RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 ACVR2BQ13705 512 aa10.57□□□□□ -0.72
CTNNA1-229ENST00000521683 TKFCQ3LXA3 575 aa10.57□□□□□ -0.72
CTNNA1-229ENST00000521683 SLFN13Q68D06 897 aa10.57□□□□□ -0.72
CTNNA1-229ENST00000521683 CCSAPQ6IQ19 270 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1-229ENST00000521683 FAM160B2Q86V87 743 aa10.57□□□□□ -0.72
CTNNA1-229ENST00000521683 ANKRD35Q8N283 1001 aa10.57□□□□□ -0.72
CTNNA1-229ENST00000521683 SEC62Q99442 399 aaKnown RBP10.57□□□□□ -0.72
CTNNA1-229ENST00000521683 UPF3AQ9H1J1 476 aaKnown RBP10.57□□□□□ -0.72
CTNNA1-229ENST00000521683 STARD7Q9NQZ5 370 aa10.57□□□□□ -0.72
CTNNA1-229ENST00000521683 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1-229ENST00000521683 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.57□□□□□ -0.72
CTNNA1-229ENST00000521683 ELP1O95163 1332 aa10.57□□□□□ -0.72
CTNNA1-229ENST00000521683 MROH7Q68CQ1 1323 aa10.57□□□□□ -0.72
CTNNA1-229ENST00000521683 TMEM265A0A087WTH1 108 aa10.56□□□□□ -0.72
CTNNA1-229ENST00000521683 DCDC2CA8MYV0 355 aa10.56□□□□□ -0.72
CTNNA1-229ENST00000521683 TMEM232C9JQI7 657 aa10.56□□□□□ -0.72
CTNNA1-229ENST00000521683 PQBP1O60828 265 aaKnown RBP10.56□□□□□ -0.72
CTNNA1-229ENST00000521683 RAG1P15918 1043 aa10.56□□□□□ -0.72
CTNNA1-229ENST00000521683 ITGB8P26012 769 aa10.56□□□□□ -0.72
CTNNA1-229ENST00000521683 SLC1A4P43007 532 aa10.56□□□□□ -0.72
CTNNA1-229ENST00000521683 GJA9P57773 515 aa10.56□□□□□ -0.72
CTNNA1-229ENST00000521683 TFAP4Q01664 338 aa10.56□□□□□ -0.72
CTNNA1-229ENST00000521683 KCNA10Q16322 511 aa10.56□□□□□ -0.72
CTNNA1-229ENST00000521683 ARMCX2Q7L311 632 aa10.56□□□□□ -0.72
CTNNA1-229ENST00000521683 PCSK9Q8NBP7 692 aaKnown RBP10.56□□□□□ -0.72
CTNNA1-229ENST00000521683 OTUD7AQ8TE49 926 aaPredicted RBP10.56□□□□□ -0.72
CTNNA1-229ENST00000521683 CHURC1Q8WUH1 139 aa10.56□□□□□ -0.72
CTNNA1-229ENST00000521683 STAG1Q8WVM7 1258 aa10.56□□□□□ -0.72
CTNNA1-229ENST00000521683 ACAD9Q9H845 621 aa10.56□□□□□ -0.72
CTNNA1-229ENST00000521683 SPC25Q9HBM1 224 aa10.56□□□□□ -0.72
CTNNA1-229ENST00000521683 MCM3APO60318 1980 aa10.56□□□□□ -0.72
CTNNA1-229ENST00000521683 MYADML2A6NDP7 307 aa10.55□□□□□ -0.72
CTNNA1-229ENST00000521683 FOXP2O15409 715 aa10.55□□□□□ -0.72
CTNNA1-229ENST00000521683 SLC4A3P48751 1232 aa10.55□□□□□ -0.72
CTNNA1-229ENST00000521683 NKX3-2P78367 333 aa10.55□□□□□ -0.72
CTNNA1-229ENST00000521683 FPGSQ05932 587 aa10.55□□□□□ -0.72
CTNNA1-229ENST00000521683 FAAP100Q0VG06 881 aa10.55□□□□□ -0.72
CTNNA1-229ENST00000521683 TICAM2Q86XR7 235 aa10.55□□□□□ -0.72
CTNNA1-229ENST00000521683 FAM133AQ8N9E0 248 aa10.55□□□□□ -0.72
CTNNA1-229ENST00000521683 GLT1D1Q96MS3 346 aa10.55□□□□□ -0.72
CTNNA1-229ENST00000521683 KATNBL1Q9H079 304 aa10.55□□□□□ -0.72
CTNNA1-229ENST00000521683 TMEM39AQ9NV64 488 aa10.55□□□□□ -0.72
CTNNA1-229ENST00000521683 ANAPC4Q9UJX5 808 aa10.55□□□□□ -0.72
CTNNA1-229ENST00000521683 TBX21Q9UL17 535 aa10.55□□□□□ -0.72
CTNNA1-229ENST00000521683 ZNF536O15090 1300 aa10.55□□□□□ -0.72
CTNNA1-229ENST00000521683 TTC28Q96AY4 2481 aa10.55□□□□□ -0.72
CTNNA1-229ENST00000521683 A0A0U1RQG5 324 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 ASB14A6NK59 587 aa10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 TSPY2A6NKD2 308 aa10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 LRRC37A2A6NM11 1700 aa10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 ADCY6O43306 1168 aa10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 ORC4O43929 436 aa10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 ASGR1P07306 291 aa10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 C6orf222P0C671 652 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 NOVP48745 357 aa10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 CDK7P50613 346 aa10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 RRP1P56182 461 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 CNTN2Q02246 1040 aa10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 IKQ13123 557 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 ALX1Q15699 326 aa10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 CCDC144BQ3MJ40 725 aa10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 RCSD1Q6JBY9 416 aa10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 CCDC144CPQ8IYA2 1237 aa10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 EVI5LQ96CN4 794 aa10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 RNPC3Q96LT9 517 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 FAM161BQ96MY7 647 aa10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 SEMA6BQ9H3T3 888 aa10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 A1CFQ9NQ94 594 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 HOMER2Q9NSB8 354 aa10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 RNF146Q9NTX7 359 aa10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 ZBTB47Q9UFB7 747 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 ISY1Q9ULR0 285 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 STX8Q9UNK0 236 aa10.54□□□□□ -0.72
CTNNA1-229ENST00000521683 TIMP1P01033 207 aa10.53□□□□□ -0.72
CTNNA1-229ENST00000521683 FGRP09769 529 aa10.53□□□□□ -0.72
CTNNA1-229ENST00000521683 MCCP23508 829 aa10.53□□□□□ -0.72
CTNNA1-229ENST00000521683 EPHB4P54760 987 aa10.53□□□□□ -0.72
CTNNA1-229ENST00000521683 CTDSPL2Q05D32 466 aa10.53□□□□□ -0.72
CTNNA1-229ENST00000521683 CCDC129Q6ZRS4 1044 aa10.53□□□□□ -0.72
CTNNA1-229ENST00000521683 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.53□□□□□ -0.72
CTNNA1-229ENST00000521683 DCAF4Q8WV16 495 aa10.53□□□□□ -0.72
CTNNA1-229ENST00000521683 AGBL1Q96MI9 1066 aa10.53□□□□□ -0.72
CTNNA1-229ENST00000521683 TRERF1Q96PN7 1200 aa10.53□□□□□ -0.72
CTNNA1-229ENST00000521683 CDX2Q99626 313 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-229ENST00000521683 TTYH1Q9H313 450 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-229ENST00000521683 IL17RBQ9NRM6 502 aa10.53□□□□□ -0.72
CTNNA1-229ENST00000521683 HELLSQ9NRZ9 838 aa10.53□□□□□ -0.72
CTNNA1-229ENST00000521683 VCANP13611 3396 aa10.53□□□□□ -0.72
CTNNA1-229ENST00000521683 ZMYM6O95789 1325 aa10.53□□□□□ -0.72
CTNNA1-229ENST00000521683 SOWAHBA6NEL2 793 aa10.52□□□□□ -0.73
CTNNA1-229ENST00000521683 ARVCFO00192 962 aa10.52□□□□□ -0.73
CTNNA1-229ENST00000521683 CTAGE5O15320 804 aa10.52□□□□□ -0.73
CTNNA1-229ENST00000521683 TLR3O15455 904 aaKnown RBP10.52□□□□□ -0.73
CTNNA1-229ENST00000521683 CABYRO75952 493 aa10.52□□□□□ -0.73
CTNNA1-229ENST00000521683 ALAS1P13196 640 aa10.52□□□□□ -0.73
CTNNA1-229ENST00000521683 IRX5P78411 483 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-229ENST00000521683 PPIGQ13427 754 aaKnown RBP eCLIP10.52□□□□□ -0.73
CTNNA1-229ENST00000521683 HDAC1Q13547 482 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-229ENST00000521683 GNASQ5JWF2 1037 aa10.52□□□□□ -0.73
CTNNA1-229ENST00000521683 MFSD5Q6N075 450 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms