RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 SYNGAP1Q96PV0 1343 aa20.07■□□□□ 0.8
SQLE-205ENST00000521232 ZNF865P0CJ78 1059 aaPredicted RBP20.07■□□□□ 0.8
SQLE-205ENST00000521232 CCDC96Q2M329 555 aa20.07■□□□□ 0.8
SQLE-205ENST00000521232 CCDC178Q5BJE1 867 aa20.07■□□□□ 0.8
SQLE-205ENST00000521232 TTBK2Q6IQ55 1244 aa20.07■□□□□ 0.8
SQLE-205ENST00000521232 SENP6Q9GZR1 1112 aaPredicted RBP20.07■□□□□ 0.8
SQLE-205ENST00000521232 PRO3102Q9H379 93 aa20.07■□□□□ 0.8
SQLE-205ENST00000521232 ACAD9Q9H845 621 aa20.07■□□□□ 0.8
SQLE-205ENST00000521232 RAD50Q92878 1312 aa20.06■□□□□ 0.8
SQLE-205ENST00000521232 SNAI1O95863 264 aaPredicted RBP20.06■□□□□ 0.8
SQLE-205ENST00000521232 SNHG28P0DPA3 235 aa20.06■□□□□ 0.8
SQLE-205ENST00000521232 PDHBP11177 359 aa20.06■□□□□ 0.8
SQLE-205ENST00000521232 TAL1P17542 331 aaPredicted RBP20.06■□□□□ 0.8
SQLE-205ENST00000521232 CHMLP26374 656 aa20.06■□□□□ 0.8
SQLE-205ENST00000521232 ANO1Q5XXA6 986 aa20.06■□□□□ 0.8
SQLE-205ENST00000521232 C7orf61Q8IZ16 206 aa20.06■□□□□ 0.8
SQLE-205ENST00000521232 RUFY2Q8WXA3 655 aa20.06■□□□□ 0.8
SQLE-205ENST00000521232 ANKS1AQ92625 1134 aa20.06■□□□□ 0.8
SQLE-205ENST00000521232 TRERF1Q96PN7 1200 aa20.06■□□□□ 0.8
SQLE-205ENST00000521232 RANBP17Q9H2T7 1088 aaKnown RBP20.06■□□□□ 0.8
SQLE-205ENST00000521232 HOMER2Q9NSB8 354 aa20.06■□□□□ 0.8
SQLE-205ENST00000521232 KDM4AO75164 1064 aa20.05■□□□□ 0.8
SQLE-205ENST00000521232 SLC16A2P36021 539 aa20.05■□□□□ 0.8
SQLE-205ENST00000521232 SNAP25P60880 206 aa20.05■□□□□ 0.8
SQLE-205ENST00000521232 LRRC26Q2I0M4 334 aa20.05■□□□□ 0.8
SQLE-205ENST00000521232 GJC2Q5T442 439 aaPredicted RBP20.05■□□□□ 0.8
SQLE-205ENST00000521232 CCDC174Q6PII3 467 aa20.05■□□□□ 0.8
SQLE-205ENST00000521232 IQCA1Q86XH1 822 aa20.05■□□□□ 0.8
SQLE-205ENST00000521232 FGD4Q96M96 766 aa20.05■□□□□ 0.8
SQLE-205ENST00000521232 ZKSCAN3Q9BRR0 538 aa20.05■□□□□ 0.8
SQLE-205ENST00000521232 RNF146Q9NTX7 359 aa20.05■□□□□ 0.8
SQLE-205ENST00000521232 ZSWIM5Q9P217 1185 aa20.05■□□□□ 0.8
SQLE-205ENST00000521232 CNPY2Q9Y2B0 182 aa20.05■□□□□ 0.8
SQLE-205ENST00000521232 B4E1Z4 1266 aa20.04■□□□□ 0.8
SQLE-205ENST00000521232 ALAS1P13196 640 aa20.04■□□□□ 0.8
SQLE-205ENST00000521232 ZNF543Q08ER8 600 aa20.04■□□□□ 0.8
SQLE-205ENST00000521232 SYDE2Q5VT97 1194 aa20.04■□□□□ 0.8
SQLE-205ENST00000521232 FAM133AQ8N9E0 248 aa20.04■□□□□ 0.8
SQLE-205ENST00000521232 KRT23Q9C075 422 aa20.04■□□□□ 0.8
SQLE-205ENST00000521232 GPCPD1Q9NPB8 672 aa20.04■□□□□ 0.8
SQLE-205ENST00000521232 A1CFQ9NQ94 594 aaKnown RBP20.04■□□□□ 0.8
SQLE-205ENST00000521232 RBM27Q9P2N5 1060 aaKnown RBP20.04■□□□□ 0.8
SQLE-205ENST00000521232 FRMPD2Q68DX3 1309 aaPredicted RBP20.03■□□□□ 0.8
SQLE-205ENST00000521232 MCM3APO60318 1980 aa20.03■□□□□ 0.8
SQLE-205ENST00000521232 ICAM1P05362 532 aa20.03■□□□□ 0.8
SQLE-205ENST00000521232 RARBP10826 455 aa20.03■□□□□ 0.8
SQLE-205ENST00000521232 AKR1A1P14550 325 aa20.03■□□□□ 0.8
SQLE-205ENST00000521232 LRRC41Q15345 812 aa20.03■□□□□ 0.8
SQLE-205ENST00000521232 ZSCAN10Q96SZ4 725 aaPredicted RBP20.03■□□□□ 0.8
SQLE-205ENST00000521232 CNNM2Q9H8M5 875 aa20.03■□□□□ 0.8
SQLE-205ENST00000521232 KBTBD13C9JR72 458 aa20.02■□□□□ 0.8
SQLE-205ENST00000521232 POTEB2H3BUK9 544 aa20.02■□□□□ 0.8
SQLE-205ENST00000521232 CNTN2Q02246 1040 aa20.02■□□□□ 0.8
SQLE-205ENST00000521232 MUM1L1Q5H9M0 696 aa20.02■□□□□ 0.8
SQLE-205ENST00000521232 ABHD16BQ9H3Z7 469 aa20.02■□□□□ 0.8
SQLE-205ENST00000521232 XPNPEP3Q9NQH7 507 aa20.02■□□□□ 0.8
SQLE-205ENST00000521232 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.02■□□□□ 0.8
SQLE-205ENST00000521232 FAM184BQ9ULE4 1060 aa20.02■□□□□ 0.8
SQLE-205ENST00000521232 CCPG1Q9ULG6 757 aa20.02■□□□□ 0.8
SQLE-205ENST00000521232 ZMYND8Q9ULU4 1186 aaPredicted RBP20.02■□□□□ 0.8
SQLE-205ENST00000521232 SGSM2O43147 1006 aa20.01■□□□□ 0.79
SQLE-205ENST00000521232 PTH1RQ03431 593 aa20.01■□□□□ 0.79
SQLE-205ENST00000521232 ACVR2BQ13705 512 aa20.01■□□□□ 0.79
SQLE-205ENST00000521232 GPATCH4Q5T3I0 446 aaKnown RBP20.01■□□□□ 0.79
SQLE-205ENST00000521232 ENAHQ8N8S7 591 aaPredicted RBP20.01■□□□□ 0.79
SQLE-205ENST00000521232 PNMA1Q8ND90 353 aa20.01■□□□□ 0.79
SQLE-205ENST00000521232 GDF15Q99988 308 aa20.01■□□□□ 0.79
SQLE-205ENST00000521232 CYP39A1Q9NYL5 469 aa20.01■□□□□ 0.79
SQLE-205ENST00000521232 SZT2Q5T011 3432 aa20.01■□□□□ 0.79
SQLE-205ENST00000521232 SOWAHBA6NEL2 793 aa20■□□□□ 0.79
SQLE-205ENST00000521232 FXR1P51114 621 aaKnown RBP eCLIP20■□□□□ 0.794e-6■□□□□ 10.1
SQLE-205ENST00000521232 ATN1P54259 1190 aaPredicted RBP20■□□□□ 0.79
SQLE-205ENST00000521232 SLC39A5Q6ZMH5 540 aa20■□□□□ 0.79
SQLE-205ENST00000521232 ARMCX2Q7L311 632 aa20■□□□□ 0.79
SQLE-205ENST00000521232 RNF180Q86T96 592 aa20■□□□□ 0.79
SQLE-205ENST00000521232 CCDC144CPQ8IYA2 1237 aa20■□□□□ 0.79
SQLE-205ENST00000521232 KAT14Q9H8E8 782 aa20■□□□□ 0.79
SQLE-205ENST00000521232 PNMA2Q9UL42 364 aa20■□□□□ 0.79
SQLE-205ENST00000521232 LAMA3Q16787 3333 aa19.99■□□□□ 0.79
SQLE-205ENST00000521232 A0A1W2PPC1 479 aa19.99■□□□□ 0.79
SQLE-205ENST00000521232 PGK1P00558 417 aa19.99■□□□□ 0.79
SQLE-205ENST00000521232 MYCNP04198 464 aaPredicted RBP19.99■□□□□ 0.79
SQLE-205ENST00000521232 CYP21A2P08686 494 aa19.99■□□□□ 0.79
SQLE-205ENST00000521232 SYN1P17600 705 aa19.99■□□□□ 0.79
SQLE-205ENST00000521232 BMP8BP34820 402 aa19.99■□□□□ 0.79
SQLE-205ENST00000521232 ADCYAP1R1P41586 468 aa19.99■□□□□ 0.79
SQLE-205ENST00000521232 KATNBL1Q9H079 304 aa19.99■□□□□ 0.79
SQLE-205ENST00000521232 ZHX1Q9UKY1 873 aaPredicted RBP19.99■□□□□ 0.79
SQLE-205ENST00000521232 PHF24Q9UPV7 400 aa19.99■□□□□ 0.79
SQLE-205ENST00000521232 U3KPZ7 1027 aaPredicted RBP19.99■□□□□ 0.79
SQLE-205ENST00000521232 TNKSO95271 1327 aa19.99■□□□□ 0.79
SQLE-205ENST00000521232 ASB14A6NK59 587 aa19.98■□□□□ 0.79
SQLE-205ENST00000521232 ADAMTS4O75173 837 aa19.98■□□□□ 0.79
SQLE-205ENST00000521232 DUSP11O75319 330 aaKnown RBP19.98■□□□□ 0.79
SQLE-205ENST00000521232 GOLGA8HP0CJ92 632 aa19.98■□□□□ 0.79
SQLE-205ENST00000521232 UBAC1Q9BSL1 405 aa19.98■□□□□ 0.79
SQLE-205ENST00000521232 TRDNQ13061 729 aa19.97■□□□□ 0.79
SQLE-205ENST00000521232 SNX17Q15036 470 aa19.97■□□□□ 0.79
SQLE-205ENST00000521232 SEC23AQ15436 765 aa19.97■□□□□ 0.79
SQLE-205ENST00000521232 CCDC144BQ3MJ40 725 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms