RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 DCDC2CA8MYV0 355 aa16.29■□□□□ 0.2
VDAC3-204ENST00000519072 PATL2C9JE40 543 aaKnown RBP16.29■□□□□ 0.2
VDAC3-204ENST00000519072 TTLL1O95922 423 aa16.29■□□□□ 0.2
VDAC3-204ENST00000519072 APPP05067 770 aa16.29■□□□□ 0.2
VDAC3-204ENST00000519072 CST5P28325 142 aaPredicted RBP16.29■□□□□ 0.2
VDAC3-204ENST00000519072 SLC4A3P48751 1232 aa16.29■□□□□ 0.2
VDAC3-204ENST00000519072 FPGSQ05932 587 aa16.29■□□□□ 0.2
VDAC3-204ENST00000519072 ACVR2BQ13705 512 aa16.29■□□□□ 0.2
VDAC3-204ENST00000519072 KCNA10Q16322 511 aa16.29■□□□□ 0.2
VDAC3-204ENST00000519072 LRRFIP1Q32MZ4 808 aaKnown RBP16.29■□□□□ 0.2
VDAC3-204ENST00000519072 IFNL3Q8IZI9 196 aa16.29■□□□□ 0.2
VDAC3-204ENST00000519072 ANKRD35Q8N283 1001 aa16.29■□□□□ 0.2
VDAC3-204ENST00000519072 FGD4Q96M96 766 aa16.29■□□□□ 0.2
VDAC3-204ENST00000519072 ABHD16BQ9H3Z7 469 aa16.29■□□□□ 0.2
VDAC3-204ENST00000519072 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.29■□□□□ 0.2
VDAC3-204ENST00000519072 TTC28Q96AY4 2481 aa16.28■□□□□ 0.2
VDAC3-204ENST00000519072 ELP1O95163 1332 aa16.28■□□□□ 0.2
VDAC3-204ENST00000519072 MYADML2A6NDP7 307 aa16.28■□□□□ 0.2
VDAC3-204ENST00000519072 FDX1P10109 184 aa16.28■□□□□ 0.2
VDAC3-204ENST00000519072 LRRC47Q8N1G4 583 aaKnown RBP16.28■□□□□ 0.2
VDAC3-204ENST00000519072 NEDD1Q8NHV4 660 aa16.28■□□□□ 0.2
VDAC3-204ENST00000519072 MAFAQ8NHW3 353 aaPredicted RBP16.28■□□□□ 0.2
VDAC3-204ENST00000519072 GLT1D1Q96MS3 346 aa16.28■□□□□ 0.2
VDAC3-204ENST00000519072 UPF3AQ9H1J1 476 aaKnown RBP16.28■□□□□ 0.2
VDAC3-204ENST00000519072 TBX21Q9UL17 535 aa16.28■□□□□ 0.2
VDAC3-204ENST00000519072 MROH7Q68CQ1 1323 aa16.27■□□□□ 0.2
VDAC3-204ENST00000519072 TTC41PQ6P2S7 1318 aa16.27■□□□□ 0.2
VDAC3-204ENST00000519072 ADCY6O43306 1168 aa16.27■□□□□ 0.2
VDAC3-204ENST00000519072 C6orf222P0C671 652 aaPredicted RBP16.27■□□□□ 0.2
VDAC3-204ENST00000519072 BMP3P12645 472 aa16.27■□□□□ 0.2
VDAC3-204ENST00000519072 FXR2P51116 673 aaKnown RBP eCLIP16.27■□□□□ 0.2
VDAC3-204ENST00000519072 GJA9P57773 515 aa16.27■□□□□ 0.2
VDAC3-204ENST00000519072 PDE4BQ07343 736 aa16.27■□□□□ 0.2
VDAC3-204ENST00000519072 CCDC144BQ3MJ40 725 aa16.27■□□□□ 0.2
VDAC3-204ENST00000519072 SLFN13Q68D06 897 aa16.27■□□□□ 0.2
VDAC3-204ENST00000519072 ARMCX2Q7L311 632 aa16.27■□□□□ 0.2
VDAC3-204ENST00000519072 PCSK9Q8NBP7 692 aaKnown RBP16.27■□□□□ 0.2
VDAC3-204ENST00000519072 MYLIPQ8WY64 445 aa16.27■□□□□ 0.2
VDAC3-204ENST00000519072 NACAP1Q9BZK3 213 aa16.27■□□□□ 0.2
VDAC3-204ENST00000519072 SPC25Q9HBM1 224 aa16.27■□□□□ 0.2
VDAC3-204ENST00000519072 TIMP1P01033 207 aa16.26■□□□□ 0.19
VDAC3-204ENST00000519072 ASGR1P07306 291 aa16.26■□□□□ 0.19
VDAC3-204ENST00000519072 TSPY3P0CV98 308 aa16.26■□□□□ 0.19
VDAC3-204ENST00000519072 TSPY8P0CW00 308 aa16.26■□□□□ 0.19
VDAC3-204ENST00000519072 CDK7P50613 346 aa16.26■□□□□ 0.19
VDAC3-204ENST00000519072 SPDYE1Q8NFV5 336 aaPredicted RBP16.26■□□□□ 0.19
VDAC3-204ENST00000519072 SEC62Q99442 399 aaKnown RBP16.26■□□□□ 0.19
VDAC3-204ENST00000519072 KATNBL1Q9H079 304 aa16.26■□□□□ 0.19
VDAC3-204ENST00000519072 MYO9BQ13459 2157 aa16.26■□□□□ 0.19
VDAC3-204ENST00000519072 LRRC37A2A6NM11 1700 aa16.25■□□□□ 0.19
VDAC3-204ENST00000519072 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.25■□□□□ 0.19
VDAC3-204ENST00000519072 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.25■□□□□ 0.19
VDAC3-204ENST00000519072 TMEM232C9JQI7 657 aa16.25■□□□□ 0.19
VDAC3-204ENST00000519072 ERC2O15083 957 aa16.25■□□□□ 0.19
VDAC3-204ENST00000519072 SLC3A2P08195 630 aaKnown RBP16.25■□□□□ 0.19
VDAC3-204ENST00000519072 FOSL2P15408 326 aa16.25■□□□□ 0.19
VDAC3-204ENST00000519072 STAT2P52630 851 aa16.25■□□□□ 0.19
VDAC3-204ENST00000519072 IRX5P78411 483 aaPredicted RBP16.25■□□□□ 0.19
VDAC3-204ENST00000519072 TFAP4Q01664 338 aa16.25■□□□□ 0.19
VDAC3-204ENST00000519072 MFSD5Q6N075 450 aa16.25■□□□□ 0.19
VDAC3-204ENST00000519072 CCDC144CPQ8IYA2 1237 aa16.25■□□□□ 0.19
VDAC3-204ENST00000519072 FAM133AQ8N9E0 248 aa16.25■□□□□ 0.19
VDAC3-204ENST00000519072 PI4K2BQ8TCG2 481 aa16.25■□□□□ 0.19
VDAC3-204ENST00000519072 NAPBQ9H115 298 aa16.25■□□□□ 0.19
VDAC3-204ENST00000519072 ACAD9Q9H845 621 aa16.25■□□□□ 0.19
VDAC3-204ENST00000519072 CHD9Q3L8U1 2897 aa16.24■□□□□ 0.19
VDAC3-204ENST00000519072 A0A0U1RQG5 324 aaPredicted RBP16.24■□□□□ 0.19
VDAC3-204ENST00000519072 ARVCFO00192 962 aa16.24■□□□□ 0.19
VDAC3-204ENST00000519072 NKX3-2P78367 333 aa16.24■□□□□ 0.19
VDAC3-204ENST00000519072 PPARAQ07869 468 aa16.24■□□□□ 0.19
VDAC3-204ENST00000519072 PPP4R3BQ5MIZ7 849 aa16.24■□□□□ 0.19
VDAC3-204ENST00000519072 ZMYM1Q5SVZ6 1142 aa16.24■□□□□ 0.19
VDAC3-204ENST00000519072 FAM160B2Q86V87 743 aa16.24■□□□□ 0.19
VDAC3-204ENST00000519072 CHURC1Q8WUH1 139 aa16.24■□□□□ 0.19
VDAC3-204ENST00000519072 GMCL1Q96IK5 515 aa16.24■□□□□ 0.19
VDAC3-204ENST00000519072 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.24■□□□□ 0.19
VDAC3-204ENST00000519072 HOMER2Q9NSB8 354 aa16.24■□□□□ 0.19
VDAC3-204ENST00000519072 ZNF536O15090 1300 aa16.23■□□□□ 0.19
VDAC3-204ENST00000519072 CTAGE5O15320 804 aa16.23■□□□□ 0.19
VDAC3-204ENST00000519072 PLA2G6O60733 806 aa16.23■□□□□ 0.19
VDAC3-204ENST00000519072 CNTN2Q02246 1040 aa16.23■□□□□ 0.19
VDAC3-204ENST00000519072 PPIGQ13427 754 aaKnown RBP eCLIP16.23■□□□□ 0.19
VDAC3-204ENST00000519072 TKFCQ3LXA3 575 aa16.23■□□□□ 0.19
VDAC3-204ENST00000519072 GNASQ5JWF2 1037 aa16.23■□□□□ 0.19
VDAC3-204ENST00000519072 STAG1Q8WVM7 1258 aa16.23■□□□□ 0.19
VDAC3-204ENST00000519072 VTI1AQ96AJ9 217 aa16.23■□□□□ 0.19
VDAC3-204ENST00000519072 FSD1Q9BTV5 496 aa16.23■□□□□ 0.19
VDAC3-204ENST00000519072 A1CFQ9NQ94 594 aaKnown RBP16.23■□□□□ 0.19
VDAC3-204ENST00000519072 RNF146Q9NTX7 359 aa16.23■□□□□ 0.19
VDAC3-204ENST00000519072 ISY1Q9ULR0 285 aaKnown RBP16.23■□□□□ 0.19
VDAC3-204ENST00000519072 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.23■□□□□ 0.19
VDAC3-204ENST00000519072 LCTP09848 1927 aa16.23■□□□□ 0.19
VDAC3-204ENST00000519072 SOWAHBA6NEL2 793 aa16.22■□□□□ 0.19
VDAC3-204ENST00000519072 ASB14A6NK59 587 aa16.22■□□□□ 0.19
VDAC3-204ENST00000519072 DNAJB2P25686 324 aa16.22■□□□□ 0.19
VDAC3-204ENST00000519072 SLC1A4P43007 532 aa16.22■□□□□ 0.19
VDAC3-204ENST00000519072 CCDC174Q6PII3 467 aa16.22■□□□□ 0.19
VDAC3-204ENST00000519072 FAM126BQ8IXS8 530 aa16.22■□□□□ 0.19
VDAC3-204ENST00000519072 AGBL1Q96MI9 1066 aa16.22■□□□□ 0.19
VDAC3-204ENST00000519072 TLR3O15455 904 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms