RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 FGAP02671 866 aa9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 TOP1P11387 765 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 GNAT2P19087 354 aa9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 ADD2P35612 726 aa9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 HAND2P61296 217 aa9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 BMS1Q14692 1282 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 ALX1Q15699 326 aa9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 CCDC102BQ68D86 513 aa9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 ZNF771Q7L3S4 317 aaPredicted RBP9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 MIGA2Q7L4E1 593 aa9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 NBPF11Q86T75 865 aa9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 TRIML1Q8N9V2 468 aa9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 ARMC5Q96C12 935 aa9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 ZNF333Q96JL9 665 aa9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 L2HGDHQ9H9P8 463 aa9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 TMOD2Q9NZR1 351 aa9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 DNAI1Q9UI46 699 aa9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 ZNF215Q9UL58 517 aaPredicted RBP9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 LAMB1P07942 1786 aa9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 DOCK2Q92608 1830 aa9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 ERICH2A1L162 156 aa9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 TESPA1A2RU30 521 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 UNCXA6NJT0 531 aa9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 ARHGAP6O43182 974 aa9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 WDHD1O75717 1129 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 BMP15O95972 392 aa9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 POLR3DP05423 398 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 LIFRP42702 1097 aa9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 ZAP70P43403 619 aa9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 BCAMP50895 628 aa9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 SSRP1Q08945 709 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 KIF22Q14807 665 aa9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 ARHGEF6Q15052 776 aa9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 CAVIN4Q5BKX8 364 aa9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 RESP18Q5W5W9 173 aa9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 SGMS1Q86VZ5 419 aa9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 KRI1Q8N9T8 703 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 CNNM3Q8NE01 707 aa9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 TEKT1Q969V4 418 aa9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 NACAP1Q9BZK3 213 aa9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 RNF41Q9H4P4 317 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 HPSEQ9Y251 543 aa9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 RBBP6Q7Z6E9 1792 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 MROH7-TTC4A0A0A0MT08 1334 aa9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 MROH5Q6ZUA9 1318 aa9.82□□□□□ -0.84
CTNNA1-223ENST00000520520 BTBD19C9JJ37 291 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 IRF6O14896 467 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 ATP8B1O43520 1251 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 APPP05067 770 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 XBP1P17861 261 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 ADORA1P30542 326 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 UBASH3AP57075 661 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 ANTXR2P58335 489 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 ETF1P62495 437 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 TUBB4BP68371 445 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 TCP10Q12799 353 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 MAP3K12Q12852 859 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 PPP2R5BQ15173 497 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 RILPL1Q5EBL4 403 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 TMEM67Q5HYA8 995 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 AXDND1Q5T1B0 1012 aaPredicted RBP9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 KRT40Q6A162 431 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 APOA5Q6Q788 366 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 CHST3Q7LGC8 479 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 TMTC2Q8N394 836 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 MLKLQ8NB16 471 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 PYM1Q9BRP8 204 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 TMEM121BQ9BXQ6 578 aaPredicted RBP9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 TRMT1Q9NXH9 659 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 CPA4Q9UI42 421 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.81□□□□□ -0.845e-8■■□□□ 12.8
CTNNA1-223ENST00000520520 SLC12A7Q9Y666 1083 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 SNCAIPQ9Y6H5 919 aa9.81□□□□□ -0.84
CTNNA1-223ENST00000520520 SPDYE5A6NIY4 337 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 USP27XA6NNY8 438 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 FMNL1O95466 1100 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 CETPP11597 493 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 SLC5A1P13866 664 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 PLCG2P16885 1265 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 ARID4AP29374 1257 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 SNAPC2Q13487 334 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 PUM3Q15397 648 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 ELF2Q15723 593 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 TEX35Q5T0J7 233 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 SLC9C2Q5TAH2 1124 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 JAKMIP3Q5VZ66 844 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 ARMCX5Q6P1M9 558 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 TMCO3Q6UWJ1 677 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 KRBA2Q6ZNG9 492 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 FBXO33Q7Z6M2 555 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 ERO1BQ86YB8 467 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 VSTM4Q8IW00 320 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 UBXN4Q92575 508 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 NAPBQ9H115 298 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 BIN2Q9UBW5 565 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 KCNH3Q9ULD8 1083 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 RIPOR2Q9Y4F9 1068 aa9.8□□□□□ -0.84
CTNNA1-223ENST00000520520 NEDD4P46934 1319 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms