RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.91□□□□□ -0.82
SCARNA20.3-201ENST00000516913 UPF3AQ9H1J1 476 aaKnown RBP9.91□□□□□ -0.82
SCARNA20.3-201ENST00000516913 GOPCQ9HD26 462 aa9.91□□□□□ -0.82
SCARNA20.3-201ENST00000516913 CXXC1Q9P0U4 656 aaPredicted RBP9.91□□□□□ -0.82
SCARNA20.3-201ENST00000516913 ARPP21Q9UBL0 812 aaPredicted RBP9.91□□□□□ -0.82
SCARNA20.3-201ENST00000516913 SYNGAP1Q96PV0 1343 aa9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 PATL2C9JE40 543 aaKnown RBP9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 ASGR1P07306 291 aa9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 AKR1A1P14550 325 aa9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 NOVP48745 357 aa9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 NKX3-2P78367 333 aa9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 SMAD3P84022 425 aaKnown RBP9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 ADGRE1Q14246 886 aa9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 TMEM240Q5SV17 173 aa9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 SLFN13Q68D06 897 aa9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 TAPT1Q6NXT6 567 aa9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 KCTD1Q719H9 257 aa9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 ARMCX2Q7L311 632 aa9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 PRPF38AQ8NAV1 312 aaKnown RBP9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 SLC43A3Q8NBI5 491 aa9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 TOX2Q96NM4 488 aa9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 SH2D4AQ9H788 454 aa9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 A1CFQ9NQ94 594 aaKnown RBP9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 HOMER2Q9NSB8 354 aa9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 ZHX1Q9UKY1 873 aaPredicted RBP9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 GNEQ9Y223 722 aaKnown RBP9.9□□□□□ -0.82
SCARNA20.3-201ENST00000516913 MCM3APO60318 1980 aa9.9□□□□□ -0.83
SCARNA20.3-201ENST00000516913 PLIN4Q96Q06 1357 aa9.89□□□□□ -0.83
SCARNA20.3-201ENST00000516913 TMEM232C9JQI7 657 aa9.89□□□□□ -0.83
SCARNA20.3-201ENST00000516913 DUSP11O75319 330 aaKnown RBP9.89□□□□□ -0.83
SCARNA20.3-201ENST00000516913 TIMP1P01033 207 aa9.89□□□□□ -0.83
SCARNA20.3-201ENST00000516913 CD4P01730 458 aa9.89□□□□□ -0.83
SCARNA20.3-201ENST00000516913 CSF2RAP15509 400 aa9.89□□□□□ -0.83
SCARNA20.3-201ENST00000516913 SMPD1P17405 629 aa9.89□□□□□ -0.83
SCARNA20.3-201ENST00000516913 MCCP23508 829 aa9.89□□□□□ -0.83
SCARNA20.3-201ENST00000516913 CST5P28325 142 aaPredicted RBP9.89□□□□□ -0.83
SCARNA20.3-201ENST00000516913 CYP2C18P33260 490 aa9.89□□□□□ -0.83
SCARNA20.3-201ENST00000516913 GJA9P57773 515 aa9.89□□□□□ -0.83
SCARNA20.3-201ENST00000516913 TFAP4Q01664 338 aa9.89□□□□□ -0.83
SCARNA20.3-201ENST00000516913 FAM126BQ8IXS8 530 aa9.89□□□□□ -0.83
SCARNA20.3-201ENST00000516913 GMCL1P1Q8NEA9 526 aa9.89□□□□□ -0.83
SCARNA20.3-201ENST00000516913 MAFAQ8NHW3 353 aaPredicted RBP9.89□□□□□ -0.83
SCARNA20.3-201ENST00000516913 TSEN34Q9BSV6 310 aaKnown RBP9.89□□□□□ -0.83
SCARNA20.3-201ENST00000516913 MKNK2Q9HBH9 465 aa9.89□□□□□ -0.83
SCARNA20.3-201ENST00000516913 TMEM39AQ9NV64 488 aa9.89□□□□□ -0.83
SCARNA20.3-201ENST00000516913 PLXNA1Q9UIW2 1896 aa9.88□□□□□ -0.83
SCARNA20.3-201ENST00000516913 ARHGEF15O94989 841 aa9.88□□□□□ -0.83
SCARNA20.3-201ENST00000516913 FGRP09769 529 aa9.88□□□□□ -0.83
SCARNA20.3-201ENST00000516913 MS4A1P11836 297 aa9.88□□□□□ -0.83
SCARNA20.3-201ENST00000516913 BMP3P12645 472 aa9.88□□□□□ -0.83
SCARNA20.3-201ENST00000516913 PPARAQ07869 468 aa9.88□□□□□ -0.83
SCARNA20.3-201ENST00000516913 ZNF697Q5TEC3 545 aa9.88□□□□□ -0.83
SCARNA20.3-201ENST00000516913 RCSD1Q6JBY9 416 aa9.88□□□□□ -0.83
SCARNA20.3-201ENST00000516913 CXCL17Q6UXB2 119 aa9.88□□□□□ -0.83
SCARNA20.3-201ENST00000516913 ZNF467Q7Z7K2 595 aaPredicted RBP9.88□□□□□ -0.83
SCARNA20.3-201ENST00000516913 RNF180Q86T96 592 aa9.88□□□□□ -0.83
SCARNA20.3-201ENST00000516913 RNPC3Q96LT9 517 aaKnown RBP9.88□□□□□ -0.83
SCARNA20.3-201ENST00000516913 PBX4Q9BYU1 374 aa9.88□□□□□ -0.83
SCARNA20.3-201ENST00000516913 TRPV6Q9H1D0 765 aa9.88□□□□□ -0.83
SCARNA20.3-201ENST00000516913 STARD7Q9NQZ5 370 aa9.88□□□□□ -0.83
SCARNA20.3-201ENST00000516913 SLC5A4Q9NY91 659 aa9.88□□□□□ -0.83
SCARNA20.3-201ENST00000516913 FAM184BQ9ULE4 1060 aa9.88□□□□□ -0.83
SCARNA20.3-201ENST00000516913 YBX2Q9Y2T7 364 aaKnown RBP9.88□□□□□ -0.83
SCARNA20.3-201ENST00000516913 ARVCFO00192 962 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 TTLL1O95922 423 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 C6orf222P0C671 652 aaPredicted RBP9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 MYOGP15173 224 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 RAG1P15918 1043 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 DNAJB2P25686 324 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 SLC16A2P36021 539 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 PSMC6P62333 389 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 FPGSQ05932 587 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 MFSD5Q6N075 450 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 ZSCAN25Q6NSZ9 544 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 ZNF365Q70YC5 407 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 SPRED2Q7Z698 418 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 ZNF589Q86UQ0 364 aaPredicted RBP9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 MSL3Q8N5Y2 521 aaKnown RBP9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 DDX11Q96FC9 970 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 FAM227BQ96M60 508 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 PPP1R12CQ9BZL4 782 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 WNT8AQ9H1J5 351 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 CPVLQ9H3G5 476 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 PRKAG2Q9UGJ0 569 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 FEM1BQ9UK73 627 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 PRR12Q9ULL5 1215 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 CNPY2Q9Y2B0 182 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 LCTP09848 1927 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 MYH7P12883 1935 aa9.87□□□□□ -0.83
SCARNA20.3-201ENST00000516913 ELP1O95163 1332 aa9.86□□□□□ -0.83
SCARNA20.3-201ENST00000516913 MYH8P13535 1937 aa9.86□□□□□ -0.83
SCARNA20.3-201ENST00000516913 A0A0D9SFI3 127 aa9.86□□□□□ -0.83
SCARNA20.3-201ENST00000516913 NFIBO00712 420 aa9.86□□□□□ -0.83
SCARNA20.3-201ENST00000516913 ZBED4O75132 1171 aa9.86□□□□□ -0.83
SCARNA20.3-201ENST00000516913 APPP05067 770 aa9.86□□□□□ -0.83
SCARNA20.3-201ENST00000516913 TDO2P48775 406 aa9.86□□□□□ -0.83
SCARNA20.3-201ENST00000516913 GNASQ5JWF2 1037 aa9.86□□□□□ -0.83
SCARNA20.3-201ENST00000516913 CCDC174Q6PII3 467 aa9.86□□□□□ -0.83
SCARNA20.3-201ENST00000516913 EEPD1Q7L9B9 569 aa9.86□□□□□ -0.83
SCARNA20.3-201ENST00000516913 FBXO16Q8IX29 292 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms