RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 CYP2C8P10632 490 aa25.43■■□□□ 1.66
PTP4A3-204ENST00000521578 FDPSP14324 419 aaKnown RBP25.43■■□□□ 1.66
PTP4A3-204ENST00000521578 SLC16A2P36021 539 aa25.43■■□□□ 1.66
PTP4A3-204ENST00000521578 ASPRV1Q53RT3 343 aa25.43■■□□□ 1.66
PTP4A3-204ENST00000521578 FANCBQ8NB91 859 aa25.43■■□□□ 1.66
PTP4A3-204ENST00000521578 LEO1Q8WVC0 666 aaPredicted RBP25.43■■□□□ 1.66
PTP4A3-204ENST00000521578 CPVLQ9H3G5 476 aa25.43■■□□□ 1.66
PTP4A3-204ENST00000521578 GOLGA8AA7E2F4 631 aa25.43■■□□□ 1.66
PTP4A3-204ENST00000521578 OSBPP22059 807 aa25.43■■□□□ 1.66
PTP4A3-204ENST00000521578 GPATCH4Q5T3I0 446 aaKnown RBP25.43■■□□□ 1.66
PTP4A3-204ENST00000521578 RGS22Q8NE09 1264 aa25.43■■□□□ 1.66
PTP4A3-204ENST00000521578 SPATA32Q96LK8 384 aa25.43■■□□□ 1.66
PTP4A3-204ENST00000521578 P2RX7Q99572 595 aaKnown RBP25.43■■□□□ 1.66
PTP4A3-204ENST00000521578 FEM1BQ9UK73 627 aa25.43■■□□□ 1.66
PTP4A3-204ENST00000521578 SLC45A1Q9Y2W3 748 aa25.43■■□□□ 1.66
PTP4A3-204ENST00000521578 THSD7BQ9C0I4 1608 aa25.42■■□□□ 1.66
PTP4A3-204ENST00000521578 PALM3A6NDB9 673 aaPredicted RBP25.42■■□□□ 1.66
PTP4A3-204ENST00000521578 METAP2P50579 478 aaKnown RBP eCLIP25.42■■□□□ 1.66
PTP4A3-204ENST00000521578 STAT2P52630 851 aa25.42■■□□□ 1.66
PTP4A3-204ENST00000521578 ATL3Q6DD88 541 aa25.42■■□□□ 1.66
PTP4A3-204ENST00000521578 KIFC2Q96AC6 838 aa25.42■■□□□ 1.66
PTP4A3-204ENST00000521578 MAP3K14Q99558 947 aa25.42■■□□□ 1.66
PTP4A3-204ENST00000521578 UBA5Q9GZZ9 404 aa25.42■■□□□ 1.66
PTP4A3-204ENST00000521578 KLRF2D3W0D1 207 aa25.41■■□□□ 1.66
PTP4A3-204ENST00000521578 COG2Q14746 738 aa25.41■■□□□ 1.66
PTP4A3-204ENST00000521578 SLF1Q9BQI6 1058 aa25.41■■□□□ 1.66
PTP4A3-204ENST00000521578 TFIP11Q9UBB9 837 aaKnown RBP25.41■■□□□ 1.66
PTP4A3-204ENST00000521578 CFAP45Q9UL16 551 aa25.41■■□□□ 1.66
PTP4A3-204ENST00000521578 PNMA3Q9UL41 463 aa25.41■■□□□ 1.66
PTP4A3-204ENST00000521578 KIF5BP33176 963 aa25.4■■□□□ 1.66
PTP4A3-204ENST00000521578 RCAN1P53805 252 aa25.4■■□□□ 1.66
PTP4A3-204ENST00000521578 TAF1CQ15572 869 aaPredicted RBP25.4■■□□□ 1.66
PTP4A3-204ENST00000521578 RTN1Q16799 776 aa25.4■■□□□ 1.66
PTP4A3-204ENST00000521578 CHURC1Q8WUH1 139 aa25.4■■□□□ 1.66
PTP4A3-204ENST00000521578 RLFQ13129 1914 aa25.4■■□□□ 1.66
PTP4A3-204ENST00000521578 CDC27P30260 824 aa25.4■■□□□ 1.66
PTP4A3-204ENST00000521578 ADD1P35611 737 aaKnown RBP25.4■■□□□ 1.66
PTP4A3-204ENST00000521578 CMTR1Q8N1G2 835 aaKnown RBP25.4■■□□□ 1.66
PTP4A3-204ENST00000521578 SMCR8Q8TEV9 937 aaPredicted RBP25.4■■□□□ 1.66
PTP4A3-204ENST00000521578 ZCCHC17Q9NP64 241 aaKnown RBP25.4■■□□□ 1.66
PTP4A3-204ENST00000521578 PPP1R9AQ9ULJ8 1098 aa25.4■■□□□ 1.66
PTP4A3-204ENST00000521578 BAZ2BQ9UIF8 2168 aaKnown RBP25.39■■□□□ 1.66
PTP4A3-204ENST00000521578 PARP14Q460N5 1801 aa25.39■■□□□ 1.66
PTP4A3-204ENST00000521578 PLEKHA8P1O95397 391 aa25.39■■□□□ 1.65
PTP4A3-204ENST00000521578 DSG3P32926 999 aa25.39■■□□□ 1.65
PTP4A3-204ENST00000521578 HERVK_113P62684 666 aa25.39■■□□□ 1.65
PTP4A3-204ENST00000521578 FAM160B2Q86V87 743 aa25.39■■□□□ 1.65
PTP4A3-204ENST00000521578 PRPF38AQ8NAV1 312 aaKnown RBP25.39■■□□□ 1.65
PTP4A3-204ENST00000521578 ATG4CQ96DT6 458 aa25.39■■□□□ 1.65
PTP4A3-204ENST00000521578 PARK7Q99497 189 aaKnown RBP25.39■■□□□ 1.65
PTP4A3-204ENST00000521578 FAM217BQ9NTX9 383 aaPredicted RBP25.39■■□□□ 1.65
PTP4A3-204ENST00000521578 HOXC10Q9NYD6 342 aa25.39■■□□□ 1.65
PTP4A3-204ENST00000521578 SPDYE16A6NNV3 312 aaPredicted RBP25.38■■□□□ 1.65
PTP4A3-204ENST00000521578 PPP2R5BQ15173 497 aa25.38■■□□□ 1.65
PTP4A3-204ENST00000521578 SYDE2Q5VT97 1194 aa25.38■■□□□ 1.65
PTP4A3-204ENST00000521578 BTNL9Q6UXG8 535 aa25.38■■□□□ 1.65
PTP4A3-204ENST00000521578 NBPF11Q86T75 865 aa25.38■■□□□ 1.65
PTP4A3-204ENST00000521578 CCDC82Q8N4S0 544 aa25.38■■□□□ 1.65
PTP4A3-204ENST00000521578 VAT1LQ9HCJ6 419 aa25.38■■□□□ 1.65
PTP4A3-204ENST00000521578 PRR12Q9ULL5 1215 aa25.38■■□□□ 1.65
PTP4A3-204ENST00000521578 PLA2G6O60733 806 aa25.37■■□□□ 1.65
PTP4A3-204ENST00000521578 ALDH1A1P00352 501 aa25.37■■□□□ 1.65
PTP4A3-204ENST00000521578 RBM28Q9NW13 759 aaKnown RBP25.37■■□□□ 1.65
PTP4A3-204ENST00000521578 TRPA1O75762 1119 aa25.37■■□□□ 1.65
PTP4A3-204ENST00000521578 SNAP25P60880 206 aa25.37■■□□□ 1.65
PTP4A3-204ENST00000521578 CRHR2Q13324 411 aa25.37■■□□□ 1.65
PTP4A3-204ENST00000521578 CPLX2Q6PUV4 134 aaKnown RBP25.37■■□□□ 1.65
PTP4A3-204ENST00000521578 PDLIM2Q96JY6 352 aa25.37■■□□□ 1.65
PTP4A3-204ENST00000521578 RNF186Q9NXI6 227 aa25.37■■□□□ 1.65
PTP4A3-204ENST00000521578 PEX10O60683 326 aa25.36■■□□□ 1.65
PTP4A3-204ENST00000521578 GNAQP50148 359 aa25.36■■□□□ 1.65
PTP4A3-204ENST00000521578 SLC35G1Q2M3R5 365 aa25.36■■□□□ 1.65
PTP4A3-204ENST00000521578 POTEEQ6S8J3 1075 aa25.36■■□□□ 1.65
PTP4A3-204ENST00000521578 TMTC3Q6ZXV5 915 aa25.36■■□□□ 1.65
PTP4A3-204ENST00000521578 ADGRF4Q8IZF3 695 aa25.36■■□□□ 1.65
PTP4A3-204ENST00000521578 SRBD1Q8N5C6 995 aaKnown RBP25.36■■□□□ 1.65
PTP4A3-204ENST00000521578 ZFYVE28Q9HCC9 887 aa25.36■■□□□ 1.65
PTP4A3-204ENST00000521578 RCOR1Q9UKL0 485 aa25.36■■□□□ 1.65
PTP4A3-204ENST00000521578 NID2Q14112 1375 aa25.36■■□□□ 1.65
PTP4A3-204ENST00000521578 MYPNQ86TC9 1320 aa25.36■■□□□ 1.65
PTP4A3-204ENST00000521578 CCDC196A0A1B0GTZ2 297 aa25.35■■□□□ 1.65
PTP4A3-204ENST00000521578 CPLX1O14810 134 aa25.35■■□□□ 1.65
PTP4A3-204ENST00000521578 CA12O43570 354 aa25.35■■□□□ 1.65
PTP4A3-204ENST00000521578 MAP2K1Q02750 393 aaPredicted RBP25.35■■□□□ 1.65
PTP4A3-204ENST00000521578 ZNF396Q96N95 335 aaPredicted RBP25.35■■□□□ 1.65
PTP4A3-204ENST00000521578 PAGR1Q9BTK6 254 aa25.35■■□□□ 1.65
PTP4A3-204ENST00000521578 FUCA2Q9BTY2 467 aa25.35■■□□□ 1.65
PTP4A3-204ENST00000521578 ORC3Q9UBD5 711 aaPredicted RBP25.35■■□□□ 1.65
PTP4A3-204ENST00000521578 GOLGA6L4A6NEF3 574 aa25.34■■□□□ 1.65
PTP4A3-204ENST00000521578 VWA5AO00534 786 aa25.34■■□□□ 1.65
PTP4A3-204ENST00000521578 CYTH3O43739 400 aa25.34■■□□□ 1.65
PTP4A3-204ENST00000521578 UVSSAQ2YD98 709 aa25.34■■□□□ 1.65
PTP4A3-204ENST00000521578 PIBF1Q8WXW3 757 aa25.34■■□□□ 1.65
PTP4A3-204ENST00000521578 TRIM44Q96DX7 344 aaPredicted RBP25.34■■□□□ 1.65
PTP4A3-204ENST00000521578 PGBD1Q96JS3 809 aa25.34■■□□□ 1.65
PTP4A3-204ENST00000521578 LZTS2Q9BRK4 669 aa25.34■■□□□ 1.65
PTP4A3-204ENST00000521578 R3HDMLQ9H3Y0 253 aa25.34■■□□□ 1.65
PTP4A3-204ENST00000521578 RTN4Q9NQC3 1192 aaKnown RBP25.34■■□□□ 1.65
PTP4A3-204ENST00000521578 PPFIA3O75145 1194 aa25.34■■□□□ 1.65
PTP4A3-204ENST00000521578 CDKL5O76039 1030 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms