RNA–Protein interactions for RNA: ENST00000518146.5

NSMCE2-205, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-205ENST00000518146 ERC1Q8IUD2 1116 aa10.88□□□□□ -0.67
NSMCE2-205ENST00000518146 PCSK9Q8NBP7 692 aaKnown RBP10.88□□□□□ -0.67
NSMCE2-205ENST00000518146 REPS2Q8NFH8 660 aa10.88□□□□□ -0.67
NSMCE2-205ENST00000518146 GOPCQ9HD26 462 aa10.88□□□□□ -0.67
NSMCE2-205ENST00000518146 MSRAQ9UJ68 235 aa10.88□□□□□ -0.67
NSMCE2-205ENST00000518146 ZHX1Q9UKY1 873 aaPredicted RBP10.88□□□□□ -0.67
NSMCE2-205ENST00000518146 TRANK1O15050 2925 aa10.88□□□□□ -0.67
NSMCE2-205ENST00000518146 A0A0U1RQG5 324 aaPredicted RBP10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 APBB1O00213 710 aa10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 RAD21O60216 631 aa10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 SNAI1O95863 264 aaPredicted RBP10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 ASGR1P07306 291 aa10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 C6orf222P0C671 652 aaPredicted RBP10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 ACRP10323 421 aa10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 EEF2P13639 858 aaKnown RBP10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 IGFBP4P22692 258 aa10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 CCDC85BQ15834 202 aaPredicted RBP10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 FAM83BQ5T0W9 1011 aa10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 MAMDC4Q6UXC1 1216 aa10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 ZNF365Q70YC5 407 aa10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 AMOTL1Q8IY63 956 aa10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 FAM122AQ96E09 287 aa10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 DNAJC2Q99543 621 aaKnown RBP10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 TEX13BQ9BXU2 312 aa10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 ARMT1Q9H993 441 aa10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 KANSL2Q9H9L4 492 aa10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 SPC25Q9HBM1 224 aa10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 ATP8A2Q9NTI2 1148 aa10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 EXOC6BQ9Y2D4 811 aa10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 MYO9BQ13459 2157 aa10.87□□□□□ -0.67
NSMCE2-205ENST00000518146 ARVCFO00192 962 aa10.86□□□□□ -0.67
NSMCE2-205ENST00000518146 GOLIM4O00461 696 aa10.86□□□□□ -0.67
NSMCE2-205ENST00000518146 TLR3O15455 904 aaKnown RBP10.86□□□□□ -0.67
NSMCE2-205ENST00000518146 CDK8P49336 464 aa10.86□□□□□ -0.67
NSMCE2-205ENST00000518146 SNRNP48Q6IEG0 339 aaKnown RBP10.86□□□□□ -0.67
NSMCE2-205ENST00000518146 C16orf86Q6ZW13 317 aa10.86□□□□□ -0.67
NSMCE2-205ENST00000518146 ITPRIPQ8IWB1 547 aa10.86□□□□□ -0.67
NSMCE2-205ENST00000518146 FAM126BQ8IXS8 530 aa10.86□□□□□ -0.67
NSMCE2-205ENST00000518146 FTSJ3Q8IY81 847 aaKnown RBP10.86□□□□□ -0.67
NSMCE2-205ENST00000518146 EFCAB3Q8N7B9 438 aa10.86□□□□□ -0.67
NSMCE2-205ENST00000518146 VTI1AQ96AJ9 217 aa10.86□□□□□ -0.67
NSMCE2-205ENST00000518146 DDX11Q96FC9 970 aa10.86□□□□□ -0.67
NSMCE2-205ENST00000518146 SLF1Q9BQI6 1058 aa10.86□□□□□ -0.67
NSMCE2-205ENST00000518146 PPP1R12CQ9BZL4 782 aa10.86□□□□□ -0.67
NSMCE2-205ENST00000518146 UPF3AQ9H1J1 476 aaKnown RBP10.86□□□□□ -0.67
NSMCE2-205ENST00000518146 MTIF3Q9H2K0 278 aaKnown RBP10.86□□□□□ -0.67
NSMCE2-205ENST00000518146 SLC28A3Q9HAS3 691 aa10.86□□□□□ -0.67
NSMCE2-205ENST00000518146 IL1RAPL2Q9NP60 686 aa10.86□□□□□ -0.67
NSMCE2-205ENST00000518146 BAZ2AQ9UIF9 1905 aaKnown RBP10.86□□□□□ -0.67
NSMCE2-205ENST00000518146 DNAJC25-GNG10A0A024R161 153 aa10.85□□□□□ -0.67
NSMCE2-205ENST00000518146 CYP2D7A0A087X1C5 515 aa10.85□□□□□ -0.67
NSMCE2-205ENST00000518146 SMIM22K7EJ46 135 aa10.85□□□□□ -0.67
NSMCE2-205ENST00000518146 ADCY6O43306 1168 aa10.85□□□□□ -0.67
NSMCE2-205ENST00000518146 PRKAB2O43741 272 aa10.85□□□□□ -0.67
NSMCE2-205ENST00000518146 MBD4O95243 580 aa10.85□□□□□ -0.67
NSMCE2-205ENST00000518146 GJA9P57773 515 aa10.85□□□□□ -0.67
NSMCE2-205ENST00000518146 ACVR2BQ13705 512 aa10.85□□□□□ -0.67
NSMCE2-205ENST00000518146 CCDC144BQ3MJ40 725 aa10.85□□□□□ -0.67
NSMCE2-205ENST00000518146 C12orf60Q5U649 245 aa10.85□□□□□ -0.67
NSMCE2-205ENST00000518146 CEP85Q6P2H3 762 aa10.85□□□□□ -0.67
NSMCE2-205ENST00000518146 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.85□□□□□ -0.67
NSMCE2-205ENST00000518146 HERVK_113Q902F9 699 aa10.85□□□□□ -0.67
NSMCE2-205ENST00000518146 NKX2-4Q9H2Z4 354 aa10.85□□□□□ -0.67
NSMCE2-205ENST00000518146 IL23AQ9NPF7 189 aa10.85□□□□□ -0.67
NSMCE2-205ENST00000518146 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.85□□□□□ -0.67
NSMCE2-205ENST00000518146 CXXC1Q9P0U4 656 aaPredicted RBP10.85□□□□□ -0.67
NSMCE2-205ENST00000518146 USP17L12C9JPN9 530 aa10.84□□□□□ -0.67
NSMCE2-205ENST00000518146 USP17L21D6R901 530 aa10.84□□□□□ -0.67
NSMCE2-205ENST00000518146 CD4P01730 458 aa10.84□□□□□ -0.67
NSMCE2-205ENST00000518146 FGBP02675 491 aa10.84□□□□□ -0.67
NSMCE2-205ENST00000518146 HOXB1P14653 301 aaPredicted RBP10.84□□□□□ -0.67
NSMCE2-205ENST00000518146 CYP2C18P33260 490 aa10.84□□□□□ -0.67
NSMCE2-205ENST00000518146 HSP90AB4PQ58FF6 505 aa10.84□□□□□ -0.67
NSMCE2-205ENST00000518146 GNASQ5JWF2 1037 aa10.84□□□□□ -0.67
NSMCE2-205ENST00000518146 DDRGK1Q96HY6 314 aa10.84□□□□□ -0.67
NSMCE2-205ENST00000518146 NUP88Q99567 741 aaPredicted RBP10.84□□□□□ -0.67
NSMCE2-205ENST00000518146 C1QTNF1Q9BXJ1 281 aa10.84□□□□□ -0.67
NSMCE2-205ENST00000518146 ABHD16BQ9H3Z7 469 aa10.84□□□□□ -0.67
NSMCE2-205ENST00000518146 YBX2Q9Y2T7 364 aaKnown RBP10.84□□□□□ -0.67
NSMCE2-205ENST00000518146 RIPK3Q9Y572 518 aa10.84□□□□□ -0.67
NSMCE2-205ENST00000518146 GBF1Q92538 1859 aa10.84□□□□□ -0.67
NSMCE2-205ENST00000518146 ATP2A1O14983 1001 aa10.83□□□□□ -0.68
NSMCE2-205ENST00000518146 ADD2P35612 726 aa10.83□□□□□ -0.68
NSMCE2-205ENST00000518146 SLC4A3P48751 1232 aa10.83□□□□□ -0.68
NSMCE2-205ENST00000518146 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.83□□□□□ -0.68
NSMCE2-205ENST00000518146 ARMCX2Q7L311 632 aa10.83□□□□□ -0.68
NSMCE2-205ENST00000518146 CLASRPQ8N2M8 674 aaKnown RBP10.83□□□□□ -0.68
NSMCE2-205ENST00000518146 PRPF38AQ8NAV1 312 aaKnown RBP10.83□□□□□ -0.68
NSMCE2-205ENST00000518146 RHPN1Q8TCX5 695 aa10.83□□□□□ -0.68
NSMCE2-205ENST00000518146 NECAB3Q96P71 396 aaPredicted RBP10.83□□□□□ -0.68
NSMCE2-205ENST00000518146 HIPK3Q9H422 1215 aa10.83□□□□□ -0.68
NSMCE2-205ENST00000518146 GREB1LQ9C091 1923 aaPredicted RBP10.83□□□□□ -0.68
NSMCE2-205ENST00000518146 ZBED9Q6R2W3 1325 aa10.83□□□□□ -0.68
NSMCE2-205ENST00000518146 CTAGE5O15320 804 aa10.82□□□□□ -0.68
NSMCE2-205ENST00000518146 ZBED4O75132 1171 aa10.82□□□□□ -0.68
NSMCE2-205ENST00000518146 NDUFB10O96000 172 aa10.82□□□□□ -0.68
NSMCE2-205ENST00000518146 RLBP1P12271 317 aa10.82□□□□□ -0.68
NSMCE2-205ENST00000518146 NKX3-2P78367 333 aa10.82□□□□□ -0.68
NSMCE2-205ENST00000518146 AAK1Q2M2I8 961 aa10.82□□□□□ -0.68
NSMCE2-205ENST00000518146 SLFNL1Q499Z3 407 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms