RNA–Protein interactions for RNA: ENST00000518236.1

FAM3B-206, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 2

Gene FAM3B, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-206ENST00000518236 TINF2Q9BSI4 451 aa12.73□□□□□ -0.37
FAM3B-206ENST00000518236 DSCC1Q9BVC3 393 aa12.73□□□□□ -0.37
FAM3B-206ENST00000518236 TOMM22Q9NS69 142 aa12.73□□□□□ -0.37
FAM3B-206ENST00000518236 RBM27Q9P2N5 1060 aaKnown RBP12.73□□□□□ -0.37
FAM3B-206ENST00000518236 PRR12Q9ULL5 1215 aa12.73□□□□□ -0.37
FAM3B-206ENST00000518236 COL11A1P12107 1806 aaPredicted RBP12.73□□□□□ -0.37
FAM3B-206ENST00000518236 FRMPD3Q5JV73 1810 aa12.73□□□□□ -0.37
FAM3B-206ENST00000518236 ZNF213O14771 459 aa12.72□□□□□ -0.37
FAM3B-206ENST00000518236 SNAI1O95863 264 aaPredicted RBP12.72□□□□□ -0.37
FAM3B-206ENST00000518236 FDX1P10109 184 aa12.72□□□□□ -0.37
FAM3B-206ENST00000518236 TOP1P11387 765 aaKnown RBP12.72□□□□□ -0.37
FAM3B-206ENST00000518236 LRRC26Q2I0M4 334 aa12.72□□□□□ -0.37
FAM3B-206ENST00000518236 BTNL9Q6UXG8 535 aa12.72□□□□□ -0.37
FAM3B-206ENST00000518236 C7orf61Q8IZ16 206 aa12.72□□□□□ -0.37
FAM3B-206ENST00000518236 CHST13Q8NET6 341 aa12.72□□□□□ -0.37
FAM3B-206ENST00000518236 DCAF4Q8WV16 495 aa12.72□□□□□ -0.37
FAM3B-206ENST00000518236 NRBP1Q9UHY1 535 aa12.72□□□□□ -0.37
FAM3B-206ENST00000518236 MYH4Q9Y623 1939 aa12.71□□□□□ -0.37
FAM3B-206ENST00000518236 DNM1LO00429 736 aa12.71□□□□□ -0.37
FAM3B-206ENST00000518236 SLC16A2P36021 539 aa12.71□□□□□ -0.37
FAM3B-206ENST00000518236 GJC2Q5T442 439 aaPredicted RBP12.71□□□□□ -0.37
FAM3B-206ENST00000518236 MAMDC4Q6UXC1 1216 aa12.71□□□□□ -0.37
FAM3B-206ENST00000518236 DDX11Q96FC9 970 aa12.71□□□□□ -0.37
FAM3B-206ENST00000518236 TTC14Q96N46 770 aa12.71□□□□□ -0.37
FAM3B-206ENST00000518236 RNF41Q9H4P4 317 aaPredicted RBP12.71□□□□□ -0.37
FAM3B-206ENST00000518236 ZMYND8Q9ULU4 1186 aaPredicted RBP12.71□□□□□ -0.37
FAM3B-206ENST00000518236 MTMR7Q9Y216 660 aa12.71□□□□□ -0.37
FAM3B-206ENST00000518236 SNHG28P0DPA3 235 aa12.7□□□□□ -0.38
FAM3B-206ENST00000518236 PDHBP11177 359 aa12.7□□□□□ -0.38
FAM3B-206ENST00000518236 CCDC174Q6PII3 467 aa12.7□□□□□ -0.38
FAM3B-206ENST00000518236 ZNF467Q7Z7K2 595 aaPredicted RBP12.7□□□□□ -0.38
FAM3B-206ENST00000518236 MSL3Q8N5Y2 521 aaKnown RBP12.7□□□□□ -0.38
FAM3B-206ENST00000518236 FAM133AQ8N9E0 248 aa12.7□□□□□ -0.38
FAM3B-206ENST00000518236 GDF15Q99988 308 aa12.7□□□□□ -0.38
FAM3B-206ENST00000518236 ZKSCAN3Q9BRR0 538 aa12.7□□□□□ -0.38
FAM3B-206ENST00000518236 SENP6Q9GZR1 1112 aaPredicted RBP12.7□□□□□ -0.38
FAM3B-206ENST00000518236 RANBP17Q9H2T7 1088 aaKnown RBP12.7□□□□□ -0.38
FAM3B-206ENST00000518236 A1CFQ9NQ94 594 aaKnown RBP12.7□□□□□ -0.38
FAM3B-206ENST00000518236 HOMER2Q9NSB8 354 aa12.7□□□□□ -0.38
FAM3B-206ENST00000518236 RNF146Q9NTX7 359 aa12.7□□□□□ -0.38
FAM3B-206ENST00000518236 FBXO40Q9UH90 709 aa12.7□□□□□ -0.38
FAM3B-206ENST00000518236 ISY1Q9ULR0 285 aaKnown RBP12.7□□□□□ -0.38
FAM3B-206ENST00000518236 CTDP1Q9Y5B0 961 aaPredicted RBP12.7□□□□□ -0.38
FAM3B-206ENST00000518236 DNAH12Q6ZR08 3092 aa12.7□□□□□ -0.38
FAM3B-206ENST00000518236 ASTN1O14525 1302 aa12.69□□□□□ -0.38
FAM3B-206ENST00000518236 FRMPD2Q68DX3 1309 aaPredicted RBP12.69□□□□□ -0.38
FAM3B-206ENST00000518236 SYNGAP1Q96PV0 1343 aa12.69□□□□□ -0.38
FAM3B-206ENST00000518236 KDM4AO75164 1064 aa12.69□□□□□ -0.38
FAM3B-206ENST00000518236 SYN1P17600 705 aa12.69□□□□□ -0.38
FAM3B-206ENST00000518236 CHMLP26374 656 aa12.69□□□□□ -0.38
FAM3B-206ENST00000518236 CNTN2Q02246 1040 aa12.69□□□□□ -0.38
FAM3B-206ENST00000518236 IKQ13123 557 aaPredicted RBP12.69□□□□□ -0.38
FAM3B-206ENST00000518236 LRRC41Q15345 812 aa12.69□□□□□ -0.38
FAM3B-206ENST00000518236 CCDC96Q2M329 555 aa12.69□□□□□ -0.38
FAM3B-206ENST00000518236 MUM1L1Q5H9M0 696 aa12.69□□□□□ -0.38
FAM3B-206ENST00000518236 DGKHQ86XP1 1220 aa12.69□□□□□ -0.38
FAM3B-206ENST00000518236 ANKRD35Q8N283 1001 aa12.69□□□□□ -0.38
FAM3B-206ENST00000518236 ARRDC4Q8NCT1 418 aa12.69□□□□□ -0.38
FAM3B-206ENST00000518236 ANKS1AQ92625 1134 aa12.69□□□□□ -0.38
FAM3B-206ENST00000518236 ESR2Q92731 530 aa12.69□□□□□ -0.38
FAM3B-206ENST00000518236 LENG1Q96BZ8 264 aaPredicted RBP12.69□□□□□ -0.38
FAM3B-206ENST00000518236 KATNBL1Q9H079 304 aa12.69□□□□□ -0.38
FAM3B-206ENST00000518236 ACAD9Q9H845 621 aa12.69□□□□□ -0.38
FAM3B-206ENST00000518236 GPCPD1Q9NPB8 672 aa12.69□□□□□ -0.38
FAM3B-206ENST00000518236 ZSWIM5Q9P217 1185 aa12.69□□□□□ -0.38
FAM3B-206ENST00000518236 SOWAHBA6NEL2 793 aa12.68□□□□□ -0.38
FAM3B-206ENST00000518236 B4E1Z4 1266 aa12.68□□□□□ -0.38
FAM3B-206ENST00000518236 ALAS1P13196 640 aa12.68□□□□□ -0.38
FAM3B-206ENST00000518236 ATN1P54259 1190 aaPredicted RBP12.68□□□□□ -0.38
FAM3B-206ENST00000518236 PTH1RQ03431 593 aa12.68□□□□□ -0.38
FAM3B-206ENST00000518236 ZNF543Q08ER8 600 aa12.68□□□□□ -0.38
FAM3B-206ENST00000518236 TKFCQ3LXA3 575 aa12.68□□□□□ -0.38
FAM3B-206ENST00000518236 SYDE2Q5VT97 1194 aa12.68□□□□□ -0.38
FAM3B-206ENST00000518236 DCBLD2Q96PD2 775 aa12.68□□□□□ -0.38
FAM3B-206ENST00000518236 TRERF1Q96PN7 1200 aa12.68□□□□□ -0.38
FAM3B-206ENST00000518236 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.68□□□□□ -0.38
FAM3B-206ENST00000518236 CTNNA3Q9UI47 895 aa12.68□□□□□ -0.38
FAM3B-206ENST00000518236 CNPY2Q9Y2B0 182 aa12.68□□□□□ -0.38
FAM3B-206ENST00000518236 ZNFX1Q9P2E3 1918 aaKnown RBP12.68□□□□□ -0.38
FAM3B-206ENST00000518236 RAD50Q92878 1312 aa12.67□□□□□ -0.38
FAM3B-206ENST00000518236 ADCY6O43306 1168 aa12.67□□□□□ -0.38
FAM3B-206ENST00000518236 ADAMTS4O75173 837 aa12.67□□□□□ -0.38
FAM3B-206ENST00000518236 PGK1P00558 417 aa12.67□□□□□ -0.38
FAM3B-206ENST00000518236 ICAM1P05362 532 aa12.67□□□□□ -0.38
FAM3B-206ENST00000518236 RARBP10826 455 aa12.67□□□□□ -0.38
FAM3B-206ENST00000518236 AKR1A1P14550 325 aa12.67□□□□□ -0.38
FAM3B-206ENST00000518236 NT5C2P49902 561 aa12.67□□□□□ -0.38
FAM3B-206ENST00000518236 IMMTQ16891 758 aaKnown RBP12.67□□□□□ -0.38
FAM3B-206ENST00000518236 SLC39A5Q6ZMH5 540 aa12.67□□□□□ -0.38
FAM3B-206ENST00000518236 ARMCX2Q7L311 632 aa12.67□□□□□ -0.38
FAM3B-206ENST00000518236 PURBQ96QR8 312 aaKnown RBP12.67□□□□□ -0.38
FAM3B-206ENST00000518236 XPNPEP3Q9NQH7 507 aa12.67□□□□□ -0.38
FAM3B-206ENST00000518236 CYP39A1Q9NYL5 469 aa12.67□□□□□ -0.38
FAM3B-206ENST00000518236 DDX49Q9Y6V7 483 aaKnown RBP12.67□□□□□ -0.38
FAM3B-206ENST00000518236 COL6A3P12111 3177 aa12.67□□□□□ -0.38
FAM3B-206ENST00000518236 SGSM2O43147 1006 aa12.66□□□□□ -0.38
FAM3B-206ENST00000518236 GOLGA8HP0CJ92 632 aa12.66□□□□□ -0.38
FAM3B-206ENST00000518236 BMP8BP34820 402 aa12.66□□□□□ -0.38
FAM3B-206ENST00000518236 ADCYAP1R1P41586 468 aa12.66□□□□□ -0.38
FAM3B-206ENST00000518236 MAGEA10P43363 369 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms