RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 ADD2P35612 726 aa12.75□□□□□ -0.37
MRPS28-208ENST00000521605 ZAP70P43403 619 aa12.75□□□□□ -0.37
MRPS28-208ENST00000521605 USP14P54578 494 aa12.75□□□□□ -0.37
MRPS28-208ENST00000521605 NAA16Q6N069 864 aaPredicted RBP12.75□□□□□ -0.37
MRPS28-208ENST00000521605 LBX2Q6XYB7 198 aa12.75□□□□□ -0.37
MRPS28-208ENST00000521605 ZNF365Q70YC5 407 aa12.75□□□□□ -0.37
MRPS28-208ENST00000521605 METTL16Q86W50 562 aaKnown RBP12.75□□□□□ -0.37
MRPS28-208ENST00000521605 NCAPG2Q86XI2 1143 aa12.75□□□□□ -0.37
MRPS28-208ENST00000521605 MAML3Q96JK9 1138 aa12.75□□□□□ -0.37
MRPS28-208ENST00000521605 SLC28A3Q9HAS3 691 aa12.75□□□□□ -0.37
MRPS28-208ENST00000521605 STARD7Q9NQZ5 370 aa12.75□□□□□ -0.37
MRPS28-208ENST00000521605 SLC5A4Q9NY91 659 aa12.75□□□□□ -0.37
MRPS28-208ENST00000521605 LIMCH1Q9UPQ0 1083 aa12.75□□□□□ -0.37
MRPS28-208ENST00000521605 MYH7P12883 1935 aa12.74□□□□□ -0.37
MRPS28-208ENST00000521605 CYP2E1P05181 493 aaPredicted RBP12.74□□□□□ -0.37
MRPS28-208ENST00000521605 PPIGQ13427 754 aaKnown RBP eCLIP12.74□□□□□ -0.37
MRPS28-208ENST00000521605 RAB30Q15771 203 aa12.74□□□□□ -0.37
MRPS28-208ENST00000521605 AAK1Q2M2I8 961 aa12.74□□□□□ -0.37
MRPS28-208ENST00000521605 MFSD5Q6N075 450 aa12.74□□□□□ -0.37
MRPS28-208ENST00000521605 CCDC174Q6PII3 467 aa12.74□□□□□ -0.37
MRPS28-208ENST00000521605 ANKRD33Q7Z3H0 272 aa12.74□□□□□ -0.37
MRPS28-208ENST00000521605 ADGRA1Q86SQ6 560 aa12.74□□□□□ -0.37
MRPS28-208ENST00000521605 CHMP4CQ96CF2 233 aa12.74□□□□□ -0.37
MRPS28-208ENST00000521605 PPP1R12CQ9BZL4 782 aa12.74□□□□□ -0.37
MRPS28-208ENST00000521605 TANGO6Q9C0B7 1094 aa12.74□□□□□ -0.37
MRPS28-208ENST00000521605 SPATC1LQ9H0A9 340 aa12.74□□□□□ -0.37
MRPS28-208ENST00000521605 KIAA1683Q9H0B3 1180 aa12.74□□□□□ -0.37
MRPS28-208ENST00000521605 YBX2Q9Y2T7 364 aaKnown RBP12.74□□□□□ -0.37
MRPS28-208ENST00000521605 CDK5RAP2Q96SN8 1893 aa12.74□□□□□ -0.37
MRPS28-208ENST00000521605 CHD7Q9P2D1 2997 aa12.73□□□□□ -0.37
MRPS28-208ENST00000521605 HSPD1P10809 573 aaKnown RBP12.73□□□□□ -0.37
MRPS28-208ENST00000521605 PLCG2P16885 1265 aa12.73□□□□□ -0.37
MRPS28-208ENST00000521605 TAL1P17542 331 aaPredicted RBP12.73□□□□□ -0.37
MRPS28-208ENST00000521605 ACLYP53396 1101 aa12.73□□□□□ -0.37
MRPS28-208ENST00000521605 ALX1Q15699 326 aa12.73□□□□□ -0.37
MRPS28-208ENST00000521605 RASIP1Q5U651 963 aa12.73□□□□□ -0.37
MRPS28-208ENST00000521605 TOX2Q96NM4 488 aa12.73□□□□□ -0.37
MRPS28-208ENST00000521605 TBX21Q9UL17 535 aa12.73□□□□□ -0.37
MRPS28-208ENST00000521605 GBF1Q92538 1859 aa12.72□□□□□ -0.37
MRPS28-208ENST00000521605 WDR19Q8NEZ3 1342 aa12.72□□□□□ -0.37
MRPS28-208ENST00000521605 MYO9BQ13459 2157 aa12.72□□□□□ -0.37
MRPS28-208ENST00000521605 TCRBV5S4A2TA0A5A2 114 aa12.72□□□□□ -0.37
MRPS28-208ENST00000521605 CASTP20810 708 aaKnown RBP12.72□□□□□ -0.37
MRPS28-208ENST00000521605 KCNA4P22459 653 aa12.72□□□□□ -0.37
MRPS28-208ENST00000521605 RPS6KB1P23443 525 aa12.72□□□□□ -0.37
MRPS28-208ENST00000521605 ABCB5Q2M3G0 1257 aa12.72□□□□□ -0.37
MRPS28-208ENST00000521605 PSRC1Q6PGN9 363 aaPredicted RBP12.72□□□□□ -0.37
MRPS28-208ENST00000521605 BLOC1S2Q6QNY1 142 aa12.72□□□□□ -0.37
MRPS28-208ENST00000521605 TMEM199Q8N511 208 aa12.72□□□□□ -0.37
MRPS28-208ENST00000521605 KHSRPQ92945 711 aaKnown RBP eCLIP12.72□□□□□ -0.374e-8■■■□□ 15.6
MRPS28-208ENST00000521605 OSBP2Q969R2 916 aa12.72□□□□□ -0.37
MRPS28-208ENST00000521605 JAKMIP1Q96N16 626 aaKnown RBP12.72□□□□□ -0.37
MRPS28-208ENST00000521605 GBP4Q96PP9 640 aa12.72□□□□□ -0.37
MRPS28-208ENST00000521605 UPF3BQ9BZI7 483 aaKnown RBP12.72□□□□□ -0.37
MRPS28-208ENST00000521605 PDRG1Q9NUG6 133 aa12.72□□□□□ -0.37
MRPS28-208ENST00000521605 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.72□□□□□ -0.37
MRPS28-208ENST00000521605 FOCADQ5VW36 1801 aa12.72□□□□□ -0.37
MRPS28-208ENST00000521605 DDX11L8A8MPP1 907 aa12.71□□□□□ -0.37
MRPS28-208ENST00000521605 ADAMTS4O75173 837 aa12.71□□□□□ -0.37
MRPS28-208ENST00000521605 PGK2P07205 417 aa12.71□□□□□ -0.37
MRPS28-208ENST00000521605 CYP21A2P08686 494 aa12.71□□□□□ -0.37
MRPS28-208ENST00000521605 PDE6AP16499 860 aa12.71□□□□□ -0.37
MRPS28-208ENST00000521605 GNAT2P19087 354 aa12.71□□□□□ -0.37
MRPS28-208ENST00000521605 RABGGTBP53611 331 aa12.71□□□□□ -0.37
MRPS28-208ENST00000521605 AK2P54819 239 aa12.71□□□□□ -0.37
MRPS28-208ENST00000521605 DYNLL1P63167 89 aaKnown RBP12.71□□□□□ -0.37
MRPS28-208ENST00000521605 COG2Q14746 738 aa12.71□□□□□ -0.37
MRPS28-208ENST00000521605 CERKLQ49MI3 558 aaPredicted RBP12.71□□□□□ -0.37
MRPS28-208ENST00000521605 PPP2R2DQ66LE6 453 aa12.71□□□□□ -0.37
MRPS28-208ENST00000521605 SHCBP1Q8NEM2 672 aa12.71□□□□□ -0.37
MRPS28-208ENST00000521605 NUP133Q8WUM0 1156 aa12.71□□□□□ -0.37
MRPS28-208ENST00000521605 SNX27Q96L92 541 aa12.71□□□□□ -0.37
MRPS28-208ENST00000521605 AGXT2Q9BYV1 514 aa12.71□□□□□ -0.37
MRPS28-208ENST00000521605 MROH8Q9H579 483 aa12.71□□□□□ -0.37
MRPS28-208ENST00000521605 C11orf16Q9NQ32 467 aa12.71□□□□□ -0.37
MRPS28-208ENST00000521605 SMCHD1A6NHR9 2005 aa12.71□□□□□ -0.38
MRPS28-208ENST00000521605 SYNRGQ9UMZ2 1314 aa12.7□□□□□ -0.38
MRPS28-208ENST00000521605 RFXAPO00287 272 aa12.7□□□□□ -0.38
MRPS28-208ENST00000521605 FCER1AP12319 257 aa12.7□□□□□ -0.38
MRPS28-208ENST00000521605 AKR1A1P14550 325 aa12.7□□□□□ -0.38
MRPS28-208ENST00000521605 MYOGP15173 224 aa12.7□□□□□ -0.38
MRPS28-208ENST00000521605 CYP2C18P33260 490 aa12.7□□□□□ -0.38
MRPS28-208ENST00000521605 NT5C2P49902 561 aa12.7□□□□□ -0.38
MRPS28-208ENST00000521605 PPP4CP60510 307 aa12.7□□□□□ -0.38
MRPS28-208ENST00000521605 SLC9C2Q5TAH2 1124 aa12.7□□□□□ -0.38
MRPS28-208ENST00000521605 TATDN1Q6P1N9 297 aa12.7□□□□□ -0.38
MRPS28-208ENST00000521605 VTI1AQ96AJ9 217 aa12.7□□□□□ -0.38
MRPS28-208ENST00000521605 NEK1Q96PY6 1258 aa12.7□□□□□ -0.38
MRPS28-208ENST00000521605 SEC62Q99442 399 aaKnown RBP12.7□□□□□ -0.38
MRPS28-208ENST00000521605 CABP5Q9NP86 173 aa12.7□□□□□ -0.38
MRPS28-208ENST00000521605 PIH1D3Q9NQM4 214 aaKnown RBP12.7□□□□□ -0.38
MRPS28-208ENST00000521605 HOXC10Q9NYD6 342 aa12.7□□□□□ -0.38
MRPS28-208ENST00000521605 A0A0G2JMZ2 1700 aa12.7□□□□□ -0.38
MRPS28-208ENST00000521605 LRRC37A2A6NM11 1700 aa12.7□□□□□ -0.38
MRPS28-208ENST00000521605 MYADML2A6NDP7 307 aa12.69□□□□□ -0.38
MRPS28-208ENST00000521605 M0R2C6 588 aa12.69□□□□□ -0.38
MRPS28-208ENST00000521605 GPAA1O43292 621 aa12.69□□□□□ -0.38
MRPS28-208ENST00000521605 MCM4P33991 863 aa12.69□□□□□ -0.38
MRPS28-208ENST00000521605 USP5P45974 858 aa12.69□□□□□ -0.38
MRPS28-208ENST00000521605 MRE11P49959 708 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms