RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 RGS22Q8NE09 1264 aa13.48□□□□□ -0.25
SPIDR-212ENST00000519661 TM6SF1Q9BZW5 370 aa13.48□□□□□ -0.25
SPIDR-212ENST00000519661 RIOX1Q9H6W3 641 aa13.48□□□□□ -0.25
SPIDR-212ENST00000519661 MAD2L2Q9UI95 211 aa13.48□□□□□ -0.25
SPIDR-212ENST00000519661 KIAA0100Q14667 2235 aaKnown RBP13.48□□□□□ -0.25
SPIDR-212ENST00000519661 ERICH2A1L162 156 aa13.47□□□□□ -0.25
SPIDR-212ENST00000519661 COBLO75128 1261 aa13.47□□□□□ -0.25
SPIDR-212ENST00000519661 INHAP05111 366 aa13.47□□□□□ -0.25
SPIDR-212ENST00000519661 GJB1P08034 283 aa13.47□□□□□ -0.25
SPIDR-212ENST00000519661 PARP1P09874 1014 aaKnown RBP13.47□□□□□ -0.25
SPIDR-212ENST00000519661 ANAPC15P60006 121 aa13.47□□□□□ -0.25
SPIDR-212ENST00000519661 UBXN2AP68543 259 aa13.47□□□□□ -0.25
SPIDR-212ENST00000519661 CCDC96Q2M329 555 aa13.47□□□□□ -0.25
SPIDR-212ENST00000519661 ADCK5Q3MIX3 580 aa13.47□□□□□ -0.25
SPIDR-212ENST00000519661 TMEM67Q5HYA8 995 aa13.47□□□□□ -0.25
SPIDR-212ENST00000519661 CCAR1Q8IX12 1150 aaKnown RBP13.47□□□□□ -0.25
SPIDR-212ENST00000519661 SH3TC2Q8TF17 1288 aa13.47□□□□□ -0.25
SPIDR-212ENST00000519661 CRISPLD2Q9H0B8 497 aa13.47□□□□□ -0.25
SPIDR-212ENST00000519661 SENP2Q9HC62 589 aa13.47□□□□□ -0.25
SPIDR-212ENST00000519661 SLC5A4Q9NY91 659 aa13.47□□□□□ -0.25
SPIDR-212ENST00000519661 SNX14Q9Y5W7 946 aa13.47□□□□□ -0.25
SPIDR-212ENST00000519661 RPTORQ8N122 1335 aa13.46□□□□□ -0.25
SPIDR-212ENST00000519661 RAD21O60216 631 aa13.46□□□□□ -0.25
SPIDR-212ENST00000519661 ELNP15502 786 aa13.46□□□□□ -0.25
SPIDR-212ENST00000519661 KCTD2Q14681 263 aa13.46□□□□□ -0.25
SPIDR-212ENST00000519661 SLC35G1Q2M3R5 365 aa13.46□□□□□ -0.25
SPIDR-212ENST00000519661 UBE2Q1Q7Z7E8 422 aa13.46□□□□□ -0.25
SPIDR-212ENST00000519661 NCAPG2Q86XI2 1143 aa13.46□□□□□ -0.25
SPIDR-212ENST00000519661 TEX2Q8IWB9 1127 aa13.46□□□□□ -0.25
SPIDR-212ENST00000519661 FAM133AQ8N9E0 248 aa13.46□□□□□ -0.25
SPIDR-212ENST00000519661 MAML3Q96JK9 1138 aa13.46□□□□□ -0.25
SPIDR-212ENST00000519661 FGD4Q96M96 766 aa13.46□□□□□ -0.25
SPIDR-212ENST00000519661 SPZ1Q9BXG8 430 aa13.46□□□□□ -0.25
SPIDR-212ENST00000519661 ACAD9Q9H845 621 aa13.46□□□□□ -0.25
SPIDR-212ENST00000519661 RAVER2Q9HCJ3 691 aaKnown RBP13.46□□□□□ -0.25
SPIDR-212ENST00000519661 PFASO15067 1338 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 SYNGAP1Q96PV0 1343 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 CALM1P0DP23 149 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 CALM2P0DP24 149 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 CALM3P0DP25 149 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 GJA8P48165 433 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 PLS1Q14651 629 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 PPP2R5BQ15173 497 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 CATIPQ7Z7H3 387 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 ADGRF4Q8IZF3 695 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 ZNF654Q8IZM8 581 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 SAMD3Q8N6K7 520 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 NPLOC4Q8TAT6 608 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 MORC4Q8TE76 937 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 CLEC4DQ8WXI8 215 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 AGBL1Q96MI9 1066 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 MMP19Q99542 508 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 LZTS2Q9BRK4 669 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 JMJD4Q9H9V9 463 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 ZSWIM6Q9HCJ5 1215 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 A1CFQ9NQ94 594 aaKnown RBP13.45□□□□□ -0.26
SPIDR-212ENST00000519661 FLRT1Q9NZU1 646 aa13.45□□□□□ -0.26
SPIDR-212ENST00000519661 FRMPD2Q68DX3 1309 aaPredicted RBP13.44□□□□□ -0.26
SPIDR-212ENST00000519661 KLRF2D3W0D1 207 aa13.44□□□□□ -0.26
SPIDR-212ENST00000519661 CYTH3O43739 400 aa13.44□□□□□ -0.26
SPIDR-212ENST00000519661 CYBAP13498 195 aa13.44□□□□□ -0.26
SPIDR-212ENST00000519661 CCL5P13501 91 aa13.44□□□□□ -0.26
SPIDR-212ENST00000519661 CYP2B6P20813 491 aa13.44□□□□□ -0.26
SPIDR-212ENST00000519661 KIF5BP33176 963 aa13.44□□□□□ -0.26
SPIDR-212ENST00000519661 SLC16A2P36021 539 aa13.44□□□□□ -0.26
SPIDR-212ENST00000519661 MTFR1Q15390 333 aa13.44□□□□□ -0.26
SPIDR-212ENST00000519661 CCL14Q16627 93 aa13.44□□□□□ -0.26
SPIDR-212ENST00000519661 APOA5Q6Q788 366 aa13.44□□□□□ -0.26
SPIDR-212ENST00000519661 STAG2Q8N3U4 1231 aa13.44□□□□□ -0.26
SPIDR-212ENST00000519661 GPCPD1Q9NPB8 672 aa13.44□□□□□ -0.26
SPIDR-212ENST00000519661 GPHNQ9NQX3 736 aaPredicted RBP13.44□□□□□ -0.26
SPIDR-212ENST00000519661 RNF146Q9NTX7 359 aa13.44□□□□□ -0.26
SPIDR-212ENST00000519661 MKI67P46013 3256 aaKnown RBP13.44□□□□□ -0.26
SPIDR-212ENST00000519661 ZBTB5O15062 677 aa13.43□□□□□ -0.26
SPIDR-212ENST00000519661 GOLGA8HP0CJ92 632 aa13.43□□□□□ -0.26
SPIDR-212ENST00000519661 PRKAR2AP13861 404 aaKnown RBP13.43□□□□□ -0.26
SPIDR-212ENST00000519661 PSMA5P28066 241 aa13.43□□□□□ -0.26
SPIDR-212ENST00000519661 GNAQP50148 359 aa13.43□□□□□ -0.26
SPIDR-212ENST00000519661 CACNB2Q08289 660 aaPredicted RBP13.43□□□□□ -0.26
SPIDR-212ENST00000519661 TRAF1Q13077 416 aa13.43□□□□□ -0.26
SPIDR-212ENST00000519661 IKQ13123 557 aaPredicted RBP13.43□□□□□ -0.26
SPIDR-212ENST00000519661 CHST3Q7LGC8 479 aa13.43□□□□□ -0.26
SPIDR-212ENST00000519661 CPXCR1Q8N123 301 aa13.43□□□□□ -0.26
SPIDR-212ENST00000519661 ANKLE1Q8NAG6 615 aa13.43□□□□□ -0.26
SPIDR-212ENST00000519661 SHISA4Q96DD7 197 aa13.43□□□□□ -0.26
SPIDR-212ENST00000519661 TRERF1Q96PN7 1200 aa13.43□□□□□ -0.26
SPIDR-212ENST00000519661 TINF2Q9BSI4 451 aa13.43□□□□□ -0.26
SPIDR-212ENST00000519661 ALDH8A1Q9H2A2 487 aaPredicted RBP13.43□□□□□ -0.26
SPIDR-212ENST00000519661 MAP3K20Q9NYL2 800 aaKnown RBP13.43□□□□□ -0.26
SPIDR-212ENST00000519661 CYP39A1Q9NYL5 469 aa13.43□□□□□ -0.26
SPIDR-212ENST00000519661 CCPG1Q9ULG6 757 aa13.43□□□□□ -0.26
SPIDR-212ENST00000519661 ABCB11O95342 1321 aa13.42□□□□□ -0.26
SPIDR-212ENST00000519661 POTEFA5A3E0 1075 aa13.42□□□□□ -0.26
SPIDR-212ENST00000519661 CCDC85CA6NKD9 419 aa13.42□□□□□ -0.26
SPIDR-212ENST00000519661 MSCO60682 206 aa13.42□□□□□ -0.26
SPIDR-212ENST00000519661 RPS6KB1P23443 525 aa13.42□□□□□ -0.26
SPIDR-212ENST00000519661 FUT2Q10981 343 aa13.42□□□□□ -0.26
SPIDR-212ENST00000519661 CDC37Q16543 378 aaPredicted RBP13.42□□□□□ -0.26
SPIDR-212ENST00000519661 QRICH1Q2TAL8 776 aa13.42□□□□□ -0.26
SPIDR-212ENST00000519661 C8orf34Q49A92 452 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms