RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 C8orf48Q96LL4 319 aa4.59□□□□□ -1.67
RNU6-840P-201ENST00000517275 DUSP23Q9BVJ7 150 aa4.59□□□□□ -1.67
RNU6-840P-201ENST00000517275 NOL6Q9H6R4 1146 aaKnown RBP4.59□□□□□ -1.67
RNU6-840P-201ENST00000517275 NDOR1Q9UHB4 597 aa4.59□□□□□ -1.67
RNU6-840P-201ENST00000517275 KCNH3Q9ULD8 1083 aa4.59□□□□□ -1.67
RNU6-840P-201ENST00000517275 APOBEC2Q9Y235 224 aaKnown RBP4.59□□□□□ -1.67
RNU6-840P-201ENST00000517275 ARVCFO00192 962 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 DYNC1LI2O43237 492 aaPredicted RBP4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 SART1O43290 800 aaKnown RBP4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 ZEB2O60315 1214 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 APBA3O96018 575 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 SNRPB2P08579 225 aaKnown RBP4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 NFICP08651 508 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 GLB1P16278 677 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 MAP4P27816 1152 aaKnown RBP4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 FLT3P36888 993 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 USP11P51784 963 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 POU4F1Q01851 419 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 SEPT7Q16181 437 aaKnown RBP4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 NFE2Q16621 373 aaPredicted RBP4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 NOL9Q5SY16 702 aaKnown RBP4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 RCSD1Q6JBY9 416 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 ZCCHC8Q6NZY4 707 aaKnown RBP4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 DDX46Q7L014 1031 aaKnown RBP4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 SPATS2Q86XZ4 545 aaKnown RBP4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 DAGLBQ8NCG7 672 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 GIMAP7Q8NHV1 300 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 WFDC12Q8WWY7 111 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 GATA6Q92908 595 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 CAMKK2Q96RR4 588 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 ASPSCR1Q9BZE9 553 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 GPR62Q9BZJ7 368 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 MTFR1LQ9H019 292 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 PRDM5Q9NQX1 630 aaPredicted RBP4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 GPR27Q9NS67 375 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 CHST7Q9NS84 486 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 GFOD1Q9NXC2 390 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 FBXL21Q9UKT6 434 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 RNF112Q9ULX5 631 aa4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 TNPO3Q9Y5L0 923 aaKnown RBP4.58□□□□□ -1.68
RNU6-840P-201ENST00000517275 WASHC2CQ9Y4E1 1318 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 H0Y8X5 98 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 AURKAO14965 403 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 PRAMEF1O95521 474 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 BMP8BP34820 402 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 CTSKP43235 329 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 GPR85P60893 370 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 NMIQ13287 307 aaPredicted RBP4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 KCNAB2Q13303 367 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 ZNF460Q14592 562 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 TTF1Q15361 905 aaPredicted RBP4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 SF1Q15637 639 aaKnown RBP4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 GRIK4Q16099 956 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 SFRP5Q5T4F7 317 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 DENND5AQ6IQ26 1287 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 PODNQ7Z5L7 613 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 TMC3Q7Z5M5 1100 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 STRA8Q7Z7C7 330 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 TOP6BLQ8N6T0 577 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 ZNF655Q8N720 491 aaPredicted RBP4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 FBLIM1Q8WUP2 373 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 BRF1Q92994 677 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 MAGEB10Q96LZ2 347 aaPredicted RBP4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 SSBP4Q9BWG4 385 aaPredicted RBP4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 PUS7LQ9H0K6 701 aaKnown RBP4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 BACE2Q9Y5Z0 518 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 EID1Q9Y6B2 187 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 CAPN6Q9Y6Q1 641 aa4.57□□□□□ -1.68
RNU6-840P-201ENST00000517275 ASXL2Q76L83 1435 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 FAM95CA0A1B0GW59 222 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 OPA1O60313 960 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 ALDH1L1O75891 902 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 ALX3O95076 343 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 KCNA6P17658 529 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 ENDOUP21128 410 aaKnown RBP4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 LORP23490 312 aaPredicted RBP4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 MCL1Q07820 350 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 SCRN1Q12765 414 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 CDK5R2Q13319 367 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 STAT4Q14765 748 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 CNNM4Q6P4Q7 775 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 PAOXQ6QHF9 649 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 TREML4Q6UXN2 200 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 TXNRD3Q86VQ6 643 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 BEND7Q8N7W2 519 aaPredicted RBP4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 FRS2Q8WU20 508 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 UTP4Q969X6 686 aaKnown RBP4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 MEGF10Q96KG7 1140 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 ZDHHC15Q96MV8 337 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 MCMBPQ9BTE3 642 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 DSCC1Q9BVC3 393 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 CELF4Q9BZC1 486 aaKnown RBP4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 IFT22Q9H7X7 185 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 MKNK2Q9HBH9 465 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 GTF2IRD1Q9UHL9 959 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 USP21Q9UK80 565 aa4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 TPX2Q9ULW0 747 aaKnown RBP4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 GPR55Q9Y2T6 319 aaPredicted RBP4.56□□□□□ -1.68
RNU6-840P-201ENST00000517275 TRBV23OR9-2A0A075B6M9 112 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms