RNA–Protein interactions for RNA: ENST00000516381.1

SCARNA17.3-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 125 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.3-201ENST00000516381 GRK4P32298 578 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 CEBPAP49715 358 aaPredicted RBP0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 FCGRTP55899 365 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 PRR5P85299 388 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 PTPN11Q06124 597 aaPredicted RBP0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 MTMR3Q13615 1198 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 CLEC16AQ2KHT3 1053 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 RASIP1Q5U651 963 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 FNDC7Q5VTL7 733 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 ALKBH2Q6NS38 261 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 PAQR3Q6TCH7 311 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 PDZRN4Q6ZMN7 1036 aaPredicted RBP0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 DTHD1Q6ZMT9 781 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 Q6ZPA2 131 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 HDXQ7Z353 690 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 SLCO6A1Q86UG4 719 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 MRPL41Q8IXM3 137 aaKnown RBP0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 C9orf106Q8NAJ2 232 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 TXNDC5Q8NBS9 432 aaKnown RBP0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 SMARCC2Q8TAQ2 1214 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 STK32AQ8WU08 396 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 DDX11Q96FC9 970 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 EAF1Q96JC9 268 aaPredicted RBP0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 LCORQ96JN0 433 aaPredicted RBP0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 BCAS3Q9H6U6 928 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 JADE2Q9NQC1 790 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 CCDC87Q9NVE4 849 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 IMPACTQ9P2X3 320 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 TNFRSF10DQ9UBN6 386 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 TJP2Q9UDY2 1190 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 TCFL5Q9UL49 500 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 ZMIZ1Q9ULJ6 1067 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 CEP131Q9UPN4 1083 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 TRAK1Q9UPV9 953 aa0.8□□□□□ -2.28
SCARNA17.3-201ENST00000516381 F8W031 263 aaPredicted RBP0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 ENC1O14682 589 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 SRGAP3O43295 1099 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 FOXS1O43638 330 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 RAD21O60216 631 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 SMARCA5O60264 1052 aaPredicted RBP0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 NUDT3O95989 172 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 CYBBP04839 570 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 DBHP09172 617 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 KRT10P13645 584 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 PMLP29590 882 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 THBS2P35442 1172 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 EPHB4P54760 987 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 PPP2CBP62714 309 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 PPP2CAP67775 309 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 MAPK7Q13164 816 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 ORC1Q13415 861 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 BBS9Q3SYG4 887 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 HS1BP3Q53T59 392 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 WIPI1Q5MNZ9 446 aaPredicted RBP0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 LLGL2Q6P1M3 1020 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 SYCE2Q6PIF2 218 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 GAREM2Q75VX8 874 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 PLEKHH3Q7Z736 793 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 LINC00482Q8N8I6 264 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 LINC00116Q8NCU8 138 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 SPATA3Q8NHX4 192 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 SYTL5Q8TDW5 730 aaPredicted RBP0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 CACTINQ8WUQ7 758 aaKnown RBP0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 ALG3Q92685 438 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 TCTN2Q96GX1 697 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 TMEM87BQ96K49 555 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 FCRL2Q96LA5 508 aaPredicted RBP0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 PLEKHG4BQ96PX9 1271 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 ADOQ96SZ5 270 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 SYT3Q9BQG1 590 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 TTPALQ9BTX7 342 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 HDAC8Q9BY41 377 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 MEGF9Q9H1U4 602 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 SALL3Q9BXA9 1300 aa0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 SETD1BQ9UPS6 1966 aaKnown RBP0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 ARHGEF17Q96PE2 2063 aaPredicted RBP0.79□□□□□ -2.28
SCARNA17.3-201ENST00000516381 A0A1W2PQ45 241 aaPredicted RBP0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 A0A1W2PQY0 241 aa0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 SSU72P8A0A1W2PR75 194 aa0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 C9orf118A6NHY6 69 aa0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 DDX3XO00571 662 aaKnown RBP eCLIP0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 FOXN1O15353 648 aa0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 CPNE3O75131 537 aaKnown RBP0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 SYPP08247 313 aa0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 NPR3P17342 541 aa0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 HOXB6P17509 224 aaKnown RBP0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 MAKP20794 623 aa0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 PCBP3P57721 371 aaKnown RBP0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 CACNB2Q08289 660 aaPredicted RBP0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 FSTL1Q12841 308 aa0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 NMIQ13287 307 aaPredicted RBP0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 TUBA3CQ13748 450 aa0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 CFAP70Q5T0N1 1121 aa0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 SLFN13Q68D06 897 aa0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 SLC6A19Q695T7 634 aa0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 TCTN3Q6NUS6 607 aa0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 TUBA3EQ6PEY2 450 aa0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 ARHGEF18Q6ZSZ5 1173 aa0.78□□□□□ -2.28
SCARNA17.3-201ENST00000516381 PRIMA1Q86XR5 153 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms