-211ENST00000521700 E7EWF7 191 aa20.95■□□□□ 0.94
TRAPPC9-211ENST00000521700 EVI5O60447 810 aa20.95■□□□□ 0.94
TRAPPC9-211ENST00000521700 SNAI1O95863 264 aaPredicted RBP20.95■□□□□ 0.94
TRAPPC9-211ENST00000521700 ZNF865P0CJ78 1059 aaPredicted RBP20.95■□□□□ 0.94
TRAPPC9-211ENST00000521700 CNTN2Q02246 1040 aa20.95■□□□□ 0.94
TRAPPC9-211ENST00000521700 SEC23AQ15436 765 aa20.95■□□□□ 0.94
TRAPPC9-211ENST00000521700 KIAA1211Q6ZU35 1233 aa20.95■□□□□ 0.94
TRAPPC9-211ENST00000521700 STOX1Q6ZVD7 989 aa20.95■□□□□ 0.94
TRAPPC9-211ENST00000521700 FAM133AQ8N9E0 248 aa20.95■□□□□ 0.94
TRAPPC9-211ENST00000521700 UBA5Q9GZZ9 404 aa20.95■□□□□ 0.94
TRAPPC9-211ENST00000521700 LSG1Q9H089 658 aaKnown RBP20.95■□□□□ 0.94
TRAPPC9-211ENST00000521700 CPVLQ9H3G5 476 aa20.95■□□□□ 0.94
TRAPPC9-211ENST00000521700 NR2E3Q9Y5X4 410 aa20.95■□□□□ 0.94
TRAPPC9-211ENST00000521700 SYNGAP1Q96PV0 1343 aa20.95■□□□□ 0.94
TRAPPC9-211ENST00000521700 CEP290O15078 2479 aa20.94■□□□□ 0.94
TRAPPC9-211ENST00000521700 POTEB2H3BUK9 544 aa20.94■□□□□ 0.94
TRAPPC9-211ENST00000521700 IFIT1BQ5T764 474 aaKnown RBP20.94■□□□□ 0.94
TRAPPC9-211ENST00000521700 CNPY2Q9Y2B0 182 aa20.94■□□□□ 0.94
TRAPPC9-211ENST00000521700 SOWAHBA6NEL2 793 aa20.93■□□□□ 0.94
TRAPPC9-211ENST00000521700 GJC2Q5T442 439 aaPredicted RBP20.93■□□□□ 0.94
TRAPPC9-211ENST00000521700 ARRDC4Q8NCT1 418 aa20.93■□□□□ 0.94
TRAPPC9-211ENST00000521700 NCOA7Q8NI08 942 aa20.93■□□□□ 0.94
TRAPPC9-211ENST00000521700 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.93■□□□□ 0.94
TRAPPC9-211ENST00000521700 CYP39A1Q9NYL5 469 aa20.93■□□□□ 0.94
TRAPPC9-211ENST00000521700 DNM1LO00429 736 aa20.92■□□□□ 0.94
TRAPPC9-211ENST00000521700 RALYLQ86SE5 291 aaKnown RBP20.92■□□□□ 0.94
TRAPPC9-211ENST00000521700 IFIT3O14879 490 aaKnown RBP20.91■□□□□ 0.94
TRAPPC9-211ENST00000521700 MCM3APO60318 1980 aa20.91■□□□□ 0.94
TRAPPC9-211ENST00000521700 PARP1P09874 1014 aaKnown RBP20.91■□□□□ 0.94
TRAPPC9-211ENST00000521700 ACVR2BQ13705 512 aa20.91■□□□□ 0.94
TRAPPC9-211ENST00000521700 ASPRV1Q53RT3 343 aa20.91■□□□□ 0.94
TRAPPC9-211ENST00000521700 NSMFQ6X4W1 530 aa20.91■□□□□ 0.94
TRAPPC9-211ENST00000521700 ARMCX2Q7L311 632 aa20.91■□□□□ 0.94
TRAPPC9-211ENST00000521700 CHST3Q7LGC8 479 aa20.91■□□□□ 0.94
TRAPPC9-211ENST00000521700 CCDC144CPQ8IYA2 1237 aa20.91■□□□□ 0.94
TRAPPC9-211ENST00000521700 SENP6Q9GZR1 1112 aaPredicted RBP20.91■□□□□ 0.94
TRAPPC9-211ENST00000521700 WDR19Q8NEZ3 1342 aa20.9■□□□□ 0.94
TRAPPC9-211ENST00000521700 NFIBO00712 420 aa20.9■□□□□ 0.94
TRAPPC9-211ENST00000521700 MYCNP04198 464 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC9-211ENST00000521700 NEFLP07196 543 aa20.9■□□□□ 0.94
TRAPPC9-211ENST00000521700 RARBP10826 455 aa20.9■□□□□ 0.94
TRAPPC9-211ENST00000521700 AKR1A1P14550 325 aa20.9■□□□□ 0.94
TRAPPC9-211ENST00000521700 LRRC41Q15345 812 aa20.9■□□□□ 0.94
TRAPPC9-211ENST00000521700 ADGRF4Q8IZF3 695 aa20.9■□□□□ 0.94
TRAPPC9-211ENST00000521700 CLEC4DQ8WXI8 215 aa20.9■□□□□ 0.94
TRAPPC9-211ENST00000521700 ABHD16BQ9H3Z7 469 aa20.9■□□□□ 0.94
TRAPPC9-211ENST00000521700 SENP2Q9HC62 589 aa20.9■□□□□ 0.94
TRAPPC9-211ENST00000521700 XPNPEP3Q9NQH7 507 aa20.9■□□□□ 0.94
TRAPPC9-211ENST00000521700 ZHX1Q9UKY1 873 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC9-211ENST00000521700 PNMA2Q9UL42 364 aa20.9■□□□□ 0.94
TRAPPC9-211ENST00000521700 FAM184BQ9ULE4 1060 aa20.9■□□□□ 0.94
TRAPPC9-211ENST00000521700 ASTN1O14525 1302 aa20.89■□□□□ 0.93
TRAPPC9-211ENST00000521700 ANTXR2P58335 489 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms