RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 ZNF444Q8N0Y2 327 aaPredicted RBP16.19■□□□□ 0.18
SPARC-203ENST00000521327 CHST13Q8NET6 341 aa16.19■□□□□ 0.18
SPARC-203ENST00000521327 GAS2L1Q99501 681 aaPredicted RBP16.19■□□□□ 0.18
SPARC-203ENST00000521327 LRRCC1Q9C099 1032 aa16.19■□□□□ 0.18
SPARC-203ENST00000521327 UPF3AQ9H1J1 476 aaKnown RBP16.19■□□□□ 0.18
SPARC-203ENST00000521327 PRDM12Q9H4Q4 367 aa16.19■□□□□ 0.18
SPARC-203ENST00000521327 HOMER2Q9NSB8 354 aa16.19■□□□□ 0.18
SPARC-203ENST00000521327 FBXO40Q9UH90 709 aa16.19■□□□□ 0.18
SPARC-203ENST00000521327 FEM1BQ9UK73 627 aa16.19■□□□□ 0.18
SPARC-203ENST00000521327 MUC3AQ02505 3323 aa16.18■□□□□ 0.18
SPARC-203ENST00000521327 IGKV6D-41A0A0C4DH26 115 aa16.18■□□□□ 0.18
SPARC-203ENST00000521327 TLR3O15455 904 aaKnown RBP16.18■□□□□ 0.18
SPARC-203ENST00000521327 BEX3Q00994 111 aa16.18■□□□□ 0.18
SPARC-203ENST00000521327 NOL8Q76FK4 1167 aaKnown RBP16.18■□□□□ 0.18
SPARC-203ENST00000521327 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.18■□□□□ 0.18
SPARC-203ENST00000521327 FAM126BQ8IXS8 530 aa16.18■□□□□ 0.18
SPARC-203ENST00000521327 OSBP2Q969R2 916 aa16.18■□□□□ 0.18
SPARC-203ENST00000521327 MKL1Q969V6 931 aa16.18■□□□□ 0.18
SPARC-203ENST00000521327 CEP95Q96GE4 821 aa16.18■□□□□ 0.18
SPARC-203ENST00000521327 ECHDC1Q9NTX5 307 aa16.18■□□□□ 0.18
SPARC-203ENST00000521327 MTMR4Q9NYA4 1195 aa16.18■□□□□ 0.18
SPARC-203ENST00000521327 TNFRSF10AO00220 468 aa16.17■□□□□ 0.18
SPARC-203ENST00000521327 CTAGE5O15320 804 aa16.17■□□□□ 0.18
SPARC-203ENST00000521327 APPP05067 770 aa16.17■□□□□ 0.18
SPARC-203ENST00000521327 CYP2C18P33260 490 aa16.17■□□□□ 0.18
SPARC-203ENST00000521327 OAZ1P54368 228 aa16.17■□□□□ 0.18
SPARC-203ENST00000521327 CNTN2Q02246 1040 aa16.17■□□□□ 0.18
SPARC-203ENST00000521327 PSRC1Q6PGN9 363 aaPredicted RBP16.17■□□□□ 0.18
SPARC-203ENST00000521327 LRRC47Q8N1G4 583 aaKnown RBP16.17■□□□□ 0.18
SPARC-203ENST00000521327 CHMP4BQ9H444 224 aaKnown RBP16.17■□□□□ 0.18
SPARC-203ENST00000521327 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.16■□□□□ 0.18
SPARC-203ENST00000521327 TTLL1O95922 423 aa16.16■□□□□ 0.18
SPARC-203ENST00000521327 BMP3P12645 472 aa16.16■□□□□ 0.18
SPARC-203ENST00000521327 TDO2P48775 406 aa16.16■□□□□ 0.18
SPARC-203ENST00000521327 TNFAIP2Q03169 654 aa16.16■□□□□ 0.18
SPARC-203ENST00000521327 SLFN13Q68D06 897 aa16.16■□□□□ 0.18
SPARC-203ENST00000521327 CXCL17Q6UXB2 119 aa16.16■□□□□ 0.18
SPARC-203ENST00000521327 KBTBD3Q8NAB2 608 aa16.16■□□□□ 0.18
SPARC-203ENST00000521327 APPBP2Q92624 585 aa16.16■□□□□ 0.18
SPARC-203ENST00000521327 KATNBL1Q9H079 304 aa16.16■□□□□ 0.18
SPARC-203ENST00000521327 ZNF287Q9HBT7 754 aa16.16■□□□□ 0.18
SPARC-203ENST00000521327 EPB41L4AQ9HCS5 686 aaPredicted RBP16.16■□□□□ 0.18
SPARC-203ENST00000521327 IL23AQ9NPF7 189 aa16.16■□□□□ 0.18
SPARC-203ENST00000521327 CXXC1Q9P0U4 656 aaPredicted RBP16.16■□□□□ 0.18
SPARC-203ENST00000521327 MSRAQ9UJ68 235 aa16.16■□□□□ 0.18
SPARC-203ENST00000521327 ISY1Q9ULR0 285 aaKnown RBP16.16■□□□□ 0.18
SPARC-203ENST00000521327 TMEM232C9JQI7 657 aa16.15■□□□□ 0.18
SPARC-203ENST00000521327 RNF113AO15541 343 aaKnown RBP16.15■□□□□ 0.18
SPARC-203ENST00000521327 GPAA1O43292 621 aa16.15■□□□□ 0.18
SPARC-203ENST00000521327 CD4P01730 458 aa16.15■□□□□ 0.18
SPARC-203ENST00000521327 FGBP02675 491 aa16.15■□□□□ 0.18
SPARC-203ENST00000521327 IGFBP4P22692 258 aa16.15■□□□□ 0.18
SPARC-203ENST00000521327 CCDC85BQ15834 202 aaPredicted RBP16.15■□□□□ 0.18
SPARC-203ENST00000521327 AKNAD1Q5T1N1 836 aa16.15■□□□□ 0.18
SPARC-203ENST00000521327 MIER1Q8N108 512 aa16.15■□□□□ 0.18
SPARC-203ENST00000521327 FAM133AQ8N9E0 248 aa16.15■□□□□ 0.18
SPARC-203ENST00000521327 GMCL1P1Q8NEA9 526 aa16.15■□□□□ 0.18
SPARC-203ENST00000521327 ATXN2LQ8WWM7 1075 aaKnown RBP16.15■□□□□ 0.18
SPARC-203ENST00000521327 CHMP4CQ96CF2 233 aa16.15■□□□□ 0.18
SPARC-203ENST00000521327 ACAD9Q9H845 621 aa16.15■□□□□ 0.18
SPARC-203ENST00000521327 ZNFX1Q9P2E3 1918 aaKnown RBP16.15■□□□□ 0.18
SPARC-203ENST00000521327 BAZ2AQ9UIF9 1905 aaKnown RBP16.15■□□□□ 0.18
SPARC-203ENST00000521327 GNAT2P19087 354 aa16.14■□□□□ 0.17
SPARC-203ENST00000521327 NKX3-2P78367 333 aa16.14■□□□□ 0.17
SPARC-203ENST00000521327 ADGRE1Q14246 886 aa16.14■□□□□ 0.17
SPARC-203ENST00000521327 RAB30Q15771 203 aa16.14■□□□□ 0.17
SPARC-203ENST00000521327 TSHZ3Q63HK5 1081 aa16.14■□□□□ 0.17
SPARC-203ENST00000521327 HERVK_113Q902F9 699 aa16.14■□□□□ 0.17
SPARC-203ENST00000521327 AGBL1Q96MI9 1066 aa16.14■□□□□ 0.17
SPARC-203ENST00000521327 HIPK3Q9H422 1215 aa16.14■□□□□ 0.17
SPARC-203ENST00000521327 A1CFQ9NQ94 594 aaKnown RBP16.14■□□□□ 0.17
SPARC-203ENST00000521327 SYNPO2Q9UMS6 1093 aa16.14■□□□□ 0.17
SPARC-203ENST00000521327 ASTN1O14525 1302 aa16.14■□□□□ 0.17
SPARC-203ENST00000521327 COL11A1P12107 1806 aaPredicted RBP16.13■□□□□ 0.17
SPARC-203ENST00000521327 PARP14Q460N5 1801 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 SOWAHBA6NEL2 793 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 ASB14A6NK59 587 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 PATL2C9JE40 543 aaKnown RBP16.13■□□□□ 0.17
SPARC-203ENST00000521327 M0R2C6 588 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 DYNC1LI2O43237 492 aaPredicted RBP16.13■□□□□ 0.17
SPARC-203ENST00000521327 CABYRO75952 493 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 TSPY3P0CV98 308 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 TSPY8P0CW00 308 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 FDX1P10109 184 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 COL9A1P20849 921 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 PTGS1P23219 599 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 IKQ13123 557 aaPredicted RBP16.13■□□□□ 0.17
SPARC-203ENST00000521327 ITGA7Q13683 1181 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 FSCN1Q16658 493 aaKnown RBP16.13■□□□□ 0.17
SPARC-203ENST00000521327 OTOP2Q7RTS6 562 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 TLK2Q86UE8 772 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 IFNL3Q8IZI9 196 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 SLC43A3Q8NBI5 491 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 NEDD1Q8NHV4 660 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 TRERF1Q96PN7 1200 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 ASB2Q96Q27 587 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 AP5M1Q9H0R1 490 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 MTIF3Q9H2K0 278 aaKnown RBP16.13■□□□□ 0.17
SPARC-203ENST00000521327 NKX2-4Q9H2Z4 354 aa16.13■□□□□ 0.17
SPARC-203ENST00000521327 SLC28A3Q9HAS3 691 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms