RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 MCM3APO60318 1980 aa14.74□□□□□ -0.05
CSMD1-205ENST00000519623 TRIM43BA6NCK2 446 aa14.73□□□□□ -0.05
CSMD1-205ENST00000519623 IGHDP01880 384 aa14.73□□□□□ -0.05
CSMD1-205ENST00000519623 HSPD1P10809 573 aaKnown RBP14.73□□□□□ -0.05
CSMD1-205ENST00000519623 CNTN2Q02246 1040 aa14.73□□□□□ -0.05
CSMD1-205ENST00000519623 NMIQ13287 307 aaPredicted RBP14.73□□□□□ -0.05
CSMD1-205ENST00000519623 ACVR2BQ13705 512 aa14.73□□□□□ -0.05
CSMD1-205ENST00000519623 CCSAPQ6IQ19 270 aaPredicted RBP14.73□□□□□ -0.05
CSMD1-205ENST00000519623 ZNF589Q86UQ0 364 aaPredicted RBP14.73□□□□□ -0.05
CSMD1-205ENST00000519623 TRIM43Q96BQ3 446 aaPredicted RBP14.73□□□□□ -0.05
CSMD1-205ENST00000519623 YTHDC1Q96MU7 727 aaKnown RBP14.73□□□□□ -0.05
CSMD1-205ENST00000519623 TSEN34Q9BSV6 310 aaKnown RBP14.73□□□□□ -0.05
CSMD1-205ENST00000519623 ABHD16BQ9H3Z7 469 aa14.73□□□□□ -0.05
CSMD1-205ENST00000519623 RWDD1Q9H446 243 aaPredicted RBP14.73□□□□□ -0.05
CSMD1-205ENST00000519623 PDLIM7Q9NR12 457 aa14.73□□□□□ -0.05
CSMD1-205ENST00000519623 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.73□□□□□ -0.05
CSMD1-205ENST00000519623 LTBP2Q14767 1821 aa14.73□□□□□ -0.05
CSMD1-205ENST00000519623 A0A1W2PQ45 241 aaPredicted RBP14.72□□□□□ -0.05
CSMD1-205ENST00000519623 A0A1W2PQY0 241 aa14.72□□□□□ -0.05
CSMD1-205ENST00000519623 ADCY6O43306 1168 aa14.72□□□□□ -0.05
CSMD1-205ENST00000519623 DUSP11O75319 330 aaKnown RBP14.72□□□□□ -0.05
CSMD1-205ENST00000519623 B4GALNT3Q6L9W6 998 aa14.72□□□□□ -0.05
CSMD1-205ENST00000519623 Q7L0L9 218 aa14.72□□□□□ -0.05
CSMD1-205ENST00000519623 RASGRP2Q7LDG7 609 aa14.72□□□□□ -0.05
CSMD1-205ENST00000519623 PLEKHM2Q8IWE5 1019 aa14.72□□□□□ -0.05
CSMD1-205ENST00000519623 DEFB123Q8N688 67 aa14.72□□□□□ -0.05
CSMD1-205ENST00000519623 FAM133AQ8N9E0 248 aa14.72□□□□□ -0.05
CSMD1-205ENST00000519623 BADQ92934 168 aa14.72□□□□□ -0.05
CSMD1-205ENST00000519623 KATNBL1Q9H079 304 aa14.72□□□□□ -0.05
CSMD1-205ENST00000519623 ACAD9Q9H845 621 aa14.72□□□□□ -0.05
CSMD1-205ENST00000519623 HOMER2Q9NSB8 354 aa14.72□□□□□ -0.05
CSMD1-205ENST00000519623 ZHX1Q9UKY1 873 aaPredicted RBP14.72□□□□□ -0.05
CSMD1-205ENST00000519623 PRR12Q9ULL5 1215 aa14.72□□□□□ -0.05
CSMD1-205ENST00000519623 SYNRGQ9UMZ2 1314 aa14.71□□□□□ -0.05
CSMD1-205ENST00000519623 ACLYP53396 1101 aa14.71□□□□□ -0.05
CSMD1-205ENST00000519623 SNAP25P60880 206 aa14.71□□□□□ -0.05
CSMD1-205ENST00000519623 IRX5P78411 483 aaPredicted RBP14.71□□□□□ -0.05
CSMD1-205ENST00000519623 IKQ13123 557 aaPredicted RBP14.71□□□□□ -0.05
CSMD1-205ENST00000519623 KCNA10Q16322 511 aa14.71□□□□□ -0.05
CSMD1-205ENST00000519623 TKFCQ3LXA3 575 aa14.71□□□□□ -0.05
CSMD1-205ENST00000519623 CCDC144BQ3MJ40 725 aa14.71□□□□□ -0.05
CSMD1-205ENST00000519623 ARMCX2Q7L311 632 aa14.71□□□□□ -0.05
CSMD1-205ENST00000519623 CCDC144CPQ8IYA2 1237 aa14.71□□□□□ -0.05
CSMD1-205ENST00000519623 TRERF1Q96PN7 1200 aa14.71□□□□□ -0.05
CSMD1-205ENST00000519623 OSBPL3Q9H4L5 887 aa14.71□□□□□ -0.05
CSMD1-205ENST00000519623 A1CFQ9NQ94 594 aaKnown RBP14.71□□□□□ -0.05
CSMD1-205ENST00000519623 PRDM5Q9NQX1 630 aaPredicted RBP14.71□□□□□ -0.05
CSMD1-205ENST00000519623 RNF146Q9NTX7 359 aa14.71□□□□□ -0.05
CSMD1-205ENST00000519623 TCP11L1Q9NUJ3 509 aa14.71□□□□□ -0.05
CSMD1-205ENST00000519623 MTMR10Q9NXD2 777 aa14.71□□□□□ -0.05
CSMD1-205ENST00000519623 ISY1Q9ULR0 285 aaKnown RBP14.71□□□□□ -0.05
CSMD1-205ENST00000519623 ZMYM6O95789 1325 aa14.7□□□□□ -0.06
CSMD1-205ENST00000519623 MYADML2A6NDP7 307 aa14.7□□□□□ -0.06
CSMD1-205ENST00000519623 SOWAHBA6NEL2 793 aa14.7□□□□□ -0.06
CSMD1-205ENST00000519623 TRIM6-TRIM34B2RNG4 842 aa14.7□□□□□ -0.06
CSMD1-205ENST00000519623 POTEB2H3BUK9 544 aa14.7□□□□□ -0.06
CSMD1-205ENST00000519623 SDSP20132 328 aa14.7□□□□□ -0.06
CSMD1-205ENST00000519623 ITGB8P26012 769 aa14.7□□□□□ -0.06
CSMD1-205ENST00000519623 NUCB1Q02818 461 aa14.7□□□□□ -0.06
CSMD1-205ENST00000519623 SHHQ15465 462 aa14.7□□□□□ -0.06
CSMD1-205ENST00000519623 TTBK2Q6IQ55 1244 aa14.7□□□□□ -0.06
CSMD1-205ENST00000519623 CCDC174Q6PII3 467 aa14.7□□□□□ -0.06
CSMD1-205ENST00000519623 BTNL9Q6UXG8 535 aa14.7□□□□□ -0.06
CSMD1-205ENST00000519623 CHD1LQ86WJ1 897 aa14.7□□□□□ -0.06
CSMD1-205ENST00000519623 EXOC6Q8TAG9 804 aa14.7□□□□□ -0.06
CSMD1-205ENST00000519623 DCAF4Q8WV16 495 aa14.7□□□□□ -0.06
CSMD1-205ENST00000519623 RILPL2Q969X0 211 aa14.7□□□□□ -0.06
CSMD1-205ENST00000519623 TMEM47Q9BQJ4 181 aa14.7□□□□□ -0.06
CSMD1-205ENST00000519623 COL6A3P12111 3177 aa14.7□□□□□ -0.06
CSMD1-205ENST00000519623 CCDC171Q6TFL3 1326 aa14.69□□□□□ -0.06
CSMD1-205ENST00000519623 MOXD2PA6NHM9 499 aa14.69□□□□□ -0.06
CSMD1-205ENST00000519623 TOP1P11387 765 aaKnown RBP14.69□□□□□ -0.06
CSMD1-205ENST00000519623 ALAS1P13196 640 aa14.69□□□□□ -0.06
CSMD1-205ENST00000519623 CST5P28325 142 aaPredicted RBP14.69□□□□□ -0.06
CSMD1-205ENST00000519623 GJA9P57773 515 aa14.69□□□□□ -0.06
CSMD1-205ENST00000519623 HAND2P61296 217 aa14.69□□□□□ -0.06
CSMD1-205ENST00000519623 MUM1L1Q5H9M0 696 aa14.69□□□□□ -0.06
CSMD1-205ENST00000519623 RRP12Q5JTH9 1297 aaKnown RBP14.69□□□□□ -0.06
CSMD1-205ENST00000519623 C9orf50Q5SZB4 431 aa14.69□□□□□ -0.06
CSMD1-205ENST00000519623 ANKRD33Q7Z3H0 272 aa14.69□□□□□ -0.06
CSMD1-205ENST00000519623 TOX2Q96NM4 488 aa14.69□□□□□ -0.06
CSMD1-205ENST00000519623 UPF3AQ9H1J1 476 aaKnown RBP14.69□□□□□ -0.06
CSMD1-205ENST00000519623 TOMM22Q9NS69 142 aa14.69□□□□□ -0.06
CSMD1-205ENST00000519623 MTMR7Q9Y216 660 aa14.69□□□□□ -0.06
CSMD1-205ENST00000519623 ASTN1O14525 1302 aa14.68□□□□□ -0.06
CSMD1-205ENST00000519623 KIAA0355O15063 1070 aa14.68□□□□□ -0.06
CSMD1-205ENST00000519623 CTAGE5O15320 804 aa14.68□□□□□ -0.06
CSMD1-205ENST00000519623 PQBP1O60828 265 aaKnown RBP14.68□□□□□ -0.06
CSMD1-205ENST00000519623 ICAM1P05362 532 aa14.68□□□□□ -0.06
CSMD1-205ENST00000519623 CLTBP09497 229 aa14.68□□□□□ -0.06
CSMD1-205ENST00000519623 SLC16A2P36021 539 aa14.68□□□□□ -0.06
CSMD1-205ENST00000519623 CDK7P50613 346 aa14.68□□□□□ -0.06
CSMD1-205ENST00000519623 NKX3-2P78367 333 aa14.68□□□□□ -0.06
CSMD1-205ENST00000519623 FAAP100Q0VG06 881 aa14.68□□□□□ -0.06
CSMD1-205ENST00000519623 AKNAD1Q5T1N1 836 aa14.68□□□□□ -0.06
CSMD1-205ENST00000519623 FAM109BQ6ICB4 259 aaPredicted RBP14.68□□□□□ -0.06
CSMD1-205ENST00000519623 NUP133Q8WUM0 1156 aa14.68□□□□□ -0.06
CSMD1-205ENST00000519623 RANBP17Q9H2T7 1088 aaKnown RBP14.68□□□□□ -0.06
CSMD1-205ENST00000519623 STARD7Q9NQZ5 370 aa14.68□□□□□ -0.06
CSMD1-205ENST00000519623 CYP39A1Q9NYL5 469 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms