RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 KBTBD3Q8NAB2 608 aa15.05■□□□□ -0
PABPC1-208ENST00000519004 EYA1Q99502 592 aa15.05■□□□□ -0
PABPC1-208ENST00000519004 HELLSQ9NRZ9 838 aa15.05■□□□□ -0
PABPC1-208ENST00000519004 PLAAQ9Y263 795 aa15.05■□□□□ -0
PABPC1-208ENST00000519004 MAP3K2Q9Y2U5 619 aa15.05■□□□□ -0
PABPC1-208ENST00000519004 NALCNQ8IZF0 1738 aa15.05■□□□□ -0
PABPC1-208ENST00000519004 IGSF1Q8N6C5 1336 aa15.05■□□□□ -0
PABPC1-208ENST00000519004 DDX60Q8IY21 1712 aaKnown RBP15.04■□□□□ -0
PABPC1-208ENST00000519004 FMN2Q9NZ56 1722 aa15.04■□□□□ -0
PABPC1-208ENST00000519004 UPP2O95045 317 aa15.04■□□□□ -0
PABPC1-208ENST00000519004 PRLRP16471 622 aa15.04■□□□□ -0
PABPC1-208ENST00000519004 TTF1Q15361 905 aaPredicted RBP15.04■□□□□ -0
PABPC1-208ENST00000519004 IFT20Q8IY31 132 aa15.04■□□□□ -0
PABPC1-208ENST00000519004 GALNT15Q8N3T1 639 aa15.04■□□□□ -0
PABPC1-208ENST00000519004 ZFAND2BQ8WV99 257 aa15.04■□□□□ -0
PABPC1-208ENST00000519004 TAF1DQ9H5J8 278 aaPredicted RBP15.04■□□□□ -0
PABPC1-208ENST00000519004 CTNND2Q9UQB3 1225 aa15.04■□□□□ -0
PABPC1-208ENST00000519004 ZSCAN5CA6NGD5 496 aaPredicted RBP15.04■□□□□ -0
PABPC1-208ENST00000519004 F8W031 263 aaPredicted RBP15.04■□□□□ -0
PABPC1-208ENST00000519004 PRC1O43663 620 aa15.04■□□□□ -0
PABPC1-208ENST00000519004 RNF8O76064 485 aa15.04■□□□□ -0
PABPC1-208ENST00000519004 CASP1P29466 404 aa15.04■□□□□ -0
PABPC1-208ENST00000519004 GUCY2FP51841 1108 aa15.04■□□□□ -0
PABPC1-208ENST00000519004 ZMYM1Q5SVZ6 1142 aa15.04■□□□□ -0
PABPC1-208ENST00000519004 USP49Q70CQ1 688 aa15.04■□□□□ -0
PABPC1-208ENST00000519004 FAM167BQ9BTA0 163 aa15.04■□□□□ -0
PABPC1-208ENST00000519004 OSBPL1AQ9BXW6 950 aa15.04■□□□□ -0
PABPC1-208ENST00000519004 TSGA10Q9BZW7 698 aa15.04■□□□□ -0
PABPC1-208ENST00000519004 RBM12Q9NTZ6 932 aaKnown RBP15.04■□□□□ -0
PABPC1-208ENST00000519004 ESYT3A0FGR9 886 aa15.03■□□□□ -0
PABPC1-208ENST00000519004 PHF20L1A8MW92 1017 aa15.03■□□□□ -0
PABPC1-208ENST00000519004 IFIT3O14879 490 aaKnown RBP15.03■□□□□ -0
PABPC1-208ENST00000519004 MEA1Q16626 185 aa15.03■□□□□ -0
PABPC1-208ENST00000519004 TNNI3KQ59H18 835 aa15.03■□□□□ -0
PABPC1-208ENST00000519004 NFRKBQ6P4R8 1299 aa15.03■□□□□ -0
PABPC1-208ENST00000519004 MAATS1Q7Z4T9 603 aa15.03■□□□□ -0
PABPC1-208ENST00000519004 SMCR8Q8TEV9 937 aaPredicted RBP15.03■□□□□ -0
PABPC1-208ENST00000519004 RBM33Q96EV2 1170 aaKnown RBP15.03■□□□□ -0
PABPC1-208ENST00000519004 CNOT8Q9UFF9 292 aaKnown RBP15.03■□□□□ -0
PABPC1-208ENST00000519004 CCDC61Q9Y6R9 512 aa15.03■□□□□ -0
PABPC1-208ENST00000519004 FPGT-TNNI3KV9GXZ4 949 aa15.03■□□□□ -0
PABPC1-208ENST00000519004 ECM29Q5VYK3 1845 aa15.03■□□□□ -0
PABPC1-208ENST00000519004 MAP3K13O43283 966 aa15.03■□□□□ -0
PABPC1-208ENST00000519004 LUC7L3O95232 432 aaKnown RBP15.03■□□□□ -0
PABPC1-208ENST00000519004 RANBP1P43487 201 aa15.03■□□□□ -0
PABPC1-208ENST00000519004 ANTXR2P58335 489 aa15.03■□□□□ -0
PABPC1-208ENST00000519004 EIF4A1P60842 406 aaKnown RBP15.03■□□□□ -0
PABPC1-208ENST00000519004 MTA1Q13330 715 aa15.03■□□□□ -0
PABPC1-208ENST00000519004 TBC1D1Q86TI0 1168 aaPredicted RBP15.03■□□□□ -0
PABPC1-208ENST00000519004 NCAPG2Q86XI2 1143 aa15.03■□□□□ -0
PABPC1-208ENST00000519004 MB21D2Q8IYB1 491 aaPredicted RBP15.03■□□□□ -0
PABPC1-208ENST00000519004 CAPN6Q9Y6Q1 641 aa15.03■□□□□ -0
PABPC1-208ENST00000519004 UTYO14607 1347 aa15.03■□□□□ -0
PABPC1-208ENST00000519004 DPPA5A6NC42 116 aa15.02■□□□□ -0
PABPC1-208ENST00000519004 CFAP73A6NFT4 308 aa15.02■□□□□ -0
PABPC1-208ENST00000519004 GRM8O00222 908 aa15.02■□□□□ -0
PABPC1-208ENST00000519004 TOB1P50616 345 aaPredicted RBP15.02■□□□□ -0
PABPC1-208ENST00000519004 UBXN1Q04323 297 aa15.02■□□□□ -0
PABPC1-208ENST00000519004 TCP11X2Q5H9J9 407 aa15.02■□□□□ -0
PABPC1-208ENST00000519004 ARHGAP22Q7Z5H3 698 aa15.02■□□□□ -0
PABPC1-208ENST00000519004 IFT81Q8WYA0 676 aa15.02■□□□□ -0
PABPC1-208ENST00000519004 G3BP2Q9UN86 482 aaKnown RBP15.02■□□□□ -0
PABPC1-208ENST00000519004 LUC7L2Q9Y383 392 aaKnown RBP15.02■□□□□ -0
PABPC1-208ENST00000519004 ORC4O43929 436 aa15.02□□□□□ -0.01
PABPC1-208ENST00000519004 SMIM24O75264 130 aa15.02□□□□□ -0.01
PABPC1-208ENST00000519004 CYLC1P35663 651 aaPredicted RBP15.02□□□□□ -0.01
PABPC1-208ENST00000519004 HSPA9P38646 679 aaKnown RBP15.02□□□□□ -0.01
PABPC1-208ENST00000519004 LRIG3Q6UXM1 1119 aa15.02□□□□□ -0.01
PABPC1-208ENST00000519004 USP31Q70CQ4 1352 aa15.02□□□□□ -0.01
PABPC1-208ENST00000519004 SH3RF1Q7Z6J0 888 aa15.02□□□□□ -0.01
PABPC1-208ENST00000519004 ZNF579Q8NAF0 562 aaKnown RBP15.02□□□□□ -0.01
PABPC1-208ENST00000519004 TBC1D5Q92609 795 aa15.02□□□□□ -0.01
PABPC1-208ENST00000519004 GORASP1Q9BQQ3 440 aa15.02□□□□□ -0.01
PABPC1-208ENST00000519004 EPB41L5Q9HCM4 733 aa15.02□□□□□ -0.01
PABPC1-208ENST00000519004 PLCB1Q9NQ66 1216 aa15.02□□□□□ -0.01
PABPC1-208ENST00000519004 HYOU1Q9Y4L1 999 aa15.02□□□□□ -0.01
PABPC1-208ENST00000519004 A0A1B0GVG6 124 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 KCNJ18B7U540 433 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 HEXIM1O94992 359 aaKnown RBP15.01□□□□□ -0.01
PABPC1-208ENST00000519004 IMPDH2P12268 514 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 TCP1P17987 556 aaKnown RBP15.01□□□□□ -0.01
PABPC1-208ENST00000519004 CCND1P24385 295 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 CXCR5P32302 372 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 MAGEA8P43361 318 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 AFMP43652 599 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 SPAG1Q07617 926 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 USP4Q13107 963 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 KCNJ12Q14500 433 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 EPHA10Q5JZY3 1008 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 ANKRD20A2Q5SQ80 823 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 ANKRD20A1Q5TYW2 823 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 HHATQ5VTY9 493 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 ANKRD20A3Q5VUR7 823 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 CCDC170Q8IYT3 715 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 SPICE1Q8N0Z3 855 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 FAM81AQ8TBF8 368 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 CASKIN2Q8WXE0 1202 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 DBNDD2Q9BQY9 259 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 PIDD1Q9HB75 910 aa15.01□□□□□ -0.01
PABPC1-208ENST00000519004 CAPN11Q9UMQ6 739 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms