RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 CHMP4CQ96CF2 233 aa23.27■■□□□ 1.32
PABPC1-215ENST00000520804 FAM227BQ96M60 508 aa23.27■■□□□ 1.32
PABPC1-215ENST00000520804 ACAD9Q9H845 621 aa23.27■■□□□ 1.32
PABPC1-215ENST00000520804 HOMER2Q9NSB8 354 aa23.27■■□□□ 1.32
PABPC1-215ENST00000520804 ZNF536O15090 1300 aa23.27■■□□□ 1.32
PABPC1-215ENST00000520804 TRIM43BA6NCK2 446 aa23.26■■□□□ 1.31
PABPC1-215ENST00000520804 ORC4O43929 436 aa23.26■■□□□ 1.31
PABPC1-215ENST00000520804 RANBP6O60518 1105 aaKnown RBP23.26■■□□□ 1.31
PABPC1-215ENST00000520804 DUSP11O75319 330 aaKnown RBP23.26■■□□□ 1.31
PABPC1-215ENST00000520804 FGRP09769 529 aa23.26■■□□□ 1.31
PABPC1-215ENST00000520804 ACLYP53396 1101 aa23.26■■□□□ 1.31
PABPC1-215ENST00000520804 MCMDC2Q4G0Z9 681 aa23.26■■□□□ 1.31
PABPC1-215ENST00000520804 RCSD1Q6JBY9 416 aa23.26■■□□□ 1.31
PABPC1-215ENST00000520804 KCTD1Q719H9 257 aa23.26■■□□□ 1.31
PABPC1-215ENST00000520804 TRIM43Q96BQ3 446 aaPredicted RBP23.26■■□□□ 1.31
PABPC1-215ENST00000520804 AGBL1Q96MI9 1066 aa23.26■■□□□ 1.31
PABPC1-215ENST00000520804 ABHD16BQ9H3Z7 469 aa23.26■■□□□ 1.31
PABPC1-215ENST00000520804 MTMR10Q9NXD2 777 aa23.26■■□□□ 1.31
PABPC1-215ENST00000520804 A0A0D9SFI3 127 aa23.25■■□□□ 1.31
PABPC1-215ENST00000520804 ARMCX2Q7L311 632 aa23.25■■□□□ 1.31
PABPC1-215ENST00000520804 RNF146Q9NTX7 359 aa23.25■■□□□ 1.31
PABPC1-215ENST00000520804 MCM3APO60318 1980 aa23.24■■□□□ 1.31
PABPC1-215ENST00000520804 MOXD2PA6NHM9 499 aa23.24■■□□□ 1.31
PABPC1-215ENST00000520804 FGAP02671 866 aa23.24■■□□□ 1.31
PABPC1-215ENST00000520804 CLTBP09497 229 aa23.24■■□□□ 1.31
PABPC1-215ENST00000520804 AAMPQ13685 434 aa23.24■■□□□ 1.31
PABPC1-215ENST00000520804 TKFCQ3LXA3 575 aa23.24■■□□□ 1.31
PABPC1-215ENST00000520804 CCSAPQ6IQ19 270 aaPredicted RBP23.24■■□□□ 1.31
PABPC1-215ENST00000520804 FAM133AQ8N9E0 248 aa23.24■■□□□ 1.31
PABPC1-215ENST00000520804 LNPKQ9C0E8 428 aa23.24■■□□□ 1.31
PABPC1-215ENST00000520804 A1CFQ9NQ94 594 aaKnown RBP23.24■■□□□ 1.31
PABPC1-215ENST00000520804 PRR12Q9ULL5 1215 aa23.24■■□□□ 1.31
PABPC1-215ENST00000520804 MYADML2A6NDP7 307 aa23.23■■□□□ 1.31
PABPC1-215ENST00000520804 POTEB2H3BUK9 544 aa23.23■■□□□ 1.31
PABPC1-215ENST00000520804 CNTN2Q02246 1040 aa23.23■■□□□ 1.31
PABPC1-215ENST00000520804 SHHQ15465 462 aa23.23■■□□□ 1.31
PABPC1-215ENST00000520804 KCNA10Q16322 511 aa23.23■■□□□ 1.31
PABPC1-215ENST00000520804 CCDC144BQ3MJ40 725 aa23.23■■□□□ 1.31
PABPC1-215ENST00000520804 RASGRP2Q7LDG7 609 aa23.23■■□□□ 1.31
PABPC1-215ENST00000520804 CCDC144CPQ8IYA2 1237 aa23.23■■□□□ 1.31
PABPC1-215ENST00000520804 NUP133Q8WUM0 1156 aa23.23■■□□□ 1.31
PABPC1-215ENST00000520804 KATNBL1Q9H079 304 aa23.23■■□□□ 1.31
PABPC1-215ENST00000520804 STARD7Q9NQZ5 370 aa23.23■■□□□ 1.31
PABPC1-215ENST00000520804 STXBP5LQ9Y2K9 1186 aa23.23■■□□□ 1.31
PABPC1-215ENST00000520804 ADCY6O43306 1168 aa23.22■■□□□ 1.31
PABPC1-215ENST00000520804 PQBP1O60828 265 aaKnown RBP23.22■■□□□ 1.31
PABPC1-215ENST00000520804 HSPD1P10809 573 aaKnown RBP23.22■■□□□ 1.31
PABPC1-215ENST00000520804 CST5P28325 142 aaPredicted RBP23.22■■□□□ 1.31
PABPC1-215ENST00000520804 NMIQ13287 307 aaPredicted RBP23.22■■□□□ 1.31
PABPC1-215ENST00000520804 C9orf50Q5SZB4 431 aa23.22■■□□□ 1.31
PABPC1-215ENST00000520804 FAM109BQ6ICB4 259 aaPredicted RBP23.22■■□□□ 1.31
PABPC1-215ENST00000520804 CCDC174Q6PII3 467 aa23.22■■□□□ 1.31
PABPC1-215ENST00000520804 ANKRD33Q7Z3H0 272 aa23.22■■□□□ 1.31
PABPC1-215ENST00000520804 SMC5Q8IY18 1101 aa23.22■■□□□ 1.31
PABPC1-215ENST00000520804 SLC17A8Q8NDX2 589 aa23.22■■□□□ 1.31
PABPC1-215ENST00000520804 DCAF4Q8WV16 495 aa23.22■■□□□ 1.31
PABPC1-215ENST00000520804 TRERF1Q96PN7 1200 aa23.22■■□□□ 1.31
PABPC1-215ENST00000520804 COL6A3P12111 3177 aa23.22■■□□□ 1.31
PABPC1-215ENST00000520804 KIAA0355O15063 1070 aa23.21■■□□□ 1.31
PABPC1-215ENST00000520804 C6orf222P0C671 652 aaPredicted RBP23.21■■□□□ 1.31
PABPC1-215ENST00000520804 ALAS1P13196 640 aa23.21■■□□□ 1.31
PABPC1-215ENST00000520804 ITGB8P26012 769 aa23.21■■□□□ 1.31
PABPC1-215ENST00000520804 SNAP25P60880 206 aa23.21■■□□□ 1.31
PABPC1-215ENST00000520804 IRX5P78411 483 aaPredicted RBP23.21■■□□□ 1.31
PABPC1-215ENST00000520804 ZNF589Q86UQ0 364 aaPredicted RBP23.21■■□□□ 1.31
PABPC1-215ENST00000520804 TOX2Q96NM4 488 aa23.21■■□□□ 1.31
PABPC1-215ENST00000520804 UPF3AQ9H1J1 476 aaKnown RBP23.21■■□□□ 1.31
PABPC1-215ENST00000520804 SPC25Q9HBM1 224 aa23.21■■□□□ 1.31
PABPC1-215ENST00000520804 TOMM22Q9NS69 142 aa23.21■■□□□ 1.31
PABPC1-215ENST00000520804 MTMR7Q9Y216 660 aa23.21■■□□□ 1.31
PABPC1-215ENST00000520804 ZMYM6O95789 1325 aa23.21■■□□□ 1.31
PABPC1-215ENST00000520804 SOWAHBA6NEL2 793 aa23.2■■□□□ 1.3
PABPC1-215ENST00000520804 TRIM6-TRIM34B2RNG4 842 aa23.2■■□□□ 1.3
PABPC1-215ENST00000520804 GJA9P57773 515 aa23.2■■□□□ 1.3
PABPC1-215ENST00000520804 RRP12Q5JTH9 1297 aaKnown RBP23.2■■□□□ 1.3
PABPC1-215ENST00000520804 PCSK9Q8NBP7 692 aaKnown RBP23.2■■□□□ 1.3
PABPC1-215ENST00000520804 GLT1D1Q96MS3 346 aa23.2■■□□□ 1.3
PABPC1-215ENST00000520804 RWDD1Q9H446 243 aaPredicted RBP23.2■■□□□ 1.3
PABPC1-215ENST00000520804 TCP11L1Q9NUJ3 509 aa23.2■■□□□ 1.3
PABPC1-215ENST00000520804 ELP1O95163 1332 aa23.19■■□□□ 1.3
PABPC1-215ENST00000520804 CCDC171Q6TFL3 1326 aa23.19■■□□□ 1.3
PABPC1-215ENST00000520804 ASB14A6NK59 587 aa23.19■■□□□ 1.3
PABPC1-215ENST00000520804 TOP1P11387 765 aaKnown RBP23.19■■□□□ 1.3
PABPC1-215ENST00000520804 FAAP100Q0VG06 881 aa23.19■■□□□ 1.3
PABPC1-215ENST00000520804 CCDC96Q2M329 555 aa23.19■■□□□ 1.3
PABPC1-215ENST00000520804 B4GALNT3Q6L9W6 998 aa23.19■■□□□ 1.3
PABPC1-215ENST00000520804 RILPL2Q969X0 211 aa23.19■■□□□ 1.3
PABPC1-215ENST00000520804 TMEM47Q9BQJ4 181 aa23.19■■□□□ 1.3
PABPC1-215ENST00000520804 TMEM39AQ9NV64 488 aa23.19■■□□□ 1.3
PABPC1-215ENST00000520804 DCDC2CA8MYV0 355 aa23.18■■□□□ 1.3
PABPC1-215ENST00000520804 ASGR1P07306 291 aa23.18■■□□□ 1.3
PABPC1-215ENST00000520804 RAG1P15918 1043 aa23.18■■□□□ 1.3
PABPC1-215ENST00000520804 MUM1L1Q5H9M0 696 aa23.18■■□□□ 1.3
PABPC1-215ENST00000520804 TTBK2Q6IQ55 1244 aa23.18■■□□□ 1.3
PABPC1-215ENST00000520804 BTNL9Q6UXG8 535 aa23.18■■□□□ 1.3
PABPC1-215ENST00000520804 YTHDC1Q96MU7 727 aaKnown RBP23.18■■□□□ 1.3
PABPC1-215ENST00000520804 RANBP17Q9H2T7 1088 aaKnown RBP23.18■■□□□ 1.3
PABPC1-215ENST00000520804 CYP39A1Q9NYL5 469 aa23.18■■□□□ 1.3
PABPC1-215ENST00000520804 CCPG1Q9ULG6 757 aa23.18■■□□□ 1.3
PABPC1-215ENST00000520804 ASTN1O14525 1302 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms